RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 LINC00862A6NCI5 91 aa12.25□□□□□ -0.45
TPM4-204ENST00000586499 PANO1I0J062 215 aa12.25□□□□□ -0.45
TPM4-204ENST00000586499 CNBPP62633 177 aaKnown RBP12.25□□□□□ -0.45
TPM4-204ENST00000586499 SDIM1Q6ZPB5 146 aa12.25□□□□□ -0.45
TPM4-204ENST00000586499 MRPL52Q86TS9 123 aaKnown RBP12.25□□□□□ -0.45
TPM4-204ENST00000586499 CDC42SE2Q9NRR3 84 aa12.25□□□□□ -0.45
TPM4-204ENST00000586499 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.25□□□□□ -0.45
TPM4-204ENST00000586499 D6R8Y8 96 aa12.24□□□□□ -0.45
TPM4-204ENST00000586499 TNFRSF6BO95407 300 aa12.24□□□□□ -0.45
TPM4-204ENST00000586499 XCL1P47992 114 aa12.24□□□□□ -0.45
TPM4-204ENST00000586499 FOXI1Q12951 378 aa12.24□□□□□ -0.45
TPM4-204ENST00000586499 HIGD2BQ4VC39 106 aa12.24□□□□□ -0.45
TPM4-204ENST00000586499 CLLU1Q5K131 121 aa12.24□□□□□ -0.45
TPM4-204ENST00000586499 AP5S1Q9NUS5 200 aa12.24□□□□□ -0.45
TPM4-204ENST00000586499 TRBV24-1A0A075B6N3 115 aa12.23□□□□□ -0.45
TPM4-204ENST00000586499 F8W036 122 aa12.23□□□□□ -0.45
TPM4-204ENST00000586499 PPP1R2P9O14990 202 aa12.23□□□□□ -0.45
TPM4-204ENST00000586499 CCL25O15444 150 aa12.23□□□□□ -0.45
TPM4-204ENST00000586499 IFITM2Q01629 132 aa12.23□□□□□ -0.45
TPM4-204ENST00000586499 ZNF664Q8N3J9 261 aa12.23□□□□□ -0.45
TPM4-204ENST00000586499 KIR2DL4Q99706 377 aa12.23□□□□□ -0.45
TPM4-204ENST00000586499 C20orf78Q9BR46 151 aa12.23□□□□□ -0.45
TPM4-204ENST00000586499 MYCBP2O75592 4640 aa12.22□□□□□ -0.45
TPM4-204ENST00000586499 PLA2G1BP04054 148 aaKnown RBP12.22□□□□□ -0.45
TPM4-204ENST00000586499 S100A8P05109 93 aa12.22□□□□□ -0.45
TPM4-204ENST00000586499 CFAP161Q6P656 301 aa12.22□□□□□ -0.45
TPM4-204ENST00000586499 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.45
TPM4-204ENST00000586499 NPYP01303 97 aa12.21□□□□□ -0.45
TPM4-204ENST00000586499 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.45
TPM4-204ENST00000586499 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
TPM4-204ENST00000586499 UBE2D4Q9Y2X8 147 aa12.21□□□□□ -0.45
TPM4-204ENST00000586499 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.2□□□□□ -0.46
TPM4-204ENST00000586499 MT-ND4LP03901 98 aa12.19□□□□□ -0.46
TPM4-204ENST00000586499 RPL32P62910 135 aaKnown RBP12.19□□□□□ -0.46
TPM4-204ENST00000586499 SS18Q15532 418 aa12.19□□□□□ -0.46
TPM4-204ENST00000586499 ATP5L2Q7Z4Y8 100 aa12.19□□□□□ -0.46
TPM4-204ENST00000586499 ANAPC16Q96DE5 110 aa12.19□□□□□ -0.46
TPM4-204ENST00000586499 SMIM2Q9BVW6 85 aa12.19□□□□□ -0.46
TPM4-204ENST00000586499 IGHV3-64A0A075B6Q5 118 aa12.18□□□□□ -0.46
TPM4-204ENST00000586499 KRTAP10-4P60372 401 aaPredicted RBP12.18□□□□□ -0.46
TPM4-204ENST00000586499 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
TPM4-204ENST00000586499 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
TPM4-204ENST00000586499 GVQW2A0A096LPI5 108 aaPredicted RBP12.17□□□□□ -0.46
TPM4-204ENST00000586499 TCAPO15273 167 aa12.17□□□□□ -0.46
TPM4-204ENST00000586499 CHTF8P0CG12 524 aa12.17□□□□□ -0.46
TPM4-204ENST00000586499 Q6ZUT4 128 aa12.17□□□□□ -0.46
TPM4-204ENST00000586499 LINC00526Q96FQ7 95 aa12.17□□□□□ -0.46
TPM4-204ENST00000586499 PPBPP02775 128 aa12.16□□□□□ -0.46
TPM4-204ENST00000586499 CD164L2Q6UWJ8 174 aa12.16□□□□□ -0.46
TPM4-204ENST00000586499 TMEM136Q6ZRR5 245 aa12.16□□□□□ -0.46
TPM4-204ENST00000586499 ORMDL3Q8N138 153 aa12.16□□□□□ -0.46
TPM4-204ENST00000586499 PHOX2AO14813 284 aa12.15□□□□□ -0.46
TPM4-204ENST00000586499 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
TPM4-204ENST00000586499 PRELID3AQ96N28 172 aa12.15□□□□□ -0.46
TPM4-204ENST00000586499 TRAV13-1A0A0B4J241 112 aa12.14□□□□□ -0.47
TPM4-204ENST00000586499 COX6A2Q02221 97 aa12.14□□□□□ -0.47
TPM4-204ENST00000586499 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
TPM4-204ENST00000586499 CIRBPQ14011 172 aaKnown RBP12.14□□□□□ -0.47
TPM4-204ENST00000586499 FAM104AQ969W3 186 aa12.14□□□□□ -0.47
TPM4-204ENST00000586499 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
TPM4-204ENST00000586499 DPH3Q96FX2 82 aa12.14□□□□□ -0.47
TPM4-204ENST00000586499 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
TPM4-204ENST00000586499 TIMM21Q9BVV7 248 aa12.14□□□□□ -0.47
TPM4-204ENST00000586499 IGHV1-58A0A0C4DH39 117 aa12.13□□□□□ -0.47
TPM4-204ENST00000586499 C1orf196B1AJZ1 125 aa12.13□□□□□ -0.47
TPM4-204ENST00000586499 PRSS3P2Q8NHM4 247 aa12.13□□□□□ -0.47
TPM4-204ENST00000586499 HERC1Q15751 4861 aa12.13□□□□□ -0.47
TPM4-204ENST00000586499 TMEM218A2RU14 115 aa12.12□□□□□ -0.47
TPM4-204ENST00000586499 LOC389332A0A1B0GUA5 103 aa12.11□□□□□ -0.47
TPM4-204ENST00000586499 UQCC3Q6UW78 93 aa12.11□□□□□ -0.47
TPM4-204ENST00000586499 SPACA4Q8TDM5 124 aa12.11□□□□□ -0.47
TPM4-204ENST00000586499 A0A087WYN8 130 aa12.1□□□□□ -0.47
TPM4-204ENST00000586499 RPL37AP61513 92 aaKnown RBP12.1□□□□□ -0.47
TPM4-204ENST00000586499 DMBT1Q9UGM3 2413 aaPredicted RBP12.1□□□□□ -0.47
TPM4-204ENST00000586499 COX7A2LO14548 114 aa12.09□□□□□ -0.47
TPM4-204ENST00000586499 RAB5AP20339 215 aa12.09□□□□□ -0.47
TPM4-204ENST00000586499 C5orf38Q86SI9 138 aa12.09□□□□□ -0.47
TPM4-204ENST00000586499 IGKV2-24A0A0C4DH68 120 aa12.08□□□□□ -0.48
TPM4-204ENST00000586499 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
TPM4-204ENST00000586499 MALP21145 153 aa12.08□□□□□ -0.48
TPM4-204ENST00000586499 SPANXA1Q9NS26 97 aa12.08□□□□□ -0.48
TPM4-204ENST00000586499 PRSS47A8MTI9 375 aa12.07□□□□□ -0.48
TPM4-204ENST00000586499 MAP1LC3AQ9H492 121 aa12.07□□□□□ -0.48
TPM4-204ENST00000586499 IGLV4-69A0A075B6H9 119 aa12.06□□□□□ -0.48
TPM4-204ENST00000586499 MRPS36P82909 103 aaKnown RBP12.06□□□□□ -0.48
TPM4-204ENST00000586499 MAJINQ3KP22 176 aa12.06□□□□□ -0.48
TPM4-204ENST00000586499 COMMD7Q86VX2 200 aa12.06□□□□□ -0.48
TPM4-204ENST00000586499 CARD19Q96LW7 228 aa12.06□□□□□ -0.48
TPM4-204ENST00000586499 IMMP2LQ96T52 175 aa12.06□□□□□ -0.48
TPM4-204ENST00000586499 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
TPM4-204ENST00000586499 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
TPM4-204ENST00000586499 A0A096LNI7 61 aa12.05□□□□□ -0.48
TPM4-204ENST00000586499 HNRNPA3P51991 378 aaKnown RBP12.05□□□□□ -0.48
TPM4-204ENST00000586499 SYCNQ0VAF6 134 aa12.05□□□□□ -0.48
TPM4-204ENST00000586499 SEC11CQ9BY50 192 aa12.05□□□□□ -0.48
TPM4-204ENST00000586499 Q8N8P6 123 aa12.04□□□□□ -0.48
TPM4-204ENST00000586499 CTDSP1Q9GZU7 261 aa12.04□□□□□ -0.48
TPM4-204ENST00000586499 PLAC8Q9NZF1 115 aa12.04□□□□□ -0.48
TPM4-204ENST00000586499 IFITM10A6NMD0 228 aa12.03□□□□□ -0.48
TPM4-204ENST00000586499 J3QL48 77 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms