RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 SCXQ7RTU7 201 aa16.98■□□□□ 0.31
LIMD2-208ENST00000579814 C20orf78Q9BR46 151 aa16.98■□□□□ 0.31
LIMD2-208ENST00000579814 A0A1B0GXF2 115 aa16.97■□□□□ 0.31
LIMD2-208ENST00000579814 MRPL52Q86TS9 123 aaKnown RBP16.97■□□□□ 0.31
LIMD2-208ENST00000579814 TRBV24-1A0A075B6N3 115 aa16.96■□□□□ 0.31
LIMD2-208ENST00000579814 SMAGPQ0VAQ4 97 aa16.96■□□□□ 0.31
LIMD2-208ENST00000579814 MT-ND4LP03901 98 aa16.95■□□□□ 0.3
LIMD2-208ENST00000579814 CNBPP62633 177 aaKnown RBP16.95■□□□□ 0.3
LIMD2-208ENST00000579814 ATP5L2Q7Z4Y8 100 aa16.95■□□□□ 0.3
LIMD2-208ENST00000579814 ANAPC16Q96DE5 110 aa16.95■□□□□ 0.3
LIMD2-208ENST00000579814 ZNF664Q8N3J9 261 aa16.94■□□□□ 0.3
LIMD2-208ENST00000579814 CDC42SE2Q9NRR3 84 aa16.94■□□□□ 0.3
LIMD2-208ENST00000579814 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.93■□□□□ 0.3
LIMD2-208ENST00000579814 TNFRSF6BO95407 300 aa16.93■□□□□ 0.3
LIMD2-208ENST00000579814 RPL32P62910 135 aaKnown RBP16.93■□□□□ 0.3
LIMD2-208ENST00000579814 LINC00528Q8N1L1 170 aa16.93■□□□□ 0.3
LIMD2-208ENST00000579814 CIRBP-AS1Q8TBR5 109 aa16.93■□□□□ 0.3
LIMD2-208ENST00000579814 LINC00959A0A1B0GUT2 108 aa16.92■□□□□ 0.3
LIMD2-208ENST00000579814 D6R8Y8 96 aa16.92■□□□□ 0.3
LIMD2-208ENST00000579814 TCAPO15273 167 aa16.92■□□□□ 0.3
LIMD2-208ENST00000579814 PPBPP02775 128 aa16.92■□□□□ 0.3
LIMD2-208ENST00000579814 PLA2G1BP04054 148 aaKnown RBP16.92■□□□□ 0.3
LIMD2-208ENST00000579814 TMEM18Q96B42 140 aa16.92■□□□□ 0.3
LIMD2-208ENST00000579814 XCL1P47992 114 aa16.91■□□□□ 0.3
LIMD2-208ENST00000579814 SS18Q15532 418 aa16.91■□□□□ 0.3
LIMD2-208ENST00000579814 SDIM1Q6ZPB5 146 aa16.9■□□□□ 0.3
LIMD2-208ENST00000579814 C15orf56Q8N910 161 aa16.9■□□□□ 0.3
LIMD2-208ENST00000579814 CSDC2Q9Y534 153 aaKnown RBP16.9■□□□□ 0.3
LIMD2-208ENST00000579814 PHOX2AO14813 284 aa16.89■□□□□ 0.29
LIMD2-208ENST00000579814 CCL25O15444 150 aa16.89■□□□□ 0.29
LIMD2-208ENST00000579814 FOXI1Q12951 378 aa16.89■□□□□ 0.29
LIMD2-208ENST00000579814 SLPIP03973 132 aa16.88■□□□□ 0.29
LIMD2-208ENST00000579814 SMIM2Q9BVW6 85 aa16.88■□□□□ 0.29
LIMD2-208ENST00000579814 UBE2D4Q9Y2X8 147 aa16.88■□□□□ 0.29
LIMD2-208ENST00000579814 IGHV3-64A0A075B6Q5 118 aa16.87■□□□□ 0.29
LIMD2-208ENST00000579814 IFITM2Q01629 132 aa16.87■□□□□ 0.29
LIMD2-208ENST00000579814 UQCC3Q6UW78 93 aa16.87■□□□□ 0.29
LIMD2-208ENST00000579814 TMEM136Q6ZRR5 245 aa16.87■□□□□ 0.29
LIMD2-208ENST00000579814 ORMDL3Q8N138 153 aa16.87■□□□□ 0.29
LIMD2-208ENST00000579814 NPYP01303 97 aa16.86■□□□□ 0.29
LIMD2-208ENST00000579814 HIGD2BQ4VC39 106 aa16.86■□□□□ 0.29
LIMD2-208ENST00000579814 VPS13BQ7Z7G8 4022 aa16.85■□□□□ 0.29
LIMD2-208ENST00000579814 CD164L2Q6UWJ8 174 aa16.85■□□□□ 0.29
LIMD2-208ENST00000579814 TIMM21Q9BVV7 248 aa16.85■□□□□ 0.29
LIMD2-208ENST00000579814 PRELID3AQ96N28 172 aa16.84■□□□□ 0.29
LIMD2-208ENST00000579814 GVQW2A0A096LPI5 108 aaPredicted RBP16.83■□□□□ 0.28
LIMD2-208ENST00000579814 C1orf196B1AJZ1 125 aa16.83■□□□□ 0.28
LIMD2-208ENST00000579814 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.83■□□□□ 0.28
LIMD2-208ENST00000579814 IGHV1-58A0A0C4DH39 117 aa16.81■□□□□ 0.28
LIMD2-208ENST00000579814 TMEM218A2RU14 115 aa16.81■□□□□ 0.28
LIMD2-208ENST00000579814 RAB5AP20339 215 aa16.81■□□□□ 0.28
LIMD2-208ENST00000579814 DPH3Q96FX2 82 aa16.81■□□□□ 0.28
LIMD2-208ENST00000579814 RNASE13Q5GAN3 156 aaKnown RBP16.8■□□□□ 0.28
LIMD2-208ENST00000579814 SRRM2Q9UQ35 2752 aaKnown RBP16.8■□□□□ 0.28
LIMD2-208ENST00000579814 LAMTOR2Q9Y2Q5 125 aa16.79■□□□□ 0.28
LIMD2-208ENST00000579814 TRAV13-1A0A0B4J241 112 aa16.78■□□□□ 0.28
LIMD2-208ENST00000579814 PANO1I0J062 215 aa16.78■□□□□ 0.28
LIMD2-208ENST00000579814 RPL39P62891 51 aaKnown RBP16.78■□□□□ 0.28
LIMD2-208ENST00000579814 Q6ZUT4 128 aa16.78■□□□□ 0.28
LIMD2-208ENST00000579814 IMMP2LQ96T52 175 aa16.78■□□□□ 0.28
LIMD2-208ENST00000579814 SPANXA1Q9NS26 97 aa16.77■□□□□ 0.28
LIMD2-208ENST00000579814 ADCYAP1P18509 176 aa16.76■□□□□ 0.27
LIMD2-208ENST00000579814 MALP21145 153 aa16.76■□□□□ 0.27
LIMD2-208ENST00000579814 CTDSP1Q9GZU7 261 aa16.76■□□□□ 0.27
LIMD2-208ENST00000579814 PRSS47A8MTI9 375 aa16.75■□□□□ 0.27
LIMD2-208ENST00000579814 ZNF561-AS1K7EIQ3 104 aa16.75■□□□□ 0.27
LIMD2-208ENST00000579814 CIRBPQ14011 172 aaKnown RBP16.75■□□□□ 0.27
LIMD2-208ENST00000579814 MAP1LC3AQ9H492 121 aa16.75■□□□□ 0.27
LIMD2-208ENST00000579814 LOC389332A0A1B0GUA5 103 aa16.74■□□□□ 0.27
LIMD2-208ENST00000579814 COX7A2LO14548 114 aa16.74■□□□□ 0.27
LIMD2-208ENST00000579814 COX6A2Q02221 97 aa16.74■□□□□ 0.27
LIMD2-208ENST00000579814 SEC11CQ9BY50 192 aa16.74■□□□□ 0.27
LIMD2-208ENST00000579814 MRPS36P82909 103 aaKnown RBP16.73■□□□□ 0.27
LIMD2-208ENST00000579814 CHTF8P0CG12 524 aa16.72■□□□□ 0.27
LIMD2-208ENST00000579814 COMMD7Q86VX2 200 aa16.72■□□□□ 0.27
LIMD2-208ENST00000579814 LINC00526Q96FQ7 95 aa16.72■□□□□ 0.27
LIMD2-208ENST00000579814 FLG2Q5D862 2391 aaPredicted RBP16.72■□□□□ 0.27
LIMD2-208ENST00000579814 IFI27P40305 119 aaPredicted RBP16.7■□□□□ 0.26
LIMD2-208ENST00000579814 RPL37AP61513 92 aaKnown RBP16.7■□□□□ 0.26
LIMD2-208ENST00000579814 PRSS3P2Q8NHM4 247 aa16.7■□□□□ 0.26
LIMD2-208ENST00000579814 SPACA4Q8TDM5 124 aa16.7■□□□□ 0.26
LIMD2-208ENST00000579814 OPRPNQ99935 248 aaPredicted RBP16.7■□□□□ 0.26
LIMD2-208ENST00000579814 PKIGQ9Y2B9 76 aa16.7■□□□□ 0.26
LIMD2-208ENST00000579814 A0A087WYN8 130 aa16.69■□□□□ 0.26
LIMD2-208ENST00000579814 C5orf38Q86SI9 138 aa16.69■□□□□ 0.26
LIMD2-208ENST00000579814 Q8N8P6 123 aa16.69■□□□□ 0.26
LIMD2-208ENST00000579814 FAM104AQ969W3 186 aa16.69■□□□□ 0.26
LIMD2-208ENST00000579814 CARD19Q96LW7 228 aa16.69■□□□□ 0.26
LIMD2-208ENST00000579814 TRAV9-1A0A075B6T8 112 aa16.68■□□□□ 0.26
LIMD2-208ENST00000579814 APOMO95445 188 aa16.68■□□□□ 0.26
LIMD2-208ENST00000579814 SYCNQ0VAF6 134 aa16.68■□□□□ 0.26
LIMD2-208ENST00000579814 KRTAP10-4P60372 401 aaPredicted RBP16.67■□□□□ 0.26
LIMD2-208ENST00000579814 PYGO1Q9Y3Y4 419 aa16.67■□□□□ 0.26
LIMD2-208ENST00000579814 IFITM10A6NMD0 228 aa16.66■□□□□ 0.26
LIMD2-208ENST00000579814 S100PP25815 95 aa16.66■□□□□ 0.26
LIMD2-208ENST00000579814 IGKV2-24A0A0C4DH68 120 aa16.65■□□□□ 0.26
LIMD2-208ENST00000579814 MAJINQ3KP22 176 aa16.65■□□□□ 0.26
LIMD2-208ENST00000579814 IGLV4-69A0A075B6H9 119 aa16.64■□□□□ 0.25
LIMD2-208ENST00000579814 PLAC8Q9NZF1 115 aa16.64■□□□□ 0.25
LIMD2-208ENST00000579814 K7EMI3 77 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms