RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 LYRM9A8MSI8 78 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 MIFP14174 115 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 RPL36AP83881 106 aaKnown RBP7.2□□□□□ -1.26
SS18-221ENST00000582448 C2orf66Q6UXQ4 117 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 TEX43Q6ZNM6 134 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 OR11H2Q8NH07 326 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 RPL36ALQ969Q0 106 aaKnown RBP7.2□□□□□ -1.26
SS18-221ENST00000582448 C18orf15Q96N68 181 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
SS18-221ENST00000582448 KIAA1109Q2LD37 5005 aa7.19□□□□□ -1.26
SS18-221ENST00000582448 TEX48A0A1B0GUV7 120 aa7.19□□□□□ -1.26
SS18-221ENST00000582448 K7EQD1 137 aa7.19□□□□□ -1.26
SS18-221ENST00000582448 LINC00173Q6ZV60 143 aa7.19□□□□□ -1.26
SS18-221ENST00000582448 NEGR1Q7Z3B1 354 aa7.19□□□□□ -1.26
SS18-221ENST00000582448 TOMM6Q96B49 74 aa7.19□□□□□ -1.26
SS18-221ENST00000582448 ZNF479Q96JC4 524 aa7.19□□□□□ -1.26
SS18-221ENST00000582448 PLAC8L1A1L4L8 177 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 DEFB130BP0DP73 79 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 DEFB130AP0DP74 79 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 COTL1Q14019 142 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 LINC01545Q5VT33 79 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 LINC00336Q6ZUF6 198 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 ERASQ7Z444 233 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 TMEM141Q96I45 108 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 PRADC1Q9BSG0 188 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 APLNQ9ULZ1 77 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 RYR1P21817 5038 aa7.18□□□□□ -1.26
SS18-221ENST00000582448 TRAV9-2A0A087WT02 112 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 TRBV6-4A0A1B0GX49 114 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 M0R2N4 97 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 SMAGPQ0VAQ4 97 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 SPATA45Q537H7 98 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 PAPPA-AS1Q5QFB9 102 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 Q8N976 141 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 NEXN-AS1Q8NBZ9 246 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 PAM16Q9Y3D7 125 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 MUC4Q99102 2169 aa7.17□□□□□ -1.26
SS18-221ENST00000582448 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 TRBV7-3A0A075B6L6 115 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 IGHV4-28A0A0C4DH34 117 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 TSHBP01222 138 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 SPART-AS1P0CW21 52 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 P0DMU3 169 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 FAM231AP0DMU4 169 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 FAM231CP0DMU5 169 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 TCTAP57738 103 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 DAZ4Q86SG3 579 aaKnown RBP7.16□□□□□ -1.26
SS18-221ENST00000582448 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 ZNRF2Q8NHG8 242 aa7.16□□□□□ -1.26
SS18-221ENST00000582448 DAZ3Q9NR90 486 aaKnown RBP7.16□□□□□ -1.26
SS18-221ENST00000582448 TRAV12-1A0A0B4J245 112 aa7.15□□□□□ -1.26
SS18-221ENST00000582448 PLNP26678 52 aa7.15□□□□□ -1.26
SS18-221ENST00000582448 DAD1P61803 113 aa7.15□□□□□ -1.26
SS18-221ENST00000582448 FAM222AQ5U5X8 452 aa7.15□□□□□ -1.26
SS18-221ENST00000582448 ZNF664Q8N3J9 261 aa7.15□□□□□ -1.26
SS18-221ENST00000582448 SLC25A29Q8N8R3 303 aa7.15□□□□□ -1.26
SS18-221ENST00000582448 TIMM17AQ99595 171 aa7.15□□□□□ -1.26
SS18-221ENST00000582448 PRO1933Q9H354 126 aa7.15□□□□□ -1.26
SS18-221ENST00000582448 C11orf68Q9H3H3 251 aaKnown RBP7.15□□□□□ -1.26
SS18-221ENST00000582448 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 GAGE12JA6NER3 117 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 DPM2O94777 84 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 GAGE1Q13065 139 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 GAGE4Q13068 117 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 GAGE5Q13069 117 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 TMEM97Q5BJF2 176 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 LINC00612Q8N6U2 182 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 C20orf203Q8NBC4 194 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 PMCHL2Q9BQD1 86 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 HHLA3Q9XRX5 114 aa7.14□□□□□ -1.27
SS18-221ENST00000582448 A0A087WX48 190 aa7.13□□□□□ -1.27
SS18-221ENST00000582448 IGKCP01834 107 aa7.13□□□□□ -1.27
SS18-221ENST00000582448 DDTP30046 118 aa7.13□□□□□ -1.27
SS18-221ENST00000582448 TIRAPP58753 221 aa7.13□□□□□ -1.27
SS18-221ENST00000582448 DEFB104AQ8WTQ1 72 aa7.13□□□□□ -1.27
SS18-221ENST00000582448 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
SS18-221ENST00000582448 ATP5G1P05496 136 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 PMVKQ15126 192 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 DGAT2L7PQ6IED9 249 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 Q6ZTC4 211 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 Q8NAQ8 132 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 BAALCQ8WXS3 180 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 SPANXA1Q9NS26 97 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 PRO0255Q9UI72 69 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 DNAH6Q9C0G6 4158 aa7.12□□□□□ -1.27
SS18-221ENST00000582448 TRAV10A0A0B4J240 114 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 IGHV3-38A0A0C4DH36 116 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 IGIPA6NJ69 53 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 F8VRH5 84 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 UBE2L6O14933 153 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 RTL8CO15255 209 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 CRYBA4P53673 196 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 UBE2D3P61077 147 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 UBE2D2P62837 147 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 RPL39P62891 51 aaKnown RBP7.11□□□□□ -1.27
SS18-221ENST00000582448 Q8N9P0 234 aaPredicted RBP7.11□□□□□ -1.27
SS18-221ENST00000582448 MIEN1Q9BRT3 115 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 GTSF1LQ9H1H1 148 aa7.11□□□□□ -1.27
SS18-221ENST00000582448 VCX2Q9H322 139 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms