RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
SKA2-208ENST00000583927 S100PP25815 95 aa6.42□□□□□ -1.38
SKA2-208ENST00000583927 CNBPP62633 177 aaKnown RBP6.42□□□□□ -1.38
SKA2-208ENST00000583927 FAM104BQ5XKR9 115 aa6.42□□□□□ -1.38
SKA2-208ENST00000583927 MRPL52Q86TS9 123 aaKnown RBP6.42□□□□□ -1.38
SKA2-208ENST00000583927 CHAC1Q9BUX1 264 aa6.42□□□□□ -1.38
SKA2-208ENST00000583927 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
SKA2-208ENST00000583927 IGLV10-54A0A075B6I4 117 aa6.41□□□□□ -1.38
SKA2-208ENST00000583927 TRBV24-1A0A075B6N3 115 aa6.41□□□□□ -1.38
SKA2-208ENST00000583927 TMEM218A2RU14 115 aa6.41□□□□□ -1.38
SKA2-208ENST00000583927 VCYO14598 125 aa6.41□□□□□ -1.38
SKA2-208ENST00000583927 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
SKA2-208ENST00000583927 AKR1D1P51857 326 aa6.41□□□□□ -1.38
SKA2-208ENST00000583927 RPL32P62910 135 aaKnown RBP6.41□□□□□ -1.38
SKA2-208ENST00000583927 AMMECR1LQ6DCA0 310 aa6.41□□□□□ -1.38
SKA2-208ENST00000583927 NRACQ8N912 160 aa6.41□□□□□ -1.38
SKA2-208ENST00000583927 CSDC2Q9Y534 153 aaKnown RBP6.41□□□□□ -1.38
SKA2-208ENST00000583927 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.38
SKA2-208ENST00000583927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.4□□□□□ -1.38
SKA2-208ENST00000583927 IGKV2-29A2NJV5 120 aaPredicted RBP6.4□□□□□ -1.38
SKA2-208ENST00000583927 C5orf52A6NGY3 159 aa6.4□□□□□ -1.38
SKA2-208ENST00000583927 TCAPO15273 167 aa6.4□□□□□ -1.38
SKA2-208ENST00000583927 SUMO2P61956 95 aaKnown RBP6.4□□□□□ -1.38
SKA2-208ENST00000583927 PNRC1Q12796 327 aaPredicted RBP6.4□□□□□ -1.38
SKA2-208ENST00000583927 MRPL51Q4U2R6 128 aaKnown RBP6.4□□□□□ -1.38
SKA2-208ENST00000583927 SCXQ7RTU7 201 aa6.4□□□□□ -1.38
SKA2-208ENST00000583927 ATP5L2Q7Z4Y8 100 aa6.4□□□□□ -1.38
SKA2-208ENST00000583927 OR5A1Q8NGJ0 315 aa6.4□□□□□ -1.38
SKA2-208ENST00000583927 DEFB104AQ8WTQ1 72 aa6.4□□□□□ -1.38
SKA2-208ENST00000583927 C20orf78Q9BR46 151 aa6.4□□□□□ -1.38
SKA2-208ENST00000583927 PKHD1L1Q86WI1 4243 aa6.4□□□□□ -1.39
SKA2-208ENST00000583927 A0A1B0GXF2 115 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 C7orf77A4D0Y5 90 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 INAFM2P0DMQ5 153 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 HBBP68871 147 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 HAMPP81172 84 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 SMAGPQ0VAQ4 97 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 LINC01620Q4KN68 170 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 RNASEKQ6P5S7 137 aaKnown RBP6.39□□□□□ -1.39
SKA2-208ENST00000583927 CFAP161Q6P656 301 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 TMEM101Q96IK0 257 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 BTF3L4Q96K17 158 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 KIR2DL4Q99706 377 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 SEC11CQ9BY50 192 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 TMEM242Q9NWH2 141 aa6.39□□□□□ -1.39
SKA2-208ENST00000583927 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.38□□□□□ -1.39
SKA2-208ENST00000583927 PHOX2AO14813 284 aa6.38□□□□□ -1.39
SKA2-208ENST00000583927 CCL25O15444 150 aa6.38□□□□□ -1.39
SKA2-208ENST00000583927 PPBPP02775 128 aa6.38□□□□□ -1.39
SKA2-208ENST00000583927 PLA2G1BP04054 148 aaKnown RBP6.38□□□□□ -1.39
SKA2-208ENST00000583927 ADCYAP1P18509 176 aa6.38□□□□□ -1.39
SKA2-208ENST00000583927 CIRBPQ14011 172 aaKnown RBP6.38□□□□□ -1.39
SKA2-208ENST00000583927 SDIM1Q6ZPB5 146 aa6.38□□□□□ -1.39
SKA2-208ENST00000583927 C15orf56Q8N910 161 aa6.38□□□□□ -1.39
SKA2-208ENST00000583927 CIRBP-AS1Q8TBR5 109 aa6.38□□□□□ -1.39
SKA2-208ENST00000583927 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
SKA2-208ENST00000583927 LINC00959A0A1B0GUT2 108 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 hDV102S1A0JD36 115 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 SMKR1H3BMG3 65 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 CAMPP49913 170 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 RAB5BP61020 215 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 LINC00528Q8N1L1 170 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 ZNF664Q8N3J9 261 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 TIMM21Q9BVV7 248 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 AP5S1Q9NUS5 200 aa6.37□□□□□ -1.39
SKA2-208ENST00000583927 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
SKA2-208ENST00000583927 COLCA2A8K830 154 aa6.36□□□□□ -1.39
SKA2-208ENST00000583927 SLPIP03973 132 aa6.36□□□□□ -1.39
SKA2-208ENST00000583927 FCER1GP30273 86 aa6.36□□□□□ -1.39
SKA2-208ENST00000583927 CKS2P33552 79 aa6.36□□□□□ -1.39
SKA2-208ENST00000583927 FOXI1Q12951 378 aa6.36□□□□□ -1.39
SKA2-208ENST00000583927 TMEM18Q96B42 140 aa6.36□□□□□ -1.39
SKA2-208ENST00000583927 HERC1Q15751 4861 aa6.36□□□□□ -1.39
SKA2-208ENST00000583927 IGHV3-64A0A075B6Q5 118 aa6.35□□□□□ -1.39
SKA2-208ENST00000583927 TNFRSF6BO95407 300 aa6.35□□□□□ -1.39
SKA2-208ENST00000583927 MT-ND4LP03901 98 aa6.35□□□□□ -1.39
SKA2-208ENST00000583927 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
SKA2-208ENST00000583927 SS18Q15532 418 aa6.35□□□□□ -1.39
SKA2-208ENST00000583927 MRPL54Q6P161 138 aaKnown RBP6.35□□□□□ -1.39
SKA2-208ENST00000583927 CD164L2Q6UWJ8 174 aa6.35□□□□□ -1.39
SKA2-208ENST00000583927 SMIM2Q9BVW6 85 aa6.35□□□□□ -1.39
SKA2-208ENST00000583927 UBE2D4Q9Y2X8 147 aa6.35□□□□□ -1.39
SKA2-208ENST00000583927 IGKV3OR2-268A0A0C4DH90 116 aa6.34□□□□□ -1.39
SKA2-208ENST00000583927 PRSS47A8MTI9 375 aa6.34□□□□□ -1.39
SKA2-208ENST00000583927 C1orf196B1AJZ1 125 aa6.34□□□□□ -1.39
SKA2-208ENST00000583927 D6R8Y8 96 aa6.34□□□□□ -1.39
SKA2-208ENST00000583927 CBLN2Q8IUK8 224 aa6.34□□□□□ -1.39
SKA2-208ENST00000583927 ORMDL3Q8N138 153 aa6.34□□□□□ -1.39
SKA2-208ENST00000583927 LAMTOR2Q9Y2Q5 125 aa6.34□□□□□ -1.39
SKA2-208ENST00000583927 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
SKA2-208ENST00000583927 IGHV1-58A0A0C4DH39 117 aa6.33□□□□□ -1.4
SKA2-208ENST00000583927 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
SKA2-208ENST00000583927 LBHQ53QV2 105 aaPredicted RBP6.33□□□□□ -1.4
SKA2-208ENST00000583927 IMMP2LQ96T52 175 aa6.33□□□□□ -1.4
SKA2-208ENST00000583927 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
SKA2-208ENST00000583927 SMCO4Q9NRQ5 59 aa6.33□□□□□ -1.4
SKA2-208ENST00000583927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms