RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 MEF2BQ02080 365 aaPredicted RBP9.88□□□□□ -0.83
SREBF1-221ENST00000583080 TEX261Q6UWH6 196 aa9.88□□□□□ -0.83
SREBF1-221ENST00000583080 RNASE7Q9H1E1 156 aaKnown RBP9.88□□□□□ -0.83
SREBF1-221ENST00000583080 RPP21Q9H633 154 aaKnown RBP9.88□□□□□ -0.83
SREBF1-221ENST00000583080 PSORS1C2Q9UIG4 136 aa9.88□□□□□ -0.83
SREBF1-221ENST00000583080 LOC107984640A0A0U1RRK4 108 aa9.87□□□□□ -0.83
SREBF1-221ENST00000583080 HMSDA8MTL9 139 aa9.87□□□□□ -0.83
SREBF1-221ENST00000583080 TMEM101Q96IK0 257 aa9.87□□□□□ -0.83
SREBF1-221ENST00000583080 BTF3L4Q96K17 158 aa9.87□□□□□ -0.83
SREBF1-221ENST00000583080 TMEM242Q9NWH2 141 aa9.87□□□□□ -0.83
SREBF1-221ENST00000583080 IGLV4-69A0A075B6H9 119 aa9.86□□□□□ -0.83
SREBF1-221ENST00000583080 I3L3M4 83 aa9.86□□□□□ -0.83
SREBF1-221ENST00000583080 K7EN84 100 aa9.86□□□□□ -0.83
SREBF1-221ENST00000583080 PDE6DO43924 150 aa9.86□□□□□ -0.83
SREBF1-221ENST00000583080 TSHBP01222 138 aa9.86□□□□□ -0.83
SREBF1-221ENST00000583080 ESDP10768 282 aa9.86□□□□□ -0.83
SREBF1-221ENST00000583080 CD164L2Q6UWJ8 174 aa9.86□□□□□ -0.83
SREBF1-221ENST00000583080 BIN3Q9NQY0 253 aa9.86□□□□□ -0.83
SREBF1-221ENST00000583080 MT-ND6P03923 174 aa9.85□□□□□ -0.83
SREBF1-221ENST00000583080 PMCHP20382 165 aa9.85□□□□□ -0.83
SREBF1-221ENST00000583080 SS18Q15532 418 aa9.85□□□□□ -0.83
SREBF1-221ENST00000583080 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
SREBF1-221ENST00000583080 EIF5AP63241 154 aaKnown RBP9.84□□□□□ -0.83
SREBF1-221ENST00000583080 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
SREBF1-221ENST00000583080 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
SREBF1-221ENST00000583080 PHF5AQ7RTV0 110 aaKnown RBP9.84□□□□□ -0.83
SREBF1-221ENST00000583080 NUP35Q8NFH5 326 aa9.84□□□□□ -0.83
SREBF1-221ENST00000583080 MRAP2Q96G30 205 aa9.84□□□□□ -0.83
SREBF1-221ENST00000583080 CDC42SE2Q9NRR3 84 aa9.84□□□□□ -0.83
SREBF1-221ENST00000583080 TRBV6-5A0A0K0K1A5 114 aa9.83□□□□□ -0.84
SREBF1-221ENST00000583080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.83□□□□□ -0.84
SREBF1-221ENST00000583080 SMIM15Q7Z3B0 74 aa9.83□□□□□ -0.84
SREBF1-221ENST00000583080 ZNF664Q8N3J9 261 aa9.83□□□□□ -0.84
SREBF1-221ENST00000583080 ISOC2Q96AB3 205 aa9.83□□□□□ -0.84
SREBF1-221ENST00000583080 APOMO95445 188 aa9.82□□□□□ -0.84
SREBF1-221ENST00000583080 RPL18AQ02543 176 aaKnown RBP9.82□□□□□ -0.84
SREBF1-221ENST00000583080 EIF5AL1Q6IS14 154 aaKnown RBP9.82□□□□□ -0.84
SREBF1-221ENST00000583080 MRPL52Q86TS9 123 aaKnown RBP9.82□□□□□ -0.84
SREBF1-221ENST00000583080 OCC1Q8TAD7 63 aa9.82□□□□□ -0.84
SREBF1-221ENST00000583080 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
SREBF1-221ENST00000583080 MUC2Q02817 5179 aa9.8□□□□□ -0.84
SREBF1-221ENST00000583080 TEX46H3BTG2 121 aa9.8□□□□□ -0.84
SREBF1-221ENST00000583080 COX7A2LO14548 114 aa9.8□□□□□ -0.84
SREBF1-221ENST00000583080 MALP21145 153 aa9.8□□□□□ -0.84
SREBF1-221ENST00000583080 RNASE13Q5GAN3 156 aaKnown RBP9.8□□□□□ -0.84
SREBF1-221ENST00000583080 ST20Q9HBF5 79 aa9.8□□□□□ -0.84
SREBF1-221ENST00000583080 C7orf77A4D0Y5 90 aa9.79□□□□□ -0.84
SREBF1-221ENST00000583080 KRTAP11-1Q8IUC1 163 aa9.79□□□□□ -0.84
SREBF1-221ENST00000583080 OPRPNQ99935 248 aaPredicted RBP9.79□□□□□ -0.84
SREBF1-221ENST00000583080 IGLV7-43P04211 117 aa9.78□□□□□ -0.84
SREBF1-221ENST00000583080 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
SREBF1-221ENST00000583080 TRBV27A0A0K0K1C4 114 aa9.77□□□□□ -0.85
SREBF1-221ENST00000583080 C5orf38Q86SI9 138 aa9.77□□□□□ -0.85
SREBF1-221ENST00000583080 DIRC1Q969H9 104 aa9.77□□□□□ -0.85
SREBF1-221ENST00000583080 C2orf48Q96LS8 159 aa9.77□□□□□ -0.85
SREBF1-221ENST00000583080 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
SREBF1-221ENST00000583080 C1orf196B1AJZ1 125 aa9.76□□□□□ -0.85
SREBF1-221ENST00000583080 GATCO43716 136 aaKnown RBP9.76□□□□□ -0.85
SREBF1-221ENST00000583080 SPAG11BQ08648 103 aa9.76□□□□□ -0.85
SREBF1-221ENST00000583080 SLC51BQ86UW2 128 aa9.76□□□□□ -0.85
SREBF1-221ENST00000583080 FAM168BA1KXE4 195 aa9.75□□□□□ -0.85
SREBF1-221ENST00000583080 H0Y9J4 135 aa9.75□□□□□ -0.85
SREBF1-221ENST00000583080 UBE2D4Q9Y2X8 147 aa9.75□□□□□ -0.85
SREBF1-221ENST00000583080 SMKR1H3BMG3 65 aa9.74□□□□□ -0.85
SREBF1-221ENST00000583080 KRTAP1-4P0C5Y4 121 aa9.74□□□□□ -0.85
SREBF1-221ENST00000583080 Q6ZUT4 128 aa9.74□□□□□ -0.85
SREBF1-221ENST00000583080 KRTAP9-2Q9BYQ4 174 aa9.74□□□□□ -0.85
SREBF1-221ENST00000583080 A0A087WZ39 114 aa9.73□□□□□ -0.85
SREBF1-221ENST00000583080 A8MWL6 223 aa9.73□□□□□ -0.85
SREBF1-221ENST00000583080 RAB4AP20338 218 aa9.73□□□□□ -0.85
SREBF1-221ENST00000583080 UQCC3Q6UW78 93 aa9.73□□□□□ -0.85
SREBF1-221ENST00000583080 FAM231DQ6ZW35 169 aa9.73□□□□□ -0.85
SREBF1-221ENST00000583080 AMN1Q8IY45 258 aa9.73□□□□□ -0.85
SREBF1-221ENST00000583080 TMEM191AQ9H0A3 160 aa9.73□□□□□ -0.85
SREBF1-221ENST00000583080 FCER1GP30273 86 aa9.72□□□□□ -0.85
SREBF1-221ENST00000583080 RNF151Q2KHN1 245 aa9.72□□□□□ -0.85
SREBF1-221ENST00000583080 COMMD7Q86VX2 200 aa9.72□□□□□ -0.85
SREBF1-221ENST00000583080 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
SREBF1-221ENST00000583080 IGLV1-50A0A075B6I6 118 aa9.71□□□□□ -0.86
SREBF1-221ENST00000583080 PRR4Q16378 134 aa9.71□□□□□ -0.86
SREBF1-221ENST00000583080 CT83Q5H943 113 aa9.71□□□□□ -0.86
SREBF1-221ENST00000583080 FAM19A5Q7Z5A7 132 aaPredicted RBP9.71□□□□□ -0.86
SREBF1-221ENST00000583080 BORCS7Q96B45 105 aa9.71□□□□□ -0.86
SREBF1-221ENST00000583080 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
SREBF1-221ENST00000583080 HIGD1CA8MV81 97 aa9.7□□□□□ -0.86
SREBF1-221ENST00000583080 TAGLN2P37802 199 aaKnown RBP9.7□□□□□ -0.86
SREBF1-221ENST00000583080 C10orf25Q5T742 122 aa9.7□□□□□ -0.86
SREBF1-221ENST00000583080 KRTAP7-1Q8IUC3 87 aa9.7□□□□□ -0.86
SREBF1-221ENST00000583080 OR10D4PQ8NGN7 298 aa9.7□□□□□ -0.86
SREBF1-221ENST00000583080 ORAOV1Q8WV07 137 aa9.7□□□□□ -0.86
SREBF1-221ENST00000583080 MRPL35Q9NZE8 188 aaKnown RBP9.7□□□□□ -0.86
SREBF1-221ENST00000583080 VCYO14598 125 aa9.69□□□□□ -0.86
SREBF1-221ENST00000583080 NRACQ8N912 160 aa9.69□□□□□ -0.86
SREBF1-221ENST00000583080 SUMO2P61956 95 aaKnown RBP9.68□□□□□ -0.86
SREBF1-221ENST00000583080 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
SREBF1-221ENST00000583080 TMEM250H0YL14 139 aa9.67□□□□□ -0.86
SREBF1-221ENST00000583080 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
SREBF1-221ENST00000583080 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
SREBF1-221ENST00000583080 NDUFA1O15239 70 aa9.66□□□□□ -0.86
SREBF1-221ENST00000583080 UBE2D1P51668 147 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms