RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 MRPL52Q86TS9 123 aaKnown RBP11.47□□□□□ -0.57
SRSF1-209ENST00000585096 C15orf56Q8N910 161 aa11.47□□□□□ -0.57
SRSF1-209ENST00000585096 PPP1R2P9O14990 202 aa11.46□□□□□ -0.57
SRSF1-209ENST00000585096 CAMPP49913 170 aa11.46□□□□□ -0.57
SRSF1-209ENST00000585096 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
SRSF1-209ENST00000585096 FAM104BQ5XKR9 115 aa11.46□□□□□ -0.57
SRSF1-209ENST00000585096 NRACQ8N912 160 aa11.46□□□□□ -0.57
SRSF1-209ENST00000585096 DPH3Q96FX2 82 aa11.46□□□□□ -0.57
SRSF1-209ENST00000585096 KIR2DL4Q99706 377 aa11.46□□□□□ -0.57
SRSF1-209ENST00000585096 LINC00959A0A1B0GUT2 108 aa11.45□□□□□ -0.58
SRSF1-209ENST00000585096 LINC00862A6NCI5 91 aa11.45□□□□□ -0.58
SRSF1-209ENST00000585096 S100A8P05109 93 aa11.45□□□□□ -0.58
SRSF1-209ENST00000585096 XCL1P47992 114 aa11.45□□□□□ -0.58
SRSF1-209ENST00000585096 SMAGPQ0VAQ4 97 aa11.45□□□□□ -0.58
SRSF1-209ENST00000585096 FOXI1Q12951 378 aa11.45□□□□□ -0.58
SRSF1-209ENST00000585096 SS18Q15532 418 aa11.45□□□□□ -0.58
SRSF1-209ENST00000585096 CDC42SE2Q9NRR3 84 aa11.45□□□□□ -0.58
SRSF1-209ENST00000585096 PANO1I0J062 215 aa11.44□□□□□ -0.58
SRSF1-209ENST00000585096 KRTAP10-4P60372 401 aaPredicted RBP11.44□□□□□ -0.58
SRSF1-209ENST00000585096 RPL37AP61513 92 aaKnown RBP11.44□□□□□ -0.58
SRSF1-209ENST00000585096 MRPL51Q4U2R6 128 aaKnown RBP11.44□□□□□ -0.58
SRSF1-209ENST00000585096 HIGD2BQ4VC39 106 aa11.44□□□□□ -0.58
SRSF1-209ENST00000585096 ZNF664Q8N3J9 261 aa11.44□□□□□ -0.58
SRSF1-209ENST00000585096 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
SRSF1-209ENST00000585096 CCL25O15444 150 aa11.43□□□□□ -0.58
SRSF1-209ENST00000585096 CKS2P33552 79 aa11.43□□□□□ -0.58
SRSF1-209ENST00000585096 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
SRSF1-209ENST00000585096 C20orf78Q9BR46 151 aa11.43□□□□□ -0.58
SRSF1-209ENST00000585096 KRTAP29-1A8MX34 341 aaPredicted RBP11.42□□□□□ -0.58
SRSF1-209ENST00000585096 F8W036 122 aa11.42□□□□□ -0.58
SRSF1-209ENST00000585096 TRBV24-1A0A075B6N3 115 aa11.41□□□□□ -0.58
SRSF1-209ENST00000585096 HBBP68871 147 aa11.41□□□□□ -0.58
SRSF1-209ENST00000585096 TMEM18Q96B42 140 aa11.41□□□□□ -0.58
SRSF1-209ENST00000585096 CSDC2Q9Y534 153 aaKnown RBP11.41□□□□□ -0.58
SRSF1-209ENST00000585096 IGHV1-58A0A0C4DH39 117 aa11.4□□□□□ -0.58
SRSF1-209ENST00000585096 TCAPO15273 167 aa11.4□□□□□ -0.58
SRSF1-209ENST00000585096 RAB14P61106 215 aa11.4□□□□□ -0.58
SRSF1-209ENST00000585096 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
SRSF1-209ENST00000585096 CD164L2Q6UWJ8 174 aa11.4□□□□□ -0.58
SRSF1-209ENST00000585096 RPL32P62910 135 aaKnown RBP11.39□□□□□ -0.59
SRSF1-209ENST00000585096 COX6A2Q02221 97 aa11.39□□□□□ -0.59
SRSF1-209ENST00000585096 SPACA4Q8TDM5 124 aa11.39□□□□□ -0.59
SRSF1-209ENST00000585096 UBE2D4Q9Y2X8 147 aa11.39□□□□□ -0.59
SRSF1-209ENST00000585096 A0A087WYN8 130 aa11.38□□□□□ -0.59
SRSF1-209ENST00000585096 A0A1B0GXF2 115 aa11.38□□□□□ -0.59
SRSF1-209ENST00000585096 C1orf196B1AJZ1 125 aa11.38□□□□□ -0.59
SRSF1-209ENST00000585096 TNFRSF6BO95407 300 aa11.38□□□□□ -0.59
SRSF1-209ENST00000585096 CHTF8P0CG12 524 aa11.38□□□□□ -0.59
SRSF1-209ENST00000585096 D6R8Y8 96 aa11.37□□□□□ -0.59
SRSF1-209ENST00000585096 PPBPP02775 128 aa11.37□□□□□ -0.59
SRSF1-209ENST00000585096 TIMM21Q9BVV7 248 aa11.37□□□□□ -0.59
SRSF1-209ENST00000585096 PKIGQ9Y2B9 76 aa11.37□□□□□ -0.59
SRSF1-209ENST00000585096 ZNF561-AS1K7EIQ3 104 aa11.36□□□□□ -0.59
SRSF1-209ENST00000585096 ATP5L2Q7Z4Y8 100 aa11.36□□□□□ -0.59
SRSF1-209ENST00000585096 PHOX2AO14813 284 aa11.35□□□□□ -0.59
SRSF1-209ENST00000585096 OXTP01178 125 aa11.35□□□□□ -0.59
SRSF1-209ENST00000585096 MALP21145 153 aa11.35□□□□□ -0.59
SRSF1-209ENST00000585096 PNRC1Q12796 327 aaPredicted RBP11.35□□□□□ -0.59
SRSF1-209ENST00000585096 PRSS3P2Q8NHM4 247 aa11.35□□□□□ -0.59
SRSF1-209ENST00000585096 SMIM2Q9BVW6 85 aa11.35□□□□□ -0.59
SRSF1-209ENST00000585096 PLAC8Q9NZF1 115 aa11.35□□□□□ -0.59
SRSF1-209ENST00000585096 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
SRSF1-209ENST00000585096 COX7A2LO14548 114 aa11.34□□□□□ -0.59
SRSF1-209ENST00000585096 MAJINQ3KP22 176 aa11.34□□□□□ -0.59
SRSF1-209ENST00000585096 IGKV2-24A0A0C4DH68 120 aa11.33□□□□□ -0.6
SRSF1-209ENST00000585096 NPYP01303 97 aa11.33□□□□□ -0.6
SRSF1-209ENST00000585096 MT-ND4LP03901 98 aa11.33□□□□□ -0.6
SRSF1-209ENST00000585096 RNASE13Q5GAN3 156 aaKnown RBP11.33□□□□□ -0.6
SRSF1-209ENST00000585096 Q6ZUT4 128 aa11.33□□□□□ -0.6
SRSF1-209ENST00000585096 ORMDL3Q8N138 153 aa11.33□□□□□ -0.6
SRSF1-209ENST00000585096 CARD19Q96LW7 228 aa11.33□□□□□ -0.6
SRSF1-209ENST00000585096 LINC00474Q9P2X8 69 aa11.33□□□□□ -0.6
SRSF1-209ENST00000585096 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
SRSF1-209ENST00000585096 TMEM136Q6ZRR5 245 aa11.32□□□□□ -0.6
SRSF1-209ENST00000585096 C7orf33Q8WU49 177 aa11.32□□□□□ -0.6
SRSF1-209ENST00000585096 ANAPC16Q96DE5 110 aa11.32□□□□□ -0.6
SRSF1-209ENST00000585096 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
SRSF1-209ENST00000585096 SPANXA1Q9NS26 97 aa11.31□□□□□ -0.6
SRSF1-209ENST00000585096 RAB5AP20339 215 aa11.3□□□□□ -0.6
SRSF1-209ENST00000585096 HNRNPA3P51991 378 aaKnown RBP11.3□□□□□ -0.6
SRSF1-209ENST00000585096 RPL39P62891 51 aaKnown RBP11.3□□□□□ -0.6
SRSF1-209ENST00000585096 STPG4Q8N801 248 aa11.3□□□□□ -0.6
SRSF1-209ENST00000585096 PRELID3AQ96N28 172 aa11.3□□□□□ -0.6
SRSF1-209ENST00000585096 A0A096LNI7 61 aa11.29□□□□□ -0.6
SRSF1-209ENST00000585096 APOMO95445 188 aa11.29□□□□□ -0.6
SRSF1-209ENST00000585096 IGLV4-69A0A075B6H9 119 aa11.28□□□□□ -0.6
SRSF1-209ENST00000585096 MRPS36P82909 103 aaKnown RBP11.28□□□□□ -0.6
SRSF1-209ENST00000585096 C5orf38Q86SI9 138 aa11.28□□□□□ -0.6
SRSF1-209ENST00000585096 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
SRSF1-209ENST00000585096 CLLU1Q5K131 121 aa11.27□□□□□ -0.61
SRSF1-209ENST00000585096 LRP1Q07954 4544 aaKnown RBP11.27□□□□□ -0.61
SRSF1-209ENST00000585096 C2orf48Q96LS8 159 aa11.26□□□□□ -0.61
SRSF1-209ENST00000585096 CAMK2N2Q96S95 79 aa11.26□□□□□ -0.61
SRSF1-209ENST00000585096 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
SRSF1-209ENST00000585096 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
SRSF1-209ENST00000585096 Q6ZRU5 148 aa11.25□□□□□ -0.61
SRSF1-209ENST00000585096 OPRPNQ99935 248 aaPredicted RBP11.25□□□□□ -0.61
SRSF1-209ENST00000585096 MAP1LC3AQ9H492 121 aa11.25□□□□□ -0.61
SRSF1-209ENST00000585096 LOC107984640A0A0U1RRK4 108 aa11.24□□□□□ -0.61
SRSF1-209ENST00000585096 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms