RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 SNRPD3P62318 126 aaKnown RBP10.62□□□□□ -0.71
SCARF1-209ENST00000576012 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
SCARF1-209ENST00000576012 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
SCARF1-209ENST00000576012 EDA2RQ9HAV5 297 aa10.62□□□□□ -0.71
SCARF1-209ENST00000576012 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
SCARF1-209ENST00000576012 IGSF10Q6WRI0 2623 aa10.62□□□□□ -0.71
SCARF1-209ENST00000576012 NAV2Q8IVL1 2488 aa10.62□□□□□ -0.71
SCARF1-209ENST00000576012 LINC01587Q99440 93 aa10.62□□□□□ -0.71
SCARF1-209ENST00000576012 COX6A2Q02221 97 aa10.61□□□□□ -0.71
SCARF1-209ENST00000576012 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
SCARF1-209ENST00000576012 RBMY1A1P0DJD3 496 aaKnown RBP10.61□□□□□ -0.71
SCARF1-209ENST00000576012 RBMY1CP0DJD4 496 aa10.61□□□□□ -0.71
SCARF1-209ENST00000576012 RBMY1FQ15415 496 aaKnown RBP10.61□□□□□ -0.71
SCARF1-209ENST00000576012 PIK3CD-AS1Q5SR53 167 aa10.61□□□□□ -0.71
SCARF1-209ENST00000576012 A0A0J9YX75 114 aa10.6□□□□□ -0.71
SCARF1-209ENST00000576012 DNAJC30Q96LL9 226 aa10.6□□□□□ -0.71
SCARF1-209ENST00000576012 C19orf84I3L1E1 186 aa10.6□□□□□ -0.71
SCARF1-209ENST00000576012 MRPS36P82909 103 aaKnown RBP10.6□□□□□ -0.71
SCARF1-209ENST00000576012 FAM19A5Q7Z5A7 132 aaPredicted RBP10.6□□□□□ -0.71
SCARF1-209ENST00000576012 ANKRD17O75179 2603 aaKnown RBP10.6□□□□□ -0.71
SCARF1-209ENST00000576012 BAALC-AS2P0C853 105 aa10.6□□□□□ -0.71
SCARF1-209ENST00000576012 NOTCH2Q04721 2471 aa10.59□□□□□ -0.71
SCARF1-209ENST00000576012 IGHV3-53P01767 116 aa10.59□□□□□ -0.71
SCARF1-209ENST00000576012 CFHR3Q02985 330 aa10.59□□□□□ -0.71
SCARF1-209ENST00000576012 MAPK1IP1LQ8NDC0 245 aa10.59□□□□□ -0.71
SCARF1-209ENST00000576012 USMG5Q96IX5 58 aa10.59□□□□□ -0.71
SCARF1-209ENST00000576012 FBN2P35556 2912 aa10.58□□□□□ -0.72
SCARF1-209ENST00000576012 IGKV3D-7A0A0C4DH55 119 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 CIRBPQ14011 172 aaKnown RBP10.57□□□□□ -0.72
SCARF1-209ENST00000576012 PRIMA1Q86XR5 153 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 IGHV4-61A0A0C4DH41 118 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 GNLYP22749 145 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 DEFB136Q30KP8 78 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 SDIM1Q6ZPB5 146 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 KIR2DL5BQ8NHK3 375 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 LINC00308Q8TCZ7 52 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 TMEM126AQ9H061 195 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 MTORP42345 2549 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 DEFB131AP59861 70 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 HERVK_113P63121 156 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 SOSTDC1Q6X4U4 206 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 FAM218AQ96MZ4 157 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 SPANXDQ9BXN6 97 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 SPANXCQ9NY87 97 aa10.57□□□□□ -0.72
SCARF1-209ENST00000576012 MRAPQ8TCY5 172 aa10.56□□□□□ -0.72
SCARF1-209ENST00000576012 TOMM7Q9P0U1 55 aa10.56□□□□□ -0.72
SCARF1-209ENST00000576012 UBE2D4Q9Y2X8 147 aa10.56□□□□□ -0.72
SCARF1-209ENST00000576012 NF1P21359 2839 aa10.56□□□□□ -0.72
SCARF1-209ENST00000576012 OR13C6PQ8NH95 151 aa10.56□□□□□ -0.72
SCARF1-209ENST00000576012 PRORYQ9H606 182 aa10.55□□□□□ -0.72
SCARF1-209ENST00000576012 FN1P02751 2386 aaKnown RBP10.55□□□□□ -0.72
SCARF1-209ENST00000576012 CHCHD7Q9BUK0 85 aa10.55□□□□□ -0.72
SCARF1-209ENST00000576012 J3QLI3 93 aa10.54□□□□□ -0.72
SCARF1-209ENST00000576012 TIRAPP58753 221 aa10.54□□□□□ -0.72
SCARF1-209ENST00000576012 ACANP16112 2415 aa10.54□□□□□ -0.72
SCARF1-209ENST00000576012 hADV29S1A0JD25 119 aa10.54□□□□□ -0.72
SCARF1-209ENST00000576012 TINCRA0A1B0GVN0 87 aa10.53□□□□□ -0.72
SCARF1-209ENST00000576012 ATP5G1P05496 136 aa10.53□□□□□ -0.72
SCARF1-209ENST00000576012 KHDC1LQ5JSQ8 128 aa10.53□□□□□ -0.72
SCARF1-209ENST00000576012 MXRA5Q9NR99 2828 aa10.53□□□□□ -0.72
SCARF1-209ENST00000576012 A0A087WVE0 104 aa10.53□□□□□ -0.72
SCARF1-209ENST00000576012 TEX15Q9BXT5 2789 aa10.53□□□□□ -0.72
SCARF1-209ENST00000576012 TRBV7-7A0A0K0K1E9 115 aa10.53□□□□□ -0.72
SCARF1-209ENST00000576012 KLK9Q2XQG4 91 aa10.52□□□□□ -0.72
SCARF1-209ENST00000576012 C3orf22Q8N5N4 141 aa10.52□□□□□ -0.72
SCARF1-209ENST00000576012 SPANXA1Q9NS26 97 aa10.52□□□□□ -0.72
SCARF1-209ENST00000576012 DOPEY1Q5JWR5 2465 aa10.52□□□□□ -0.73
SCARF1-209ENST00000576012 COX7A2LO14548 114 aa10.52□□□□□ -0.73
SCARF1-209ENST00000576012 FBXL19-AS1Q494R0 122 aa10.52□□□□□ -0.73
SCARF1-209ENST00000576012 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.73
SCARF1-209ENST00000576012 C14orf132Q9NPU4 83 aa10.52□□□□□ -0.73
SCARF1-209ENST00000576012 IGHV4-59P01825 116 aa10.52□□□□□ -0.73
SCARF1-209ENST00000576012 K7EQG2 157 aa10.51□□□□□ -0.73
SCARF1-209ENST00000576012 UBE2E2Q96LR5 201 aa10.51□□□□□ -0.73
SCARF1-209ENST00000576012 CYSTM1Q9H1C7 97 aa10.51□□□□□ -0.73
SCARF1-209ENST00000576012 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
SCARF1-209ENST00000576012 FAM240AA0A1B0GVK7 77 aa10.51□□□□□ -0.73
SCARF1-209ENST00000576012 A0A1W2PRX2 142 aa10.51□□□□□ -0.73
SCARF1-209ENST00000576012 LRRC75A-AS1Q8N1F1 130 aa10.51□□□□□ -0.73
SCARF1-209ENST00000576012 PYGO1Q9Y3Y4 419 aa10.51□□□□□ -0.73
SCARF1-209ENST00000576012 AVPP01185 164 aa10.5□□□□□ -0.73
SCARF1-209ENST00000576012 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.73
SCARF1-209ENST00000576012 SLPIP03973 132 aa10.5□□□□□ -0.73
SCARF1-209ENST00000576012 CHD6Q8TD26 2715 aa10.5□□□□□ -0.73
SCARF1-209ENST00000576012 C18orf65Q6ZTR6 163 aa10.5□□□□□ -0.73
SCARF1-209ENST00000576012 LINC00643Q86TS7 51 aa10.5□□□□□ -0.73
SCARF1-209ENST00000576012 XCL2Q9UBD3 114 aa10.49□□□□□ -0.73
SCARF1-209ENST00000576012 J3KT08 172 aa10.49□□□□□ -0.73
SCARF1-209ENST00000576012 C1orf43Q9BWL3 253 aa10.48□□□□□ -0.73
SCARF1-209ENST00000576012 NDUFA1O15239 70 aa10.48□□□□□ -0.73
SCARF1-209ENST00000576012 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
SCARF1-209ENST00000576012 A6NDX4 124 aa10.48□□□□□ -0.73
SCARF1-209ENST00000576012 IGLV1-40P01703 118 aa10.48□□□□□ -0.73
SCARF1-209ENST00000576012 SLURP1P55000 103 aa10.47□□□□□ -0.73
SCARF1-209ENST00000576012 DNAL4O96015 105 aa10.47□□□□□ -0.73
SCARF1-209ENST00000576012 RNASE1P07998 156 aaKnown RBP10.47□□□□□ -0.73
SCARF1-209ENST00000576012 UQCRQO14949 82 aa10.46□□□□□ -0.73
SCARF1-209ENST00000576012 PFN2P35080 140 aa10.46□□□□□ -0.73
SCARF1-209ENST00000576012 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms