RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 TIMM21Q9BVV7 248 aa7.74□□□□□ -1.17
TOP3A-214ENST00000582981 IMUPQ9GZP8 106 aa7.74□□□□□ -1.17
TOP3A-214ENST00000582981 IGHV4-59P01825 116 aa7.74□□□□□ -1.17
TOP3A-214ENST00000582981 RNF152Q8N8N0 203 aa7.73□□□□□ -1.17
TOP3A-214ENST00000582981 NBEAL2Q6ZNJ1 2754 aa7.73□□□□□ -1.17
TOP3A-214ENST00000582981 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
TOP3A-214ENST00000582981 NDUFA12Q9UI09 145 aa7.73□□□□□ -1.17
TOP3A-214ENST00000582981 A0A1B0GX51 115 aa7.73□□□□□ -1.17
TOP3A-214ENST00000582981 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
TOP3A-214ENST00000582981 C19orf54Q5BKX5 351 aa7.73□□□□□ -1.17
TOP3A-214ENST00000582981 SDIM1Q6ZPB5 146 aa7.73□□□□□ -1.17
TOP3A-214ENST00000582981 ZNF469Q96JG9 3925 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-214ENST00000582981 ACYP1P07311 99 aa7.72□□□□□ -1.17
TOP3A-214ENST00000582981 DAZ2Q13117 558 aaKnown RBP7.72□□□□□ -1.17
TOP3A-214ENST00000582981 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
TOP3A-214ENST00000582981 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
TOP3A-214ENST00000582981 IGHV3-16A0A0C4DH30 117 aa7.71□□□□□ -1.17
TOP3A-214ENST00000582981 DCANP1Q8TF63 244 aa7.71□□□□□ -1.17
TOP3A-214ENST00000582981 IGHG2P01859 326 aa7.71□□□□□ -1.18
TOP3A-214ENST00000582981 C18orf65Q6ZTR6 163 aa7.71□□□□□ -1.18
TOP3A-214ENST00000582981 ZNF625Q96I27 306 aaPredicted RBP7.71□□□□□ -1.18
TOP3A-214ENST00000582981 LENEPQ9Y5L5 61 aa7.71□□□□□ -1.18
TOP3A-214ENST00000582981 IGKV3D-7A0A0C4DH55 119 aa7.71□□□□□ -1.18
TOP3A-214ENST00000582981 CCL19Q99731 98 aa7.71□□□□□ -1.18
TOP3A-214ENST00000582981 NXPH4O95158 308 aa7.7□□□□□ -1.18
TOP3A-214ENST00000582981 TMEM61Q8N0U2 210 aa7.7□□□□□ -1.18
TOP3A-214ENST00000582981 PEMTQ9UBM1 199 aa7.7□□□□□ -1.18
TOP3A-214ENST00000582981 KLLNB2CW77 178 aa7.7□□□□□ -1.18
TOP3A-214ENST00000582981 DEFB121Q5J5C9 76 aa7.7□□□□□ -1.18
TOP3A-214ENST00000582981 FAM19A4Q96LR4 140 aa7.7□□□□□ -1.18
TOP3A-214ENST00000582981 CD28P10747 220 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 KHDC1LQ5JSQ8 128 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 DPH3Q96FX2 82 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 LITAFQ99732 161 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 HIVEP2P31629 2446 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 RBMY1A1P0DJD3 496 aaKnown RBP7.69□□□□□ -1.18
TOP3A-214ENST00000582981 RBMY1CP0DJD4 496 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 RBMY1FQ15415 496 aaKnown RBP7.69□□□□□ -1.18
TOP3A-214ENST00000582981 LINC01600Q96MT4 127 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 PIMREGQ9BSJ6 248 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 A0A087WVE0 104 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 A6NDX4 124 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 M0QY20 66 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 ATOX1O00244 68 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 BAALC-AS2P0C853 105 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 CRYGAP11844 174 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 MIAQ16674 131 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 DEFB112Q30KQ8 113 aa7.69□□□□□ -1.18
TOP3A-214ENST00000582981 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.68□□□□□ -1.18
TOP3A-214ENST00000582981 IGKV2-29A2NJV5 120 aaPredicted RBP7.68□□□□□ -1.18
TOP3A-214ENST00000582981 C11orf44Q8N8P7 122 aa7.68□□□□□ -1.18
TOP3A-214ENST00000582981 C2orf48Q96LS8 159 aa7.68□□□□□ -1.18
TOP3A-214ENST00000582981 SETXQ7Z333 2677 aaKnown RBP7.68□□□□□ -1.18
TOP3A-214ENST00000582981 IGHV3OR16-12A0A075B7B8 117 aa7.68□□□□□ -1.18
TOP3A-214ENST00000582981 WIPF1O43516 503 aa7.68□□□□□ -1.18
TOP3A-214ENST00000582981 ATP5G1P05496 136 aa7.68□□□□□ -1.18
TOP3A-214ENST00000582981 TIRAPP58753 221 aa7.68□□□□□ -1.18
TOP3A-214ENST00000582981 OXTP01178 125 aa7.67□□□□□ -1.18
TOP3A-214ENST00000582981 C10orf105Q8TEF2 133 aa7.67□□□□□ -1.18
TOP3A-214ENST00000582981 USMG5Q96IX5 58 aa7.67□□□□□ -1.18
TOP3A-214ENST00000582981 GCN1Q92616 2671 aaKnown RBP7.67□□□□□ -1.18
TOP3A-214ENST00000582981 IGLV4-3A0A075B6K6 122 aa7.67□□□□□ -1.18
TOP3A-214ENST00000582981 IGHV4OR15-8A0A075B7B6 117 aa7.67□□□□□ -1.18
TOP3A-214ENST00000582981 A0A087WW49 117 aa7.67□□□□□ -1.18
TOP3A-214ENST00000582981 HOXD3P31249 432 aaPredicted RBP7.67□□□□□ -1.18
TOP3A-214ENST00000582981 RPS28P62857 69 aaKnown RBP7.67□□□□□ -1.18
TOP3A-214ENST00000582981 Q9HAA7 133 aa7.67□□□□□ -1.18
TOP3A-214ENST00000582981 FLNAP21333 2647 aaKnown RBP7.67□□□□□ -1.18
TOP3A-214ENST00000582981 IGHV1OR15-1A0A075B7D0 117 aa7.67□□□□□ -1.18
TOP3A-214ENST00000582981 A0A0J9YX75 114 aa7.66□□□□□ -1.18
TOP3A-214ENST00000582981 TRBV27A0A0K0K1C4 114 aa7.66□□□□□ -1.18
TOP3A-214ENST00000582981 MSMBP08118 114 aa7.66□□□□□ -1.18
TOP3A-214ENST00000582981 SLURP1P55000 103 aa7.66□□□□□ -1.18
TOP3A-214ENST00000582981 DEFB131AP59861 70 aa7.66□□□□□ -1.18
TOP3A-214ENST00000582981 Q6ZSN1 163 aa7.66□□□□□ -1.18
TOP3A-214ENST00000582981 PRORYQ9H606 182 aa7.66□□□□□ -1.18
TOP3A-214ENST00000582981 KLK9Q2XQG4 91 aa7.65□□□□□ -1.18
TOP3A-214ENST00000582981 IGLV1-40P01703 118 aa7.65□□□□□ -1.18
TOP3A-214ENST00000582981 SNRPD3P62318 126 aaKnown RBP7.65□□□□□ -1.18
TOP3A-214ENST00000582981 C5orf38Q86SI9 138 aa7.65□□□□□ -1.18
TOP3A-214ENST00000582981 APRG1Q8IVJ8 170 aa7.65□□□□□ -1.18
TOP3A-214ENST00000582981 C20orf203Q8NBC4 194 aa7.65□□□□□ -1.18
TOP3A-214ENST00000582981 DNAL4O96015 105 aa7.65□□□□□ -1.19
TOP3A-214ENST00000582981 NBPF19A0A087WUL8 3843 aa7.64□□□□□ -1.19
TOP3A-214ENST00000582981 IGHV1-58A0A0C4DH39 117 aa7.64□□□□□ -1.19
TOP3A-214ENST00000582981 TMEM258P61165 79 aa7.64□□□□□ -1.19
TOP3A-214ENST00000582981 RPL18AQ02543 176 aaKnown RBP7.64□□□□□ -1.19
TOP3A-214ENST00000582981 Q8N2B8 174 aa7.64□□□□□ -1.19
TOP3A-214ENST00000582981 CITED2Q99967 270 aaPredicted RBP7.64□□□□□ -1.19
TOP3A-214ENST00000582981 C9orf85Q96MD7 179 aa7.64□□□□□ -1.19
TOP3A-214ENST00000582981 SPANXDQ9BXN6 97 aa7.64□□□□□ -1.19
TOP3A-214ENST00000582981 SPANXCQ9NY87 97 aa7.64□□□□□ -1.19
TOP3A-214ENST00000582981 COX7A2LO14548 114 aa7.63□□□□□ -1.19
TOP3A-214ENST00000582981 MED14OSP0DP75 135 aa7.63□□□□□ -1.19
TOP3A-214ENST00000582981 CXCL5P42830 114 aa7.63□□□□□ -1.19
TOP3A-214ENST00000582981 HIST1H4AP62805 103 aaKnown RBP7.63□□□□□ -1.19
TOP3A-214ENST00000582981 IGHV3-53P01767 116 aa7.63□□□□□ -1.19
TOP3A-214ENST00000582981 CFHR3Q02985 330 aa7.63□□□□□ -1.19
TOP3A-214ENST00000582981 ITPR3Q14573 2671 aa7.63□□□□□ -1.19
TOP3A-214ENST00000582981 PRB1P04280 392 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms