RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	CSDC2	Q9Y534	153 aa	Known RBP	10.62	□□□□□ -0.71
ERBB2-222	ENST00000584908	PRSS47	A8MTI9	375 aa		10.61	□□□□□ -0.71
ERBB2-222	ENST00000584908	OR5A1	Q8NGJ0	315 aa		10.61	□□□□□ -0.71
ERBB2-222	ENST00000584908	TMEM101	Q96IK0	257 aa		10.61	□□□□□ -0.71
ERBB2-222	ENST00000584908	CDC42SE2	Q9NRR3	84 aa		10.61	□□□□□ -0.71
ERBB2-222	ENST00000584908	LAMTOR2	Q9Y2Q5	125 aa		10.61	□□□□□ -0.71
ERBB2-222	ENST00000584908	DNAH8	Q96JB1	4490 aa		10.61	□□□□□ -0.71
ERBB2-222	ENST00000584908	PRELID3A	Q96N28	172 aa		10.6	□□□□□ -0.71
ERBB2-222	ENST00000584908	PRSS1	P07477	247 aa		10.59	□□□□□ -0.71
ERBB2-222	ENST00000584908	SMAGP	Q0VAQ4	97 aa		10.59	□□□□□ -0.71
ERBB2-222	ENST00000584908		Q6ZSA8	131 aa		10.59	□□□□□ -0.71
ERBB2-222	ENST00000584908	CLRN3	Q8NCR9	226 aa		10.59	□□□□□ -0.71
ERBB2-222	ENST00000584908	TIMM21	Q9BVV7	248 aa		10.59	□□□□□ -0.71
ERBB2-222	ENST00000584908	UBE2D4	Q9Y2X8	147 aa		10.59	□□□□□ -0.71
ERBB2-222	ENST00000584908		Q8N1X5	172 aa		10.58	□□□□□ -0.71
ERBB2-222	ENST00000584908	ZNF664	Q8N3J9	261 aa		10.58	□□□□□ -0.71
ERBB2-222	ENST00000584908	TMEM18	Q96B42	140 aa		10.58	□□□□□ -0.71
ERBB2-222	ENST00000584908	RHEB	Q15382	184 aa		10.58	□□□□□ -0.72
ERBB2-222	ENST00000584908	DGAT2L7P	Q6IED9	249 aa		10.58	□□□□□ -0.72
ERBB2-222	ENST00000584908	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.58	□□□□□ -0.72
ERBB2-222	ENST00000584908	PCLO	Q9Y6V0	5065 aa		10.57	□□□□□ -0.72
ERBB2-222	ENST00000584908	IGKV3OR2-268	A0A0C4DH90	116 aa		10.57	□□□□□ -0.72
ERBB2-222	ENST00000584908	LINC00959	A0A1B0GUT2	108 aa		10.57	□□□□□ -0.72
ERBB2-222	ENST00000584908	GAGE12H	A6NDE8	117 aa		10.57	□□□□□ -0.72
ERBB2-222	ENST00000584908	FAM30A	Q9NZY2	134 aa		10.57	□□□□□ -0.72
ERBB2-222	ENST00000584908	CCL25	O15444	150 aa		10.55	□□□□□ -0.72
ERBB2-222	ENST00000584908	S100P	P25815	95 aa		10.55	□□□□□ -0.72
ERBB2-222	ENST00000584908	CNBP	P62633	177 aa	Known RBP	10.55	□□□□□ -0.72
ERBB2-222	ENST00000584908	FOXI1	Q12951	378 aa		10.55	□□□□□ -0.72
ERBB2-222	ENST00000584908	KRTAP4-5	Q9BYR2	181 aa		10.55	□□□□□ -0.72
ERBB2-222	ENST00000584908	RPL39	P62891	51 aa	Known RBP	10.54	□□□□□ -0.72
ERBB2-222	ENST00000584908	LINC01620	Q4KN68	170 aa		10.54	□□□□□ -0.72
ERBB2-222	ENST00000584908	C15orf56	Q8N910	161 aa		10.54	□□□□□ -0.72
ERBB2-222	ENST00000584908	C9orf163	Q8N9P6	203 aa		10.54	□□□□□ -0.72
ERBB2-222	ENST00000584908	FAM104A	Q969W3	186 aa		10.54	□□□□□ -0.72
ERBB2-222	ENST00000584908	MAP1LC3A	Q9H492	121 aa		10.54	□□□□□ -0.72
ERBB2-222	ENST00000584908	SPANXA1	Q9NS26	97 aa		10.54	□□□□□ -0.72
ERBB2-222	ENST00000584908	ABCA13	Q86UQ4	5058 aa		10.54	□□□□□ -0.72
ERBB2-222	ENST00000584908	RAB5A	P20339	215 aa		10.53	□□□□□ -0.72
ERBB2-222	ENST00000584908	SS18	Q15532	418 aa		10.53	□□□□□ -0.72
ERBB2-222	ENST00000584908	COX19	Q49B96	90 aa		10.53	□□□□□ -0.72
ERBB2-222	ENST00000584908	CFAP161	Q6P656	301 aa		10.53	□□□□□ -0.72
ERBB2-222	ENST00000584908		Q8N8P6	123 aa		10.53	□□□□□ -0.72
ERBB2-222	ENST00000584908	GNB1L	Q9BYB4	327 aa		10.53	□□□□□ -0.72
ERBB2-222	ENST00000584908	RPS10P5	Q9NQ39	176 aa		10.53	□□□□□ -0.72
ERBB2-222	ENST00000584908	hDV102S1	A0JD36	115 aa		10.52	□□□□□ -0.73
ERBB2-222	ENST00000584908	C1orf196	B1AJZ1	125 aa		10.52	□□□□□ -0.73
ERBB2-222	ENST00000584908		K7EMI3	77 aa		10.52	□□□□□ -0.73
ERBB2-222	ENST00000584908	MRPS36	P82909	103 aa	Known RBP	10.52	□□□□□ -0.73
ERBB2-222	ENST00000584908	CD164L2	Q6UWJ8	174 aa		10.52	□□□□□ -0.73
ERBB2-222	ENST00000584908		Q6ZUT4	128 aa		10.52	□□□□□ -0.73
ERBB2-222	ENST00000584908	FAT1	Q14517	4588 aa		10.51	□□□□□ -0.73
ERBB2-222	ENST00000584908	XCL1	P47992	114 aa		10.51	□□□□□ -0.73
ERBB2-222	ENST00000584908	PYGO1	Q9Y3Y4	419 aa		10.51	□□□□□ -0.73
ERBB2-222	ENST00000584908	SRRM2	Q9UQ35	2752 aa	Known RBP	10.5	□□□□□ -0.73
ERBB2-222	ENST00000584908	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.5	□□□□□ -0.73
ERBB2-222	ENST00000584908	LOC389332	A0A1B0GUA5	103 aa		10.5	□□□□□ -0.73
ERBB2-222	ENST00000584908	APOC3	P02656	99 aa		10.5	□□□□□ -0.73
ERBB2-222	ENST00000584908	SLPI	P03973	132 aa		10.5	□□□□□ -0.73
ERBB2-222	ENST00000584908	NXT2	Q9NPJ8	142 aa	Known RBP	10.5	□□□□□ -0.73
ERBB2-222	ENST00000584908	SNAPIN	O95295	136 aa		10.49	□□□□□ -0.73
ERBB2-222	ENST00000584908	MT-ND6	P03923	174 aa		10.49	□□□□□ -0.73
ERBB2-222	ENST00000584908	NDUFA5	Q16718	116 aa		10.49	□□□□□ -0.73
ERBB2-222	ENST00000584908	RNASE13	Q5GAN3	156 aa	Known RBP	10.49	□□□□□ -0.73
ERBB2-222	ENST00000584908	SVBP	Q8N300	66 aa		10.49	□□□□□ -0.73
ERBB2-222	ENST00000584908	AP5S1	Q9NUS5	200 aa		10.49	□□□□□ -0.73
ERBB2-222	ENST00000584908	KIAA1644	Q3SXP7	199 aa		10.48	□□□□□ -0.73
ERBB2-222	ENST00000584908	ORMDL2	Q53FV1	153 aa		10.48	□□□□□ -0.73
ERBB2-222	ENST00000584908	VPS13B	Q7Z7G8	4022 aa		10.47	□□□□□ -0.73
ERBB2-222	ENST00000584908	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.47	□□□□□ -0.73
ERBB2-222	ENST00000584908	IFI27	P40305	119 aa	Predicted RBP	10.47	□□□□□ -0.73
ERBB2-222	ENST00000584908	HAMP	P81172	84 aa		10.47	□□□□□ -0.73
ERBB2-222	ENST00000584908	SDIM1	Q6ZPB5	146 aa		10.47	□□□□□ -0.73
ERBB2-222	ENST00000584908	CHAC1	Q9BUX1	264 aa		10.47	□□□□□ -0.73
ERBB2-222	ENST00000584908	TRAV13-1	A0A0B4J241	112 aa		10.46	□□□□□ -0.73
ERBB2-222	ENST00000584908	IGHV1-58	A0A0C4DH39	117 aa		10.46	□□□□□ -0.73
ERBB2-222	ENST00000584908	EPM2A	B3EWF7	344 aa		10.46	□□□□□ -0.73
ERBB2-222	ENST00000584908	OPRPN	Q99935	248 aa	Predicted RBP	10.46	□□□□□ -0.73
ERBB2-222	ENST00000584908	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.46	□□□□□ -0.73
ERBB2-222	ENST00000584908	NPS	P0C0P6	89 aa		10.45	□□□□□ -0.74
ERBB2-222	ENST00000584908	HIGD2B	Q4VC39	106 aa		10.45	□□□□□ -0.74
ERBB2-222	ENST00000584908	C2orf66	Q6UXQ4	117 aa		10.45	□□□□□ -0.74
ERBB2-222	ENST00000584908	SCX	Q7RTU7	201 aa		10.45	□□□□□ -0.74
ERBB2-222	ENST00000584908	CYSLTR1	Q9Y271	337 aa		10.45	□□□□□ -0.74
ERBB2-222	ENST00000584908	IGLV4-3	A0A075B6K6	122 aa		10.44	□□□□□ -0.74
ERBB2-222	ENST00000584908	LINC01546	A6NGU7	62 aa		10.44	□□□□□ -0.74
ERBB2-222	ENST00000584908	SMR3B	P02814	79 aa	Predicted RBP	10.44	□□□□□ -0.74
ERBB2-222	ENST00000584908		Q5VSD8	79 aa		10.44	□□□□□ -0.74
ERBB2-222	ENST00000584908	MRPL18	Q9H0U6	180 aa	Known RBP	10.44	□□□□□ -0.74
ERBB2-222	ENST00000584908	IGHV3-64	A0A075B6Q5	118 aa		10.43	□□□□□ -0.74
ERBB2-222	ENST00000584908	COX7A2L	O14548	114 aa		10.43	□□□□□ -0.74
ERBB2-222	ENST00000584908	G0S2	P27469	103 aa		10.43	□□□□□ -0.74
ERBB2-222	ENST00000584908	CIRBP	Q14011	172 aa	Known RBP	10.43	□□□□□ -0.74
ERBB2-222	ENST00000584908	CIRBP-AS1	Q8TBR5	109 aa		10.43	□□□□□ -0.74
ERBB2-222	ENST00000584908	TMEM141	Q96I45	108 aa		10.43	□□□□□ -0.74
ERBB2-222	ENST00000584908	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.42	□□□□□ -0.74
ERBB2-222	ENST00000584908	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.42	□□□□□ -0.74
ERBB2-222	ENST00000584908	IGIP	A6NJ69	53 aa		10.42	□□□□□ -0.74
ERBB2-222	ENST00000584908	IFITM10	A6NMD0	228 aa		10.42	□□□□□ -0.74
ERBB2-222	ENST00000584908	FAM229A	H3BQW9	127 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms