RNA–Protein interactions for RNA: ENST00000580263.5

ACADVL-223, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-223	ENST00000580263	CNBP	P62633	177 aa	Known RBP	14.03	□□□□□ -0.16
ACADVL-223	ENST00000580263	MRPL52	Q86TS9	123 aa	Known RBP	14.03	□□□□□ -0.16
ACADVL-223	ENST00000580263	LINC00862	A6NCI5	91 aa		14.02	□□□□□ -0.17
ACADVL-223	ENST00000580263	PPP1R2P9	O14990	202 aa		14.02	□□□□□ -0.17
ACADVL-223	ENST00000580263	S100A8	P05109	93 aa		14.02	□□□□□ -0.17
ACADVL-223	ENST00000580263	CLLU1	Q5K131	121 aa		14.02	□□□□□ -0.17
ACADVL-223	ENST00000580263	CDC42SE2	Q9NRR3	84 aa		14.02	□□□□□ -0.17
ACADVL-223	ENST00000580263	LINC00959	A0A1B0GUT2	108 aa		14.01	□□□□□ -0.17
ACADVL-223	ENST00000580263		D6R8Y8	96 aa		14.01	□□□□□ -0.17
ACADVL-223	ENST00000580263	KIR2DL4	Q99706	377 aa		14.01	□□□□□ -0.17
ACADVL-223	ENST00000580263	AP5S1	Q9NUS5	200 aa		14.01	□□□□□ -0.17
ACADVL-223	ENST00000580263	TRBV24-1	A0A075B6N3	115 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263		F8W036	122 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263	PANO1	I0J062	215 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263	TNFRSF6B	O95407	300 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263	XCL1	P47992	114 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263	PNRC1	Q12796	327 aa	Predicted RBP	14	□□□□□ -0.17
ACADVL-223	ENST00000580263	FOXI1	Q12951	378 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263	HIGD2B	Q4VC39	106 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263	SDIM1	Q6ZPB5	146 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263	C20orf78	Q9BR46	151 aa		14	□□□□□ -0.17
ACADVL-223	ENST00000580263	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	14	□□□□□ -0.17
ACADVL-223	ENST00000580263	CCL25	O15444	150 aa		13.99	□□□□□ -0.17
ACADVL-223	ENST00000580263	NPY	P01303	97 aa		13.99	□□□□□ -0.17
ACADVL-223	ENST00000580263	IFITM2	Q01629	132 aa		13.99	□□□□□ -0.17
ACADVL-223	ENST00000580263	CFAP161	Q6P656	301 aa		13.99	□□□□□ -0.17
ACADVL-223	ENST00000580263	ZNF664	Q8N3J9	261 aa		13.99	□□□□□ -0.17
ACADVL-223	ENST00000580263	PLA2G1B	P04054	148 aa	Known RBP	13.98	□□□□□ -0.17
ACADVL-223	ENST00000580263	ATP5L2	Q7Z4Y8	100 aa		13.98	□□□□□ -0.17
ACADVL-223	ENST00000580263	UBE2D4	Q9Y2X8	147 aa		13.98	□□□□□ -0.17
ACADVL-223	ENST00000580263	RPL32	P62910	135 aa	Known RBP	13.97	□□□□□ -0.17
ACADVL-223	ENST00000580263	SMIM2	Q9BVW6	85 aa		13.97	□□□□□ -0.17
ACADVL-223	ENST00000580263	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.96	□□□□□ -0.17
ACADVL-223	ENST00000580263	MT-ND4L	P03901	98 aa		13.96	□□□□□ -0.17
ACADVL-223	ENST00000580263	RNASE13	Q5GAN3	156 aa	Known RBP	13.96	□□□□□ -0.17
ACADVL-223	ENST00000580263	ANAPC16	Q96DE5	110 aa		13.96	□□□□□ -0.17
ACADVL-223	ENST00000580263	IGHV3-64	A0A075B6Q5	118 aa		13.95	□□□□□ -0.18
ACADVL-223	ENST00000580263	SS18	Q15532	418 aa		13.95	□□□□□ -0.18
ACADVL-223	ENST00000580263	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.94	□□□□□ -0.18
ACADVL-223	ENST00000580263	CSDC2	Q9Y534	153 aa	Known RBP	13.94	□□□□□ -0.18
ACADVL-223	ENST00000580263	MYCBP2	O75592	4640 aa		13.94	□□□□□ -0.18
ACADVL-223	ENST00000580263	PPBP	P02775	128 aa		13.93	□□□□□ -0.18
ACADVL-223	ENST00000580263	KRTAP10-4	P60372	401 aa	Predicted RBP	13.93	□□□□□ -0.18
ACADVL-223	ENST00000580263	RPL39	P62891	51 aa	Known RBP	13.93	□□□□□ -0.18
ACADVL-223	ENST00000580263		Q6ZUT4	128 aa		13.93	□□□□□ -0.18
ACADVL-223	ENST00000580263	PHOX2A	O14813	284 aa		13.92	□□□□□ -0.18
ACADVL-223	ENST00000580263	TCAP	O15273	167 aa		13.92	□□□□□ -0.18
ACADVL-223	ENST00000580263	CHTF8	P0CG12	524 aa		13.92	□□□□□ -0.18
ACADVL-223	ENST00000580263	ADCYAP1	P18509	176 aa		13.92	□□□□□ -0.18
ACADVL-223	ENST00000580263	SMAGP	Q0VAQ4	97 aa		13.92	□□□□□ -0.18
ACADVL-223	ENST00000580263	TMEM136	Q6ZRR5	245 aa		13.92	□□□□□ -0.18
ACADVL-223	ENST00000580263	ORMDL3	Q8N138	153 aa		13.92	□□□□□ -0.18
ACADVL-223	ENST00000580263	CIRBP	Q14011	172 aa	Known RBP	13.91	□□□□□ -0.18
ACADVL-223	ENST00000580263	CD164L2	Q6UWJ8	174 aa		13.91	□□□□□ -0.18
ACADVL-223	ENST00000580263	TMEM18	Q96B42	140 aa		13.91	□□□□□ -0.18
ACADVL-223	ENST00000580263	LINC00526	Q96FQ7	95 aa		13.91	□□□□□ -0.18
ACADVL-223	ENST00000580263	PRELID3A	Q96N28	172 aa		13.91	□□□□□ -0.18
ACADVL-223	ENST00000580263	TIMM21	Q9BVV7	248 aa		13.91	□□□□□ -0.18
ACADVL-223	ENST00000580263	IGHV1-58	A0A0C4DH39	117 aa		13.9	□□□□□ -0.18
ACADVL-223	ENST00000580263	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.9	□□□□□ -0.18
ACADVL-223	ENST00000580263	TRAV13-1	A0A0B4J241	112 aa		13.89	□□□□□ -0.19
ACADVL-223	ENST00000580263	C1orf196	B1AJZ1	125 aa		13.88	□□□□□ -0.19
ACADVL-223	ENST00000580263	COX6A2	Q02221	97 aa		13.88	□□□□□ -0.19
ACADVL-223	ENST00000580263	UQCC3	Q6UW78	93 aa		13.88	□□□□□ -0.19
ACADVL-223	ENST00000580263	FAM104A	Q969W3	186 aa		13.88	□□□□□ -0.19
ACADVL-223	ENST00000580263	TMEM218	A2RU14	115 aa		13.87	□□□□□ -0.19
ACADVL-223	ENST00000580263	PRSS3P2	Q8NHM4	247 aa		13.87	□□□□□ -0.19
ACADVL-223	ENST00000580263	OPRPN	Q99935	248 aa	Predicted RBP	13.87	□□□□□ -0.19
ACADVL-223	ENST00000580263	SPACA4	Q8TDM5	124 aa		13.86	□□□□□ -0.19
ACADVL-223	ENST00000580263		A0A087WYN8	130 aa		13.85	□□□□□ -0.19
ACADVL-223	ENST00000580263	DPH3	Q96FX2	82 aa		13.85	□□□□□ -0.19
ACADVL-223	ENST00000580263	LOC389332	A0A1B0GUA5	103 aa		13.84	□□□□□ -0.19
ACADVL-223	ENST00000580263	RPL37A	P61513	92 aa	Known RBP	13.84	□□□□□ -0.19
ACADVL-223	ENST00000580263	SPANXA1	Q9NS26	97 aa		13.84	□□□□□ -0.19
ACADVL-223	ENST00000580263	COX7A2L	O14548	114 aa		13.83	□□□□□ -0.2
ACADVL-223	ENST00000580263	RAB5A	P20339	215 aa		13.83	□□□□□ -0.2
ACADVL-223	ENST00000580263	LAMTOR2	Q9Y2Q5	125 aa		13.83	□□□□□ -0.2
ACADVL-223	ENST00000580263	IGKV2-24	A0A0C4DH68	120 aa		13.82	□□□□□ -0.2
ACADVL-223	ENST00000580263	PRSS47	A8MTI9	375 aa		13.82	□□□□□ -0.2
ACADVL-223	ENST00000580263	ZNF561-AS1	K7EIQ3	104 aa		13.82	□□□□□ -0.2
ACADVL-223	ENST00000580263	MAL	P21145	153 aa		13.82	□□□□□ -0.2
ACADVL-223	ENST00000580263	C5orf38	Q86SI9	138 aa		13.82	□□□□□ -0.2
ACADVL-223	ENST00000580263	CARD19	Q96LW7	228 aa		13.82	□□□□□ -0.2
ACADVL-223	ENST00000580263	MAP1LC3A	Q9H492	121 aa		13.82	□□□□□ -0.2
ACADVL-223	ENST00000580263	MRPS36	P82909	103 aa	Known RBP	13.81	□□□□□ -0.2
ACADVL-223	ENST00000580263	COMMD7	Q86VX2	200 aa		13.81	□□□□□ -0.2
ACADVL-223	ENST00000580263	IMMP2L	Q96T52	175 aa		13.81	□□□□□ -0.2
ACADVL-223	ENST00000580263		A0A096LNI7	61 aa		13.8	□□□□□ -0.2
ACADVL-223	ENST00000580263	HERC1	Q15751	4861 aa		13.8	□□□□□ -0.2
ACADVL-223	ENST00000580263	IGLV4-69	A0A075B6H9	119 aa		13.79	□□□□□ -0.2
ACADVL-223	ENST00000580263	SYCN	Q0VAF6	134 aa		13.79	□□□□□ -0.2
ACADVL-223	ENST00000580263	MAJIN	Q3KP22	176 aa		13.79	□□□□□ -0.2
ACADVL-223	ENST00000580263		Q8N8P6	123 aa		13.79	□□□□□ -0.2
ACADVL-223	ENST00000580263	SEC11C	Q9BY50	192 aa		13.79	□□□□□ -0.2
ACADVL-223	ENST00000580263	CTDSP1	Q9GZU7	261 aa		13.79	□□□□□ -0.2
ACADVL-223	ENST00000580263	PLAC8	Q9NZF1	115 aa		13.79	□□□□□ -0.2
ACADVL-223	ENST00000580263	IFITM10	A6NMD0	228 aa		13.78	□□□□□ -0.2
ACADVL-223	ENST00000580263	HNRNPA3	P51991	378 aa	Known RBP	13.78	□□□□□ -0.2
ACADVL-223	ENST00000580263	PKHD1L1	Q86WI1	4243 aa		13.77	□□□□□ -0.2
ACADVL-223	ENST00000580263	IFI27	P40305	119 aa	Predicted RBP	13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms