RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TMEM18Q96B42 140 aa15.33■□□□□ 0.04
SNF8-217ENST00000576353 SMIM2Q9BVW6 85 aa15.33■□□□□ 0.04
SNF8-217ENST00000576353 GAGE12HA6NDE8 117 aa15.32■□□□□ 0.04
SNF8-217ENST00000576353 NPYP01303 97 aa15.32■□□□□ 0.04
SNF8-217ENST00000576353 CHCHD10Q8WYQ3 142 aaPredicted RBP15.32■□□□□ 0.04
SNF8-217ENST00000576353 KRTAP17-1Q9BYP8 105 aa15.32■□□□□ 0.04
SNF8-217ENST00000576353 CDC42SE2Q9NRR3 84 aa15.32■□□□□ 0.04
SNF8-217ENST00000576353 LINC01620Q4KN68 170 aa15.31■□□□□ 0.04
SNF8-217ENST00000576353 PRELID3AQ96N28 172 aa15.31■□□□□ 0.04
SNF8-217ENST00000576353 FAM30AQ9NZY2 134 aa15.31■□□□□ 0.04
SNF8-217ENST00000576353 CSDC2Q9Y534 153 aaKnown RBP15.31■□□□□ 0.04
SNF8-217ENST00000576353 HSPG2P98160 4391 aa15.31■□□□□ 0.04
SNF8-217ENST00000576353 CFAP161Q6P656 301 aa15.3■□□□□ 0.04
SNF8-217ENST00000576353 ZNF664Q8N3J9 261 aa15.3■□□□□ 0.04
SNF8-217ENST00000576353 KRTAP4-5Q9BYR2 181 aa15.3■□□□□ 0.04
SNF8-217ENST00000576353 APOBP04114 4563 aaKnown RBP15.3■□□□□ 0.04
SNF8-217ENST00000576353 Q6ZSA8 131 aa15.29■□□□□ 0.04
SNF8-217ENST00000576353 LAMTOR2Q9Y2Q5 125 aa15.29■□□□□ 0.04
SNF8-217ENST00000576353 LINC00959A0A1B0GUT2 108 aa15.28■□□□□ 0.04
SNF8-217ENST00000576353 UBE2D4Q9Y2X8 147 aa15.28■□□□□ 0.04
SNF8-217ENST00000576353 hDV102S1A0JD36 115 aa15.27■□□□□ 0.04
SNF8-217ENST00000576353 SS18Q15532 418 aa15.27■□□□□ 0.04
SNF8-217ENST00000576353 TIMM21Q9BVV7 248 aa15.27■□□□□ 0.04
SNF8-217ENST00000576353 TRAV9-1A0A075B6T8 112 aa15.26■□□□□ 0.03
SNF8-217ENST00000576353 RAB5AP20339 215 aa15.26■□□□□ 0.03
SNF8-217ENST00000576353 C10orf91Q5T1B1 145 aa15.26■□□□□ 0.03
SNF8-217ENST00000576353 AP5S1Q9NUS5 200 aa15.26■□□□□ 0.03
SNF8-217ENST00000576353 EPM2AB3EWF7 344 aa15.25■□□□□ 0.03
SNF8-217ENST00000576353 S100PP25815 95 aa15.25■□□□□ 0.03
SNF8-217ENST00000576353 HAMPP81172 84 aa15.25■□□□□ 0.03
SNF8-217ENST00000576353 PRSS47A8MTI9 375 aa15.24■□□□□ 0.03
SNF8-217ENST00000576353 CCL25O15444 150 aa15.24■□□□□ 0.03
SNF8-217ENST00000576353 XCL1P47992 114 aa15.24■□□□□ 0.03
SNF8-217ENST00000576353 C9orf163Q8N9P6 203 aa15.24■□□□□ 0.03
SNF8-217ENST00000576353 CARHSP1Q9Y2V2 147 aaKnown RBP15.24■□□□□ 0.03
SNF8-217ENST00000576353 CNBPP62633 177 aaKnown RBP15.23■□□□□ 0.03
SNF8-217ENST00000576353 FOXI1Q12951 378 aa15.23■□□□□ 0.03
SNF8-217ENST00000576353 MAP1LC3AQ9H492 121 aa15.23■□□□□ 0.03
SNF8-217ENST00000576353 SMR3BP02814 79 aaPredicted RBP15.22■□□□□ 0.03
SNF8-217ENST00000576353 C15orf56Q8N910 161 aa15.22■□□□□ 0.03
SNF8-217ENST00000576353 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.21■□□□□ 0.03
SNF8-217ENST00000576353 C1orf196B1AJZ1 125 aa15.21■□□□□ 0.03
SNF8-217ENST00000576353 RPL39P62891 51 aaKnown RBP15.21■□□□□ 0.03
SNF8-217ENST00000576353 RHEBQ15382 184 aa15.21■□□□□ 0.03
SNF8-217ENST00000576353 CD164L2Q6UWJ8 174 aa15.21■□□□□ 0.03
SNF8-217ENST00000576353 SPANXA1Q9NS26 97 aa15.21■□□□□ 0.03
SNF8-217ENST00000576353 LOC389332A0A1B0GUA5 103 aa15.2■□□□□ 0.02
SNF8-217ENST00000576353 FAM229AH3BQW9 127 aa15.19■□□□□ 0.02
SNF8-217ENST00000576353 CHAC1Q9BUX1 264 aa15.19■□□□□ 0.02
SNF8-217ENST00000576353 RNASE13Q5GAN3 156 aaKnown RBP15.18■□□□□ 0.02
SNF8-217ENST00000576353 Q5VSD8 79 aa15.18■□□□□ 0.02
SNF8-217ENST00000576353 Q6ZUT4 128 aa15.18■□□□□ 0.02
SNF8-217ENST00000576353 Q8N8P6 123 aa15.18■□□□□ 0.02
SNF8-217ENST00000576353 RPS10P5Q9NQ39 176 aa15.18■□□□□ 0.02
SNF8-217ENST00000576353 PCLOQ9Y6V0 5065 aa15.17■□□□□ 0.02
SNF8-217ENST00000576353 TRAV13-1A0A0B4J241 112 aa15.17■□□□□ 0.02
SNF8-217ENST00000576353 GVQW2A0A096LPI5 108 aaPredicted RBP15.16■□□□□ 0.02
SNF8-217ENST00000576353 IGHV1-58A0A0C4DH39 117 aa15.16■□□□□ 0.02
SNF8-217ENST00000576353 SLPIP03973 132 aa15.16■□□□□ 0.02
SNF8-217ENST00000576353 MRPS36P82909 103 aaKnown RBP15.16■□□□□ 0.02
SNF8-217ENST00000576353 HIGD2BQ4VC39 106 aa15.16■□□□□ 0.02
SNF8-217ENST00000576353 SCXQ7RTU7 201 aa15.16■□□□□ 0.02
SNF8-217ENST00000576353 GNB1LQ9BYB4 327 aa15.16■□□□□ 0.02
SNF8-217ENST00000576353 COX19Q49B96 90 aa15.15■□□□□ 0.02
SNF8-217ENST00000576353 SDIM1Q6ZPB5 146 aa15.15■□□□□ 0.02
SNF8-217ENST00000576353 IGHV3-64A0A075B6Q5 118 aa15.14■□□□□ 0.01
SNF8-217ENST00000576353 K7EMI3 77 aa15.14■□□□□ 0.01
SNF8-217ENST00000576353 IFI27P40305 119 aaPredicted RBP15.14■□□□□ 0.01
SNF8-217ENST00000576353 NXT2Q9NPJ8 142 aaKnown RBP15.14■□□□□ 0.01
SNF8-217ENST00000576353 NDUFA5Q16718 116 aa15.13■□□□□ 0.01
SNF8-217ENST00000576353 ORMDL2Q53FV1 153 aa15.13■□□□□ 0.01
SNF8-217ENST00000576353 CIRBP-AS1Q8TBR5 109 aa15.13■□□□□ 0.01
SNF8-217ENST00000576353 PYGO1Q9Y3Y4 419 aa15.13■□□□□ 0.01
SNF8-217ENST00000576353 COX7A2LO14548 114 aa15.12■□□□□ 0.01
SNF8-217ENST00000576353 APOC3P02656 99 aa15.12■□□□□ 0.01
SNF8-217ENST00000576353 MALP21145 153 aa15.12■□□□□ 0.01
SNF8-217ENST00000576353 KIAA1644Q3SXP7 199 aa15.12■□□□□ 0.01
SNF8-217ENST00000576353 FAM104AQ969W3 186 aa15.12■□□□□ 0.01
SNF8-217ENST00000576353 ABCA13Q86UQ4 5058 aa15.12■□□□□ 0.01
SNF8-217ENST00000576353 OPRPNQ99935 248 aaPredicted RBP15.11■□□□□ 0.01
SNF8-217ENST00000576353 MT-ND6P03923 174 aa15.1■□□□□ 0.01
SNF8-217ENST00000576353 CYSLTR1Q9Y271 337 aa15.1■□□□□ 0.01
SNF8-217ENST00000576353 SNAPINO95295 136 aa15.09■□□□□ 0.01
SNF8-217ENST00000576353 C2orf66Q6UXQ4 117 aa15.09■□□□□ 0.01
SNF8-217ENST00000576353 SVBPQ8N300 66 aa15.09■□□□□ 0.01
SNF8-217ENST00000576353 IFITM10A6NMD0 228 aa15.08■□□□□ 0
SNF8-217ENST00000576353 ZNF561-AS1K7EIQ3 104 aa15.08■□□□□ 0
SNF8-217ENST00000576353 G0S2P27469 103 aa15.08■□□□□ 0
SNF8-217ENST00000576353 LINC00528Q8N1L1 170 aa15.08■□□□□ 0
SNF8-217ENST00000576353 TMEM141Q96I45 108 aa15.07■□□□□ 0
SNF8-217ENST00000576353 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.07■□□□□ 0
SNF8-217ENST00000576353 IGLV4-3A0A075B6K6 122 aa15.06■□□□□ 0
SNF8-217ENST00000576353 APOMO95445 188 aa15.06■□□□□ 0
SNF8-217ENST00000576353 PLA2G1BP04054 148 aaKnown RBP15.06■□□□□ 0
SNF8-217ENST00000576353 INAFM2P0DMQ5 153 aa15.06■□□□□ 0
SNF8-217ENST00000576353 C5orf38Q86SI9 138 aa15.06■□□□□ 0
SNF8-217ENST00000576353 PRSS3P2Q8NHM4 247 aa15.05■□□□□ -0
SNF8-217ENST00000576353 ALKBH7Q9BT30 221 aaPredicted RBP15.05■□□□□ -0
SNF8-217ENST00000576353 MRPL18Q9H0U6 180 aaKnown RBP15.05■□□□□ -0
SNF8-217ENST00000576353 NPSP0C0P6 89 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms