RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 V9GYV3 84 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 IGKV3OR2-268A0A0C4DH90 116 aa6.25□□□□□ -1.41
NPLOC4-220ENST00000576940 S100PP25815 95 aa6.25□□□□□ -1.41
NPLOC4-220ENST00000576940 SMIM27A0A1W2PRY6 76 aa6.24□□□□□ -1.41
NPLOC4-220ENST00000576940 H7C1H1 209 aa6.24□□□□□ -1.41
NPLOC4-220ENST00000576940 M0QY20 66 aa6.24□□□□□ -1.41
NPLOC4-220ENST00000576940 SNAI2O43623 268 aa6.24□□□□□ -1.41
NPLOC4-220ENST00000576940 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
NPLOC4-220ENST00000576940 FOXA3P55318 350 aaPredicted RBP6.24□□□□□ -1.41
NPLOC4-220ENST00000576940 CFAP161Q6P656 301 aa6.24□□□□□ -1.41
NPLOC4-220ENST00000576940 CXCL1P09341 107 aa6.23□□□□□ -1.41
NPLOC4-220ENST00000576940 OR5AL1P0C617 328 aa6.23□□□□□ -1.41
NPLOC4-220ENST00000576940 Q6ZRP5 223 aa6.23□□□□□ -1.41
NPLOC4-220ENST00000576940 ATP5L2Q7Z4Y8 100 aa6.23□□□□□ -1.41
NPLOC4-220ENST00000576940 TMEM243Q9BU79 118 aa6.23□□□□□ -1.41
NPLOC4-220ENST00000576940 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
NPLOC4-220ENST00000576940 MT-ND6P03923 174 aa6.22□□□□□ -1.41
NPLOC4-220ENST00000576940 MGPP08493 103 aa6.22□□□□□ -1.41
NPLOC4-220ENST00000576940 SUMO4Q6EEV6 95 aa6.22□□□□□ -1.41
NPLOC4-220ENST00000576940 TSKUQ8WUA8 353 aa6.22□□□□□ -1.41
NPLOC4-220ENST00000576940 LINC00526Q96FQ7 95 aa6.22□□□□□ -1.41
NPLOC4-220ENST00000576940 A8MWL6 223 aa6.21□□□□□ -1.42
NPLOC4-220ENST00000576940 UBE2L6O14933 153 aa6.21□□□□□ -1.42
NPLOC4-220ENST00000576940 RAB5BP61020 215 aa6.21□□□□□ -1.42
NPLOC4-220ENST00000576940 GATD1Q8NB37 220 aa6.21□□□□□ -1.42
NPLOC4-220ENST00000576940 NUDT10Q8NFP7 164 aa6.21□□□□□ -1.42
NPLOC4-220ENST00000576940 CHCHD10Q8WYQ3 142 aaPredicted RBP6.21□□□□□ -1.42
NPLOC4-220ENST00000576940 NUDT11Q96G61 164 aa6.21□□□□□ -1.42
NPLOC4-220ENST00000576940 RPP21Q9H633 154 aaKnown RBP6.21□□□□□ -1.42
NPLOC4-220ENST00000576940 GVQW2A0A096LPI5 108 aaPredicted RBP6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 A0A1B0GW15 77 aa6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 C1orf196B1AJZ1 125 aa6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 GATCO43716 136 aaKnown RBP6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 COA6Q5JTJ3 125 aaKnown RBP6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 GNB1LQ9BYB4 327 aa6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 CNFNQ9BYD5 112 aa6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 NAT8BQ9UHF3 227 aa6.2□□□□□ -1.42
NPLOC4-220ENST00000576940 TGIF2-C20orf24A0A0A6YYL0 155 aa6.19□□□□□ -1.42
NPLOC4-220ENST00000576940 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
NPLOC4-220ENST00000576940 A0A1B0GXF2 115 aa6.19□□□□□ -1.42
NPLOC4-220ENST00000576940 RPS20P60866 119 aaKnown RBP6.19□□□□□ -1.42
NPLOC4-220ENST00000576940 RNASE7Q9H1E1 156 aaKnown RBP6.19□□□□□ -1.42
NPLOC4-220ENST00000576940 LINC00474Q9P2X8 69 aa6.19□□□□□ -1.42
NPLOC4-220ENST00000576940 XKRY2A2RUG3 117 aa6.18□□□□□ -1.42
NPLOC4-220ENST00000576940 AMTP48728 403 aa6.18□□□□□ -1.42
NPLOC4-220ENST00000576940 FOXI1Q12951 378 aa6.18□□□□□ -1.42
NPLOC4-220ENST00000576940 PRR26Q8N8Z3 221 aa6.18□□□□□ -1.42
NPLOC4-220ENST00000576940 PGLYRP4Q96LB8 373 aa6.18□□□□□ -1.42
NPLOC4-220ENST00000576940 TPPP3Q9BW30 176 aa6.18□□□□□ -1.42
NPLOC4-220ENST00000576940 NIT2Q9NQR4 276 aa6.18□□□□□ -1.42
NPLOC4-220ENST00000576940 A0A1W2PNN7 141 aa6.17□□□□□ -1.42
NPLOC4-220ENST00000576940 S100A8P05109 93 aa6.17□□□□□ -1.42
NPLOC4-220ENST00000576940 CTRLP40313 264 aa6.17□□□□□ -1.42
NPLOC4-220ENST00000576940 COTL1Q14019 142 aa6.17□□□□□ -1.42
NPLOC4-220ENST00000576940 ZNF664Q8N3J9 261 aa6.17□□□□□ -1.42
NPLOC4-220ENST00000576940 PSORS1C2Q9UIG4 136 aa6.17□□□□□ -1.42
NPLOC4-220ENST00000576940 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIGD1CA8MV81 97 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BKO60814 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BJP06899 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 IGLC6P0CF74 106 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BOP23527 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BBP33778 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BDP58876 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BCP62807 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 GAGE2BQ13066 116 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST2H2BEQ16778 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 RNASEKQ6P5S7 137 aaKnown RBP6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BHQ93079 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 CARD19Q96LW7 228 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BNQ99877 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 HIST1H2BMQ99879 126 aa6.16□□□□□ -1.42
NPLOC4-220ENST00000576940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 LOC105371267A0A1B0GV96 52 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 F2Z2F3 143 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 TRGC2P03986 189 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 XCL1P47992 114 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 C1orf137Q5JT78 98 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 AMMECR1LQ6DCA0 310 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 TMEM136Q6ZRR5 245 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 FER1L6-AS1Q8NA97 138 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 OR2D3Q8NGH3 330 aa6.15□□□□□ -1.42
NPLOC4-220ENST00000576940 TRAV26-2A0A0B4J265 109 aa6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 A0A1B0GUT8 65 aa6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 NTF3P20783 257 aa6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 PTTG1IPP53801 180 aa6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 CACNG7P62955 275 aa6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 HBBP68871 147 aa6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 SYCNQ0VAF6 134 aa6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 PRR4Q16378 134 aa6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 TMA7Q9Y2S6 64 aaKnown RBP6.14□□□□□ -1.43
NPLOC4-220ENST00000576940 IGHV1-58A0A0C4DH39 117 aa6.13□□□□□ -1.43
NPLOC4-220ENST00000576940 CCL25O15444 150 aa6.13□□□□□ -1.43
NPLOC4-220ENST00000576940 TRGC1P0CF51 173 aa6.13□□□□□ -1.43
NPLOC4-220ENST00000576940 FGF6P10767 208 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms