RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CAMPP49913 170 aa7.22□□□□□ -1.25
BRCA1-225ENST00000586385 C9orf116Q5BN46 136 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-225ENST00000586385 MRPL52Q86TS9 123 aaKnown RBP7.22□□□□□ -1.25
BRCA1-225ENST00000586385 KRTAP11-1Q8IUC1 163 aa7.22□□□□□ -1.25
BRCA1-225ENST00000586385 PRR26Q8N8Z3 221 aa7.22□□□□□ -1.25
BRCA1-225ENST00000586385 NUP35Q8NFH5 326 aa7.22□□□□□ -1.25
BRCA1-225ENST00000586385 TMEM242Q9NWH2 141 aa7.22□□□□□ -1.25
BRCA1-225ENST00000586385 PKIGQ9Y2B9 76 aa7.22□□□□□ -1.25
BRCA1-225ENST00000586385 LOC107984640A0A0U1RRK4 108 aa7.21□□□□□ -1.26
BRCA1-225ENST00000586385 ZNF561-AS1K7EIQ3 104 aa7.21□□□□□ -1.26
BRCA1-225ENST00000586385 PDE6DO43924 150 aa7.21□□□□□ -1.26
BRCA1-225ENST00000586385 PHF5AQ7RTV0 110 aaKnown RBP7.21□□□□□ -1.26
BRCA1-225ENST00000586385 OCC1Q8TAD7 63 aa7.21□□□□□ -1.26
BRCA1-225ENST00000586385 PMCHP20382 165 aa7.2□□□□□ -1.26
BRCA1-225ENST00000586385 POLR2KP53803 58 aaKnown RBP7.2□□□□□ -1.26
BRCA1-225ENST00000586385 EIF5AP63241 154 aaKnown RBP7.2□□□□□ -1.26
BRCA1-225ENST00000586385 TMEM101Q96IK0 257 aa7.2□□□□□ -1.26
BRCA1-225ENST00000586385 BTF3L4Q96K17 158 aa7.2□□□□□ -1.26
BRCA1-225ENST00000586385 BIN3Q9NQY0 253 aa7.2□□□□□ -1.26
BRCA1-225ENST00000586385 APOMO95445 188 aa7.19□□□□□ -1.26
BRCA1-225ENST00000586385 MT-ND6P03923 174 aa7.19□□□□□ -1.26
BRCA1-225ENST00000586385 SS18Q15532 418 aa7.19□□□□□ -1.26
BRCA1-225ENST00000586385 C1orf137Q5JT78 98 aa7.19□□□□□ -1.26
BRCA1-225ENST00000586385 TEX261Q6UWH6 196 aa7.19□□□□□ -1.26
BRCA1-225ENST00000586385 ZNF664Q8N3J9 261 aa7.19□□□□□ -1.26
BRCA1-225ENST00000586385 MUC2Q02817 5179 aa7.18□□□□□ -1.26
BRCA1-225ENST00000586385 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
BRCA1-225ENST00000586385 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
BRCA1-225ENST00000586385 MRAP2Q96G30 205 aa7.18□□□□□ -1.26
BRCA1-225ENST00000586385 OPRPNQ99935 248 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-225ENST00000586385 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
BRCA1-225ENST00000586385 IGLV7-43P04211 117 aa7.17□□□□□ -1.26
BRCA1-225ENST00000586385 RNASE13Q5GAN3 156 aaKnown RBP7.17□□□□□ -1.26
BRCA1-225ENST00000586385 EIF5AL1Q6IS14 154 aaKnown RBP7.17□□□□□ -1.26
BRCA1-225ENST00000586385 KRTAP7-1Q8IUC3 87 aa7.17□□□□□ -1.26
BRCA1-225ENST00000586385 ISOC2Q96AB3 205 aa7.17□□□□□ -1.26
BRCA1-225ENST00000586385 CAMK2N2Q96S95 79 aa7.17□□□□□ -1.26
BRCA1-225ENST00000586385 ST20Q9HBF5 79 aa7.17□□□□□ -1.26
BRCA1-225ENST00000586385 A0A1B0GVG6 124 aa7.16□□□□□ -1.26
BRCA1-225ENST00000586385 C7orf77A4D0Y5 90 aa7.16□□□□□ -1.26
BRCA1-225ENST00000586385 COX7A2LO14548 114 aa7.16□□□□□ -1.26
BRCA1-225ENST00000586385 RPL18AQ02543 176 aaKnown RBP7.16□□□□□ -1.26
BRCA1-225ENST00000586385 SMIM15Q7Z3B0 74 aa7.16□□□□□ -1.26
BRCA1-225ENST00000586385 C5orf38Q86SI9 138 aa7.16□□□□□ -1.26
BRCA1-225ENST00000586385 C2orf48Q96LS8 159 aa7.16□□□□□ -1.26
BRCA1-225ENST00000586385 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
BRCA1-225ENST00000586385 C1orf196B1AJZ1 125 aa7.15□□□□□ -1.26
BRCA1-225ENST00000586385 MALP21145 153 aa7.15□□□□□ -1.26
BRCA1-225ENST00000586385 FAM104AQ969W3 186 aa7.15□□□□□ -1.26
BRCA1-225ENST00000586385 UBE2D4Q9Y2X8 147 aa7.15□□□□□ -1.26
BRCA1-225ENST00000586385 TRAV13-1A0A0B4J241 112 aa7.14□□□□□ -1.27
BRCA1-225ENST00000586385 H0Y9J4 135 aa7.14□□□□□ -1.27
BRCA1-225ENST00000586385 TEX46H3BTG2 121 aa7.14□□□□□ -1.27
BRCA1-225ENST00000586385 GATCO43716 136 aaKnown RBP7.14□□□□□ -1.27
BRCA1-225ENST00000586385 RAB4AP20338 218 aa7.14□□□□□ -1.27
BRCA1-225ENST00000586385 Q6ZUT4 128 aa7.14□□□□□ -1.27
BRCA1-225ENST00000586385 FAM231DQ6ZW35 169 aa7.14□□□□□ -1.27
BRCA1-225ENST00000586385 DIRC1Q969H9 104 aa7.14□□□□□ -1.27
BRCA1-225ENST00000586385 CSDC2Q9Y534 153 aaKnown RBP7.14□□□□□ -1.27
BRCA1-225ENST00000586385 SMKR1H3BMG3 65 aa7.13□□□□□ -1.27
BRCA1-225ENST00000586385 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
BRCA1-225ENST00000586385 RNF151Q2KHN1 245 aa7.13□□□□□ -1.27
BRCA1-225ENST00000586385 C10orf25Q5T742 122 aa7.13□□□□□ -1.27
BRCA1-225ENST00000586385 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
BRCA1-225ENST00000586385 NRACQ8N912 160 aa7.13□□□□□ -1.27
BRCA1-225ENST00000586385 FAM210AQ96ND0 272 aa7.13□□□□□ -1.27
BRCA1-225ENST00000586385 TMEM191AQ9H0A3 160 aa7.13□□□□□ -1.27
BRCA1-225ENST00000586385 A8MWL6 223 aa7.12□□□□□ -1.27
BRCA1-225ENST00000586385 CT83Q5H943 113 aa7.12□□□□□ -1.27
BRCA1-225ENST00000586385 IGLV1-50A0A075B6I6 118 aa7.11□□□□□ -1.27
BRCA1-225ENST00000586385 A0A087WZ39 114 aa7.11□□□□□ -1.27
BRCA1-225ENST00000586385 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
BRCA1-225ENST00000586385 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
BRCA1-225ENST00000586385 HIGD1CA8MV81 97 aa7.1□□□□□ -1.27
BRCA1-225ENST00000586385 VCYO14598 125 aa7.1□□□□□ -1.27
BRCA1-225ENST00000586385 TAGLN2P37802 199 aaKnown RBP7.1□□□□□ -1.27
BRCA1-225ENST00000586385 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-225ENST00000586385 IGHV3OR16-9A0A0B4J2B5 98 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 TMEM250H0YL14 139 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
BRCA1-225ENST00000586385 PRR4Q16378 134 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 UNQ6190/PRO20217Q6UXQ8 127 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 FAM19A5Q7Z5A7 132 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-225ENST00000586385 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 OR10D4PQ8NGN7 298 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 TSKUQ8WUA8 353 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 TIMM21Q9BVV7 248 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 C6orf48Q9UBA6 75 aa7.09□□□□□ -1.27
BRCA1-225ENST00000586385 FCER1GP30273 86 aa7.08□□□□□ -1.28
BRCA1-225ENST00000586385 RPL39P62891 51 aaKnown RBP7.08□□□□□ -1.28
BRCA1-225ENST00000586385 ORAOV1Q8WV07 137 aa7.08□□□□□ -1.28
BRCA1-225ENST00000586385 RAB14P61106 215 aa7.07□□□□□ -1.28
BRCA1-225ENST00000586385 LINC01551Q86U37 167 aa7.07□□□□□ -1.28
BRCA1-225ENST00000586385 SMDT1Q9H4I9 107 aa7.07□□□□□ -1.28
BRCA1-225ENST00000586385 F8WDY8 70 aa7.06□□□□□ -1.28
BRCA1-225ENST00000586385 KIAA0087Q14695 138 aa7.06□□□□□ -1.28
BRCA1-225ENST00000586385 GAGE2EQ4V326 116 aa7.06□□□□□ -1.28
BRCA1-225ENST00000586385 BORCS7Q96B45 105 aa7.06□□□□□ -1.28
BRCA1-225ENST00000586385 IMMP2LQ96T52 175 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms