RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 LPAP08519 4548 aa12.9□□□□□ -0.34
TSEN54-205ENST00000578415 TEX46H3BTG2 121 aa12.9□□□□□ -0.34
TSEN54-205ENST00000578415 I3L3M4 83 aa12.9□□□□□ -0.34
TSEN54-205ENST00000578415 TMEM101Q96IK0 257 aa12.9□□□□□ -0.34
TSEN54-205ENST00000578415 TRBV6-5A0A0K0K1A5 114 aa12.89□□□□□ -0.35
TSEN54-205ENST00000578415 A0A1W2PNN7 141 aa12.89□□□□□ -0.35
TSEN54-205ENST00000578415 ZNF561-AS1K7EIQ3 104 aa12.89□□□□□ -0.35
TSEN54-205ENST00000578415 TSHBP01222 138 aa12.89□□□□□ -0.35
TSEN54-205ENST00000578415 PMCHP20382 165 aa12.89□□□□□ -0.35
TSEN54-205ENST00000578415 CD164L2Q6UWJ8 174 aa12.89□□□□□ -0.35
TSEN54-205ENST00000578415 SMIM15Q7Z3B0 74 aa12.89□□□□□ -0.35
TSEN54-205ENST00000578415 CAMPP49913 170 aa12.88□□□□□ -0.35
TSEN54-205ENST00000578415 GAGE2BQ13066 116 aa12.88□□□□□ -0.35
TSEN54-205ENST00000578415 OCC1Q8TAD7 63 aa12.88□□□□□ -0.35
TSEN54-205ENST00000578415 CDC42SE2Q9NRR3 84 aa12.88□□□□□ -0.35
TSEN54-205ENST00000578415 TMEM242Q9NWH2 141 aa12.88□□□□□ -0.35
TSEN54-205ENST00000578415 SS18Q15532 418 aa12.87□□□□□ -0.35
TSEN54-205ENST00000578415 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
TSEN54-205ENST00000578415 MRPL52Q86TS9 123 aaKnown RBP12.86□□□□□ -0.35
TSEN54-205ENST00000578415 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
TSEN54-205ENST00000578415 IGLV4-69A0A075B6H9 119 aa12.85□□□□□ -0.35
TSEN54-205ENST00000578415 PSORS1C2Q9UIG4 136 aa12.85□□□□□ -0.35
TSEN54-205ENST00000578415 ZNF664Q8N3J9 261 aa12.84□□□□□ -0.35
TSEN54-205ENST00000578415 NUP35Q8NFH5 326 aa12.83□□□□□ -0.36
TSEN54-205ENST00000578415 ISOC2Q96AB3 205 aa12.83□□□□□ -0.36
TSEN54-205ENST00000578415 ST20Q9HBF5 79 aa12.83□□□□□ -0.36
TSEN54-205ENST00000578415 POLR2KP53803 58 aaKnown RBP12.82□□□□□ -0.36
TSEN54-205ENST00000578415 IFITM2Q01629 132 aa12.82□□□□□ -0.36
TSEN54-205ENST00000578415 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
TSEN54-205ENST00000578415 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.81□□□□□ -0.36
TSEN54-205ENST00000578415 APOMO95445 188 aa12.81□□□□□ -0.36
TSEN54-205ENST00000578415 BLOC1S1P78537 153 aa12.81□□□□□ -0.36
TSEN54-205ENST00000578415 FAM210AQ96ND0 272 aa12.81□□□□□ -0.36
TSEN54-205ENST00000578415 C7orf77A4D0Y5 90 aa12.8□□□□□ -0.36
TSEN54-205ENST00000578415 GATCO43716 136 aaKnown RBP12.8□□□□□ -0.36
TSEN54-205ENST00000578415 MT-ND6P03923 174 aa12.8□□□□□ -0.36
TSEN54-205ENST00000578415 MALP21145 153 aa12.8□□□□□ -0.36
TSEN54-205ENST00000578415 TAGLN2P37802 199 aaKnown RBP12.8□□□□□ -0.36
TSEN54-205ENST00000578415 TRBV27A0A0K0K1C4 114 aa12.79□□□□□ -0.36
TSEN54-205ENST00000578415 COX7A2LO14548 114 aa12.79□□□□□ -0.36
TSEN54-205ENST00000578415 CAMK2N2Q96S95 79 aa12.79□□□□□ -0.36
TSEN54-205ENST00000578415 A8MWL6 223 aa12.78□□□□□ -0.36
TSEN54-205ENST00000578415 C1orf196B1AJZ1 125 aa12.78□□□□□ -0.36
TSEN54-205ENST00000578415 C1orf137Q5JT78 98 aa12.78□□□□□ -0.36
TSEN54-205ENST00000578415 FAM231DQ6ZW35 169 aa12.78□□□□□ -0.36
TSEN54-205ENST00000578415 PHF5AQ7RTV0 110 aaKnown RBP12.78□□□□□ -0.36
TSEN54-205ENST00000578415 RAB14P61106 215 aa12.77□□□□□ -0.37
TSEN54-205ENST00000578415 C2orf48Q96LS8 159 aa12.77□□□□□ -0.37
TSEN54-205ENST00000578415 RPL18AQ02543 176 aaKnown RBP12.76□□□□□ -0.37
TSEN54-205ENST00000578415 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
TSEN54-205ENST00000578415 CT83Q5H943 113 aa12.76□□□□□ -0.37
TSEN54-205ENST00000578415 PRR26Q8N8Z3 221 aa12.76□□□□□ -0.37
TSEN54-205ENST00000578415 TMEM191AQ9H0A3 160 aa12.76□□□□□ -0.37
TSEN54-205ENST00000578415 RAB4AP20338 218 aa12.75□□□□□ -0.37
TSEN54-205ENST00000578415 OPRPNQ99935 248 aaPredicted RBP12.75□□□□□ -0.37
TSEN54-205ENST00000578415 UBE2D4Q9Y2X8 147 aa12.75□□□□□ -0.37
TSEN54-205ENST00000578415 CSDC2Q9Y534 153 aaKnown RBP12.75□□□□□ -0.37
TSEN54-205ENST00000578415 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
TSEN54-205ENST00000578415 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
TSEN54-205ENST00000578415 TRAV13-1A0A0B4J241 112 aa12.73□□□□□ -0.37
TSEN54-205ENST00000578415 A0A1B0GUT8 65 aa12.73□□□□□ -0.37
TSEN54-205ENST00000578415 BORCS7Q96B45 105 aa12.73□□□□□ -0.37
TSEN54-205ENST00000578415 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
TSEN54-205ENST00000578415 TMEM250H0YL14 139 aa12.72□□□□□ -0.37
TSEN54-205ENST00000578415 SMKR1H3BMG3 65 aa12.72□□□□□ -0.37
TSEN54-205ENST00000578415 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
TSEN54-205ENST00000578415 SPAG11BQ08648 103 aa12.72□□□□□ -0.37
TSEN54-205ENST00000578415 VCYO14598 125 aa12.71□□□□□ -0.37
TSEN54-205ENST00000578415 FCER1GP30273 86 aa12.71□□□□□ -0.37
TSEN54-205ENST00000578415 RNF151Q2KHN1 245 aa12.71□□□□□ -0.37
TSEN54-205ENST00000578415 Q6ZUT4 128 aa12.71□□□□□ -0.37
TSEN54-205ENST00000578415 KRTAP11-1Q8IUC1 163 aa12.71□□□□□ -0.37
TSEN54-205ENST00000578415 DIRC1Q969H9 104 aa12.71□□□□□ -0.37
TSEN54-205ENST00000578415 CLLU1Q5K131 121 aa12.7□□□□□ -0.38
TSEN54-205ENST00000578415 TSKUQ8WUA8 353 aa12.7□□□□□ -0.38
TSEN54-205ENST00000578415 NRACQ8N912 160 aa12.69□□□□□ -0.38
TSEN54-205ENST00000578415 H0Y9J4 135 aa12.68□□□□□ -0.38
TSEN54-205ENST00000578415 SUMO2P61956 95 aaKnown RBP12.68□□□□□ -0.38
TSEN54-205ENST00000578415 A0A087WZ39 114 aa12.67□□□□□ -0.38
TSEN54-205ENST00000578415 FAM168BA1KXE4 195 aa12.67□□□□□ -0.38
TSEN54-205ENST00000578415 SMAGPQ0VAQ4 97 aa12.67□□□□□ -0.38
TSEN54-205ENST00000578415 MRPL35Q9NZE8 188 aaKnown RBP12.67□□□□□ -0.38
TSEN54-205ENST00000578415 MUC2Q02817 5179 aa12.66□□□□□ -0.38
TSEN54-205ENST00000578415 CEBPGP53567 150 aa12.66□□□□□ -0.38
TSEN54-205ENST00000578415 OR10D4PQ8NGN7 298 aa12.66□□□□□ -0.38
TSEN54-205ENST00000578415 KIR2DL4Q99706 377 aa12.66□□□□□ -0.38
TSEN54-205ENST00000578415 TIMM21Q9BVV7 248 aa12.66□□□□□ -0.38
TSEN54-205ENST00000578415 KRTAP1-4P0C5Y4 121 aa12.65□□□□□ -0.38
TSEN54-205ENST00000578415 LINC01551Q86U37 167 aa12.65□□□□□ -0.38
TSEN54-205ENST00000578415 EIF5A2Q9GZV4 153 aaKnown RBP12.65□□□□□ -0.38
TSEN54-205ENST00000578415 C10orf25Q5T742 122 aa12.64□□□□□ -0.39
TSEN54-205ENST00000578415 ORAOV1Q8WV07 137 aa12.64□□□□□ -0.39
TSEN54-205ENST00000578415 FAM104AQ969W3 186 aa12.64□□□□□ -0.39
TSEN54-205ENST00000578415 IGLV1-50A0A075B6I6 118 aa12.63□□□□□ -0.39
TSEN54-205ENST00000578415 PPP1R17O96001 155 aa12.63□□□□□ -0.39
TSEN54-205ENST00000578415 IMMP2LQ96T52 175 aa12.63□□□□□ -0.39
TSEN54-205ENST00000578415 OSTCQ9NRP0 149 aa12.63□□□□□ -0.39
TSEN54-205ENST00000578415 IGHV3OR16-9A0A0B4J2B5 98 aa12.62□□□□□ -0.39
TSEN54-205ENST00000578415 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
TSEN54-205ENST00000578415 RIGQ13278 110 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms