RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 KRTAP19-7Q3SYF9 63 aa-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 CCDC58Q4VC31 144 aa-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 MEIG1Q5JSS6 88 aa-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 TMEM170BQ5T4T1 132 aa-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 SNRNP25Q9BV90 132 aaKnown RBP-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 TP53AIP1Q9HCN2 124 aa-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 DCHS2Q6V1P9 2916 aa-0.59□□□□□ -2.5
SMARCE1-219ENST00000583294 GVINP1Q7Z2Y8 2422 aa-0.59□□□□□ -2.5
SMARCE1-219ENST00000583294 FXYD6-FXYD2A0A087WZ82 144 aa-0.59□□□□□ -2.5
SMARCE1-219ENST00000583294 SELENOWP63302 87 aa-0.59□□□□□ -2.5
SMARCE1-219ENST00000583294 TNXBP22105 4242 aa-0.6□□□□□ -2.51
SMARCE1-219ENST00000583294 C10orf71Q711Q0 1435 aa-0.61□□□□□ -2.51
SMARCE1-219ENST00000583294 AMELXQ99217 191 aa-0.61□□□□□ -2.51
SMARCE1-219ENST00000583294 NAA60Q9H7X0 242 aa-0.61□□□□□ -2.51
SMARCE1-219ENST00000583294 MAP1BP46821 2468 aaKnown RBP-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 CSPG4Q6UVK1 2322 aa-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 NDUFA2O43678 99 aa-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 DCDP81605 110 aaKnown RBP-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 COX17Q14061 63 aa-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 Q6JHZ5 121 aa-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 NDUFA4L2Q9NRX3 87 aa-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 FOCADQ5VW36 1801 aa-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 FAT2Q9NYQ8 4349 aa-0.62□□□□□ -2.51
SMARCE1-219ENST00000583294 BSNQ9UPA5 3926 aa-0.63□□□□□ -2.51
SMARCE1-219ENST00000583294 MIF4GDA9UHW6 222 aaKnown RBP-0.63□□□□□ -2.51
SMARCE1-219ENST00000583294 BAGE2Q86Y30 109 aa-0.63□□□□□ -2.51
SMARCE1-219ENST00000583294 TSLPQ969D9 159 aa-0.63□□□□□ -2.51
SMARCE1-219ENST00000583294 FAM107BQ9H098 131 aa-0.63□□□□□ -2.51
SMARCE1-219ENST00000583294 BCL9LQ86UU0 1499 aa-0.63□□□□□ -2.51
SMARCE1-219ENST00000583294 TENM2Q9NT68 2774 aa-0.63□□□□□ -2.51
SMARCE1-219ENST00000583294 SBF2Q86WG5 1849 aa-0.64□□□□□ -2.51
SMARCE1-219ENST00000583294 KIF21AQ7Z4S6 1674 aa-0.64□□□□□ -2.51
SMARCE1-219ENST00000583294 I3L2K1 104 aa-0.64□□□□□ -2.51
SMARCE1-219ENST00000583294 HECTD4Q9Y4D8 3996 aa-0.65□□□□□ -2.51
SMARCE1-219ENST00000583294 F8VRH5 84 aa-0.65□□□□□ -2.51
SMARCE1-219ENST00000583294 SPRR2BP35325 72 aa-0.65□□□□□ -2.51
SMARCE1-219ENST00000583294 LINC00472Q9H8W2 130 aa-0.65□□□□□ -2.51
SMARCE1-219ENST00000583294 LRP1BQ9NZR2 4599 aa-0.66□□□□□ -2.51
SMARCE1-219ENST00000583294 K7EQZ3 153 aa-0.66□□□□□ -2.52
SMARCE1-219ENST00000583294 UQCR11O14957 56 aa-0.66□□□□□ -2.52
SMARCE1-219ENST00000583294 PIGYQ3MUY2 71 aa-0.66□□□□□ -2.52
SMARCE1-219ENST00000583294 MGST2Q99735 147 aa-0.66□□□□□ -2.52
SMARCE1-219ENST00000583294 DYNLRB1Q9NP97 96 aa-0.66□□□□□ -2.52
SMARCE1-219ENST00000583294 PDZD2O15018 2839 aa-0.66□□□□□ -2.52
SMARCE1-219ENST00000583294 TRBV7-3A0A075B6L6 115 aa-0.67□□□□□ -2.52
SMARCE1-219ENST00000583294 TRBV6-1A0A0K0K1D8 114 aa-0.67□□□□□ -2.52
SMARCE1-219ENST00000583294 Q56UQ5 140 aa-0.67□□□□□ -2.52
SMARCE1-219ENST00000583294 PPP3R2Q96LZ3 170 aa-0.67□□□□□ -2.52
SMARCE1-219ENST00000583294 TSC22D3Q99576 134 aa-0.67□□□□□ -2.52
SMARCE1-219ENST00000583294 GOLGA4Q13439 2230 aaKnown RBP-0.67□□□□□ -2.52
SMARCE1-219ENST00000583294 COL6A3P12111 3177 aa-0.67□□□□□ -2.52
SMARCE1-219ENST00000583294 PIEZO2Q9H5I5 2752 aa-0.68□□□□□ -2.52
SMARCE1-219ENST00000583294 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.68□□□□□ -2.52
SMARCE1-219ENST00000583294 PSME4Q14997 1843 aa-0.68□□□□□ -2.52
SMARCE1-219ENST00000583294 CPSF1Q10570 1443 aaKnown RBP-0.69□□□□□ -2.52
SMARCE1-219ENST00000583294 IGLC7A0M8Q6 106 aa-0.69□□□□□ -2.52
SMARCE1-219ENST00000583294 APOC3P02656 99 aa-0.69□□□□□ -2.52
SMARCE1-219ENST00000583294 CATR1Q13166 79 aa-0.69□□□□□ -2.52
SMARCE1-219ENST00000583294 APC2O95996 2303 aa-0.69□□□□□ -2.52
SMARCE1-219ENST00000583294 MBD5Q9P267 1494 aa-0.69□□□□□ -2.52
SMARCE1-219ENST00000583294 SPTA1P02549 2419 aa-0.69□□□□□ -2.52
SMARCE1-219ENST00000583294 S100A12P80511 92 aa-0.7□□□□□ -2.52
SMARCE1-219ENST00000583294 PAPPAQ13219 1627 aa-0.71□□□□□ -2.52
SMARCE1-219ENST00000583294 RIMS1Q86UR5 1692 aaKnown RBP-0.71□□□□□ -2.52
SMARCE1-219ENST00000583294 WNK1Q9H4A3 2382 aa-0.71□□□□□ -2.52
SMARCE1-219ENST00000583294 LOC100130705A0A1B0GUX0 176 aa-0.71□□□□□ -2.52
SMARCE1-219ENST00000583294 COX6B1P14854 86 aa-0.71□□□□□ -2.52
SMARCE1-219ENST00000583294 TPPP2P59282 170 aa-0.71□□□□□ -2.52
SMARCE1-219ENST00000583294 SPANXDQ9BXN6 97 aa-0.71□□□□□ -2.52
SMARCE1-219ENST00000583294 NEBP20929 6669 aa-0.71□□□□□ -2.52
SMARCE1-219ENST00000583294 LOC730098B7Z3J9 87 aa-0.72□□□□□ -2.52
SMARCE1-219ENST00000583294 HMGN4O00479 90 aa-0.72□□□□□ -2.52
SMARCE1-219ENST00000583294 SPRR1BP22528 89 aa-0.72□□□□□ -2.52
SMARCE1-219ENST00000583294 BTG2P78543 158 aa-0.72□□□□□ -2.52
SMARCE1-219ENST00000583294 KRTAP19-8Q3LI54 63 aa-0.72□□□□□ -2.52
SMARCE1-219ENST00000583294 NAIPQ13075 1403 aa-0.72□□□□□ -2.53
SMARCE1-219ENST00000583294 MAP1AP78559 2803 aaPredicted RBP-0.73□□□□□ -2.53
SMARCE1-219ENST00000583294 TNFP01375 233 aa-0.73□□□□□ -2.53
SMARCE1-219ENST00000583294 APOC2P02655 101 aa-0.73□□□□□ -2.53
SMARCE1-219ENST00000583294 LINC01558Q9Y6Z2 57 aa-0.73□□□□□ -2.53
SMARCE1-219ENST00000583294 WDR7Q9Y4E6 1490 aa-0.73□□□□□ -2.53
SMARCE1-219ENST00000583294 KMT2CQ8NEZ4 4911 aaKnown RBP-0.74□□□□□ -2.53
SMARCE1-219ENST00000583294 ATRQ13535 2644 aa-0.74□□□□□ -2.53
SMARCE1-219ENST00000583294 ACANP16112 2415 aa-0.75□□□□□ -2.53
SMARCE1-219ENST00000583294 C8orf59Q8N0T1 100 aaPredicted RBP-0.75□□□□□ -2.53
SMARCE1-219ENST00000583294 TSC2P49815 1807 aa-0.75□□□□□ -2.53
SMARCE1-219ENST00000583294 K7EP13 123 aa-0.76□□□□□ -2.53
SMARCE1-219ENST00000583294 SPINK4O60575 86 aa-0.76□□□□□ -2.53
SMARCE1-219ENST00000583294 IFNGP01579 166 aa-0.76□□□□□ -2.53
SMARCE1-219ENST00000583294 FGF7P21781 194 aa-0.76□□□□□ -2.53
SMARCE1-219ENST00000583294 C5orf38Q86SI9 138 aa-0.76□□□□□ -2.53
SMARCE1-219ENST00000583294 DEFB123Q8N688 67 aa-0.76□□□□□ -2.53
SMARCE1-219ENST00000583294 HERC1Q15751 4861 aa-0.76□□□□□ -2.53
SMARCE1-219ENST00000583294 PCLOQ9Y6V0 5065 aa-0.76□□□□□ -2.53
SMARCE1-219ENST00000583294 STAB2Q8WWQ8 2551 aa-0.77□□□□□ -2.53
SMARCE1-219ENST00000583294 SHANK2Q9UPX8 1470 aa-0.77□□□□□ -2.53
SMARCE1-219ENST00000583294 COMMD6Q7Z4G1 85 aa-0.77□□□□□ -2.53
SMARCE1-219ENST00000583294 LINC00474Q9P2X8 69 aa-0.77□□□□□ -2.53
SMARCE1-219ENST00000583294 EP300Q09472 2414 aaPredicted RBP-0.77□□□□□ -2.53
SMARCE1-219ENST00000583294 PRKDCP78527 4128 aaKnown RBP-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms