RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 POLR2KP53803 58 aaKnown RBP9.99□□□□□ -0.81
SF3B3-215ENST00000577085 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
SF3B3-215ENST00000577085 SS18Q15532 418 aa9.99□□□□□ -0.81
SF3B3-215ENST00000577085 F8W036 122 aa9.98□□□□□ -0.81
SF3B3-215ENST00000577085 CKS2P33552 79 aa9.98□□□□□ -0.81
SF3B3-215ENST00000577085 RAB14P61106 215 aa9.98□□□□□ -0.81
SF3B3-215ENST00000577085 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
SF3B3-215ENST00000577085 FAM104BQ5XKR9 115 aa9.98□□□□□ -0.81
SF3B3-215ENST00000577085 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
SF3B3-215ENST00000577085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-215ENST00000577085 LINC00862A6NCI5 91 aa9.97□□□□□ -0.81
SF3B3-215ENST00000577085 CCL25O15444 150 aa9.97□□□□□ -0.81
SF3B3-215ENST00000577085 MRPL51Q4U2R6 128 aaKnown RBP9.97□□□□□ -0.81
SF3B3-215ENST00000577085 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
SF3B3-215ENST00000577085 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
SF3B3-215ENST00000577085 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
SF3B3-215ENST00000577085 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.82
SF3B3-215ENST00000577085 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.82
SF3B3-215ENST00000577085 HBBP68871 147 aa9.96□□□□□ -0.82
SF3B3-215ENST00000577085 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.82
SF3B3-215ENST00000577085 NRACQ8N912 160 aa9.96□□□□□ -0.82
SF3B3-215ENST00000577085 TMEM18Q96B42 140 aa9.96□□□□□ -0.82
SF3B3-215ENST00000577085 FOXI1Q12951 378 aa9.95□□□□□ -0.82
SF3B3-215ENST00000577085 C20orf78Q9BR46 151 aa9.95□□□□□ -0.82
SF3B3-215ENST00000577085 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
SF3B3-215ENST00000577085 GVQW2A0A096LPI5 108 aaPredicted RBP9.94□□□□□ -0.82
SF3B3-215ENST00000577085 TCAPO15273 167 aa9.94□□□□□ -0.82
SF3B3-215ENST00000577085 SLPIP03973 132 aa9.94□□□□□ -0.82
SF3B3-215ENST00000577085 IGHV1-58A0A0C4DH39 117 aa9.93□□□□□ -0.82
SF3B3-215ENST00000577085 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
SF3B3-215ENST00000577085 C1orf196B1AJZ1 125 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 D6R8Y8 96 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 PANO1I0J062 215 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 ZNF561-AS1K7EIQ3 104 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 TNFRSF6BO95407 300 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 MALP21145 153 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 COX6A2Q02221 97 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 PKIGQ9Y2B9 76 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
SF3B3-215ENST00000577085 CSDC2Q9Y534 153 aaKnown RBP9.92□□□□□ -0.82
SF3B3-215ENST00000577085 MYCBP2O75592 4640 aa9.91□□□□□ -0.82
SF3B3-215ENST00000577085 TRBV24-1A0A075B6N3 115 aa9.91□□□□□ -0.82
SF3B3-215ENST00000577085 PPBPP02775 128 aa9.91□□□□□ -0.82
SF3B3-215ENST00000577085 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
SF3B3-215ENST00000577085 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
SF3B3-215ENST00000577085 PNRC1Q12796 327 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-215ENST00000577085 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
SF3B3-215ENST00000577085 RNASE13Q5GAN3 156 aaKnown RBP9.9□□□□□ -0.82
SF3B3-215ENST00000577085 ATP5L2Q7Z4Y8 100 aa9.9□□□□□ -0.82
SF3B3-215ENST00000577085 SPACA4Q8TDM5 124 aa9.9□□□□□ -0.82
SF3B3-215ENST00000577085 SMIM2Q9BVW6 85 aa9.9□□□□□ -0.82
SF3B3-215ENST00000577085 FLG2Q5D862 2391 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-215ENST00000577085 A0A087WYN8 130 aa9.89□□□□□ -0.83
SF3B3-215ENST00000577085 TRAV13-1A0A0B4J241 112 aa9.89□□□□□ -0.83
SF3B3-215ENST00000577085 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
SF3B3-215ENST00000577085 KRTAP29-1A8MX34 341 aaPredicted RBP9.89□□□□□ -0.83
SF3B3-215ENST00000577085 COX7A2LO14548 114 aa9.89□□□□□ -0.83
SF3B3-215ENST00000577085 MT-ND4LP03901 98 aa9.89□□□□□ -0.83
SF3B3-215ENST00000577085 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
SF3B3-215ENST00000577085 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
SF3B3-215ENST00000577085 ORMDL3Q8N138 153 aa9.89□□□□□ -0.83
SF3B3-215ENST00000577085 HERC1Q15751 4861 aa9.89□□□□□ -0.83
SF3B3-215ENST00000577085 PHOX2AO14813 284 aa9.88□□□□□ -0.83
SF3B3-215ENST00000577085 RAB5AP20339 215 aa9.88□□□□□ -0.83
SF3B3-215ENST00000577085 KRTAP10-4P60372 401 aaPredicted RBP9.88□□□□□ -0.83
SF3B3-215ENST00000577085 C7orf33Q8WU49 177 aa9.88□□□□□ -0.83
SF3B3-215ENST00000577085 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
SF3B3-215ENST00000577085 CARD19Q96LW7 228 aa9.88□□□□□ -0.83
SF3B3-215ENST00000577085 TIMM21Q9BVV7 248 aa9.88□□□□□ -0.83
SF3B3-215ENST00000577085 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
SF3B3-215ENST00000577085 NPYP01303 97 aa9.87□□□□□ -0.83
SF3B3-215ENST00000577085 Q6ZUT4 128 aa9.87□□□□□ -0.83
SF3B3-215ENST00000577085 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
SF3B3-215ENST00000577085 LINC00526Q96FQ7 95 aa9.87□□□□□ -0.83
SF3B3-215ENST00000577085 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
SF3B3-215ENST00000577085 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
SF3B3-215ENST00000577085 TMEM136Q6ZRR5 245 aa9.86□□□□□ -0.83
SF3B3-215ENST00000577085 PRELID3AQ96N28 172 aa9.86□□□□□ -0.83
SF3B3-215ENST00000577085 SPANXA1Q9NS26 97 aa9.86□□□□□ -0.83
SF3B3-215ENST00000577085 APOMO95445 188 aa9.85□□□□□ -0.83
SF3B3-215ENST00000577085 OXTP01178 125 aa9.85□□□□□ -0.83
SF3B3-215ENST00000577085 RPL39P62891 51 aaKnown RBP9.85□□□□□ -0.83
SF3B3-215ENST00000577085 STPG4Q8N801 248 aa9.85□□□□□ -0.83
SF3B3-215ENST00000577085 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
SF3B3-215ENST00000577085 PLAC8Q9NZF1 115 aa9.84□□□□□ -0.83
SF3B3-215ENST00000577085 IGLV4-69A0A075B6H9 119 aa9.83□□□□□ -0.84
SF3B3-215ENST00000577085 A0A096LNI7 61 aa9.83□□□□□ -0.84
SF3B3-215ENST00000577085 IFI27P40305 119 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-215ENST00000577085 CAMK2N2Q96S95 79 aa9.83□□□□□ -0.84
SF3B3-215ENST00000577085 MAP1LC3AQ9H492 121 aa9.83□□□□□ -0.84
SF3B3-215ENST00000577085 LOC389332A0A1B0GUA5 103 aa9.82□□□□□ -0.84
SF3B3-215ENST00000577085 IFITM10A6NMD0 228 aa9.82□□□□□ -0.84
SF3B3-215ENST00000577085 CLLU1Q5K131 121 aa9.82□□□□□ -0.84
SF3B3-215ENST00000577085 LAMTOR2Q9Y2Q5 125 aa9.82□□□□□ -0.84
SF3B3-215ENST00000577085 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
SF3B3-215ENST00000577085 SPAG11BQ08648 103 aa9.8□□□□□ -0.84
SF3B3-215ENST00000577085 OPRPNQ99935 248 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-215ENST00000577085 LOC107984640A0A0U1RRK4 108 aa9.79□□□□□ -0.84
SF3B3-215ENST00000577085 HNRNPA3P51991 378 aaKnown RBP9.79□□□□□ -0.84
SF3B3-215ENST00000577085 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms