RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PKIGQ9Y2B9 76 aa13.03□□□□□ -0.32
SMG8-204ENST00000580498 RPS10P46783 165 aaKnown RBP13.02□□□□□ -0.33
SMG8-204ENST00000580498 HBBP68871 147 aa13.02□□□□□ -0.33
SMG8-204ENST00000580498 SRSF3P84103 164 aaKnown RBP13.02□□□□□ -0.33
SMG8-204ENST00000580498 MRPL52Q86TS9 123 aaKnown RBP13.02□□□□□ -0.33
SMG8-204ENST00000580498 SMKR1H3BMG3 65 aa13.01□□□□□ -0.33
SMG8-204ENST00000580498 GAS8-AS1O95177 125 aa13□□□□□ -0.33
SMG8-204ENST00000580498 MRPL51Q4U2R6 128 aaKnown RBP13□□□□□ -0.33
SMG8-204ENST00000580498 C20orf78Q9BR46 151 aa13□□□□□ -0.33
SMG8-204ENST00000580498 CCL25O15444 150 aa12.99□□□□□ -0.33
SMG8-204ENST00000580498 XCL1P47992 114 aa12.99□□□□□ -0.33
SMG8-204ENST00000580498 PNRC1Q12796 327 aaPredicted RBP12.99□□□□□ -0.33
SMG8-204ENST00000580498 MRPL54Q6P161 138 aaKnown RBP12.99□□□□□ -0.33
SMG8-204ENST00000580498 ZNF664Q8N3J9 261 aa12.99□□□□□ -0.33
SMG8-204ENST00000580498 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
SMG8-204ENST00000580498 J3QL48 77 aa12.98□□□□□ -0.33
SMG8-204ENST00000580498 PPBPP02775 128 aa12.98□□□□□ -0.33
SMG8-204ENST00000580498 NRACQ8N912 160 aa12.98□□□□□ -0.33
SMG8-204ENST00000580498 HIGD2BQ4VC39 106 aa12.97□□□□□ -0.33
SMG8-204ENST00000580498 SDIM1Q6ZPB5 146 aa12.97□□□□□ -0.33
SMG8-204ENST00000580498 ATP5L2Q7Z4Y8 100 aa12.97□□□□□ -0.33
SMG8-204ENST00000580498 CDC42SE2Q9NRR3 84 aa12.97□□□□□ -0.33
SMG8-204ENST00000580498 CSDC2Q9Y534 153 aaKnown RBP12.97□□□□□ -0.33
SMG8-204ENST00000580498 IGHV1-58A0A0C4DH39 117 aa12.96□□□□□ -0.33
SMG8-204ENST00000580498 RPL37AP61513 92 aaKnown RBP12.96□□□□□ -0.33
SMG8-204ENST00000580498 C15orf56Q8N910 161 aa12.96□□□□□ -0.33
SMG8-204ENST00000580498 GVQW2A0A096LPI5 108 aaPredicted RBP12.95□□□□□ -0.34
SMG8-204ENST00000580498 C1orf196B1AJZ1 125 aa12.95□□□□□ -0.34
SMG8-204ENST00000580498 MT-ND4LP03901 98 aa12.95□□□□□ -0.34
SMG8-204ENST00000580498 RPL32P62910 135 aaKnown RBP12.95□□□□□ -0.34
SMG8-204ENST00000580498 CD164L2Q6UWJ8 174 aa12.95□□□□□ -0.34
SMG8-204ENST00000580498 SRRM2Q9UQ35 2752 aaKnown RBP12.94□□□□□ -0.34
SMG8-204ENST00000580498 TRBV24-1A0A075B6N3 115 aa12.94□□□□□ -0.34
SMG8-204ENST00000580498 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
SMG8-204ENST00000580498 PHOX2AO14813 284 aa12.94□□□□□ -0.34
SMG8-204ENST00000580498 TNFRSF6BO95407 300 aa12.94□□□□□ -0.34
SMG8-204ENST00000580498 MALP21145 153 aa12.94□□□□□ -0.34
SMG8-204ENST00000580498 FOXI1Q12951 378 aa12.94□□□□□ -0.34
SMG8-204ENST00000580498 ANAPC16Q96DE5 110 aa12.94□□□□□ -0.34
SMG8-204ENST00000580498 FAT1Q14517 4588 aa12.93□□□□□ -0.34
SMG8-204ENST00000580498 D6R8Y8 96 aa12.93□□□□□ -0.34
SMG8-204ENST00000580498 ORMDL3Q8N138 153 aa12.93□□□□□ -0.34
SMG8-204ENST00000580498 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.93□□□□□ -0.34
SMG8-204ENST00000580498 DMBT1Q9UGM3 2413 aaPredicted RBP12.92□□□□□ -0.34
SMG8-204ENST00000580498 FLG2Q5D862 2391 aaPredicted RBP12.92□□□□□ -0.34
SMG8-204ENST00000580498 RAB5AP20339 215 aa12.92□□□□□ -0.34
SMG8-204ENST00000580498 TIMM21Q9BVV7 248 aa12.92□□□□□ -0.34
SMG8-204ENST00000580498 SMIM2Q9BVW6 85 aa12.92□□□□□ -0.34
SMG8-204ENST00000580498 UBE2D4Q9Y2X8 147 aa12.92□□□□□ -0.34
SMG8-204ENST00000580498 A0A1B0GXF2 115 aa12.91□□□□□ -0.34
SMG8-204ENST00000580498 COX7A2LO14548 114 aa12.9□□□□□ -0.34
SMG8-204ENST00000580498 APOMO95445 188 aa12.9□□□□□ -0.34
SMG8-204ENST00000580498 LINC00474Q9P2X8 69 aa12.9□□□□□ -0.34
SMG8-204ENST00000580498 TRAV13-1A0A0B4J241 112 aa12.89□□□□□ -0.35
SMG8-204ENST00000580498 SLPIP03973 132 aa12.89□□□□□ -0.35
SMG8-204ENST00000580498 TMEM136Q6ZRR5 245 aa12.89□□□□□ -0.35
SMG8-204ENST00000580498 C7orf33Q8WU49 177 aa12.89□□□□□ -0.35
SMG8-204ENST00000580498 SPANXA1Q9NS26 97 aa12.89□□□□□ -0.35
SMG8-204ENST00000580498 DNAH8Q96JB1 4490 aa12.89□□□□□ -0.35
SMG8-204ENST00000580498 COX6A2Q02221 97 aa12.88□□□□□ -0.35
SMG8-204ENST00000580498 CIRBPQ14011 172 aaKnown RBP12.88□□□□□ -0.35
SMG8-204ENST00000580498 CARD19Q96LW7 228 aa12.88□□□□□ -0.35
SMG8-204ENST00000580498 LAMTOR2Q9Y2Q5 125 aa12.88□□□□□ -0.35
SMG8-204ENST00000580498 VPS13BQ7Z7G8 4022 aa12.88□□□□□ -0.35
SMG8-204ENST00000580498 NPYP01303 97 aa12.87□□□□□ -0.35
SMG8-204ENST00000580498 CLLU1Q5K131 121 aa12.87□□□□□ -0.35
SMG8-204ENST00000580498 SPACA4Q8TDM5 124 aa12.87□□□□□ -0.35
SMG8-204ENST00000580498 PRELID3AQ96N28 172 aa12.87□□□□□ -0.35
SMG8-204ENST00000580498 MAJINQ3KP22 176 aa12.86□□□□□ -0.35
SMG8-204ENST00000580498 A0A087WYN8 130 aa12.85□□□□□ -0.35
SMG8-204ENST00000580498 IGKV2-24A0A0C4DH68 120 aa12.85□□□□□ -0.35
SMG8-204ENST00000580498 IFI27P40305 119 aaPredicted RBP12.85□□□□□ -0.35
SMG8-204ENST00000580498 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
SMG8-204ENST00000580498 Q6ZUT4 128 aa12.85□□□□□ -0.35
SMG8-204ENST00000580498 MAP1LC3AQ9H492 121 aa12.85□□□□□ -0.35
SMG8-204ENST00000580498 KRTAP29-1A8MX34 341 aaPredicted RBP12.84□□□□□ -0.35
SMG8-204ENST00000580498 CHTF8P0CG12 524 aa12.84□□□□□ -0.35
SMG8-204ENST00000580498 RNASE13Q5GAN3 156 aaKnown RBP12.84□□□□□ -0.35
SMG8-204ENST00000580498 UQCC3Q6UW78 93 aa12.84□□□□□ -0.35
SMG8-204ENST00000580498 PANO1I0J062 215 aa12.83□□□□□ -0.36
SMG8-204ENST00000580498 OXTP01178 125 aa12.82□□□□□ -0.36
SMG8-204ENST00000580498 RPL39P62891 51 aaKnown RBP12.82□□□□□ -0.36
SMG8-204ENST00000580498 MRPS36P82909 103 aaKnown RBP12.82□□□□□ -0.36
SMG8-204ENST00000580498 PRSS3P2Q8NHM4 247 aa12.82□□□□□ -0.36
SMG8-204ENST00000580498 IFITM10A6NMD0 228 aa12.81□□□□□ -0.36
SMG8-204ENST00000580498 CAMK2N2Q96S95 79 aa12.81□□□□□ -0.36
SMG8-204ENST00000580498 CTDSP1Q9GZU7 261 aa12.81□□□□□ -0.36
SMG8-204ENST00000580498 PLAC8Q9NZF1 115 aa12.81□□□□□ -0.36
SMG8-204ENST00000580498 IGLV4-69A0A075B6H9 119 aa12.8□□□□□ -0.36
SMG8-204ENST00000580498 STPG4Q8N801 248 aa12.8□□□□□ -0.36
SMG8-204ENST00000580498 IMMP2LQ96T52 175 aa12.8□□□□□ -0.36
SMG8-204ENST00000580498 G0S2P27469 103 aa12.79□□□□□ -0.36
SMG8-204ENST00000580498 C5orf38Q86SI9 138 aa12.79□□□□□ -0.36
SMG8-204ENST00000580498 LINC00526Q96FQ7 95 aa12.79□□□□□ -0.36
SMG8-204ENST00000580498 TGIF2-C20orf24A0A0A6YYL0 155 aa12.78□□□□□ -0.36
SMG8-204ENST00000580498 LOC107984640A0A0U1RRK4 108 aa12.78□□□□□ -0.36
SMG8-204ENST00000580498 LOC389332A0A1B0GUA5 103 aa12.78□□□□□ -0.36
SMG8-204ENST00000580498 KRTAP10-4P60372 401 aaPredicted RBP12.78□□□□□ -0.36
SMG8-204ENST00000580498 Q6ZN92 141 aa12.78□□□□□ -0.36
SMG8-204ENST00000580498 OR10D4PQ8NGN7 298 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms