RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 XKRY2A2RUG3 117 aa9.64□□□□□ -0.87
CTDNEP1-211ENST00000575783 SDHAF1A6NFY7 115 aa9.64□□□□□ -0.87
CTDNEP1-211ENST00000575783 LCE2DQ5TA82 110 aaPredicted RBP9.64□□□□□ -0.87
CTDNEP1-211ENST00000575783 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
CTDNEP1-211ENST00000575783 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
CTDNEP1-211ENST00000575783 CDC42SE2Q9NRR3 84 aa9.64□□□□□ -0.87
CTDNEP1-211ENST00000575783 LINC00299Q6ZSB3 139 aa9.63□□□□□ -0.87
CTDNEP1-211ENST00000575783 ALG5Q9Y673 324 aa9.63□□□□□ -0.87
CTDNEP1-211ENST00000575783 C19orf71A6NCJ1 209 aa9.62□□□□□ -0.87
CTDNEP1-211ENST00000575783 I3L3M4 83 aa9.62□□□□□ -0.87
CTDNEP1-211ENST00000575783 UBE2BP63146 152 aa9.62□□□□□ -0.87
CTDNEP1-211ENST00000575783 CENPWQ5EE01 88 aa9.62□□□□□ -0.87
CTDNEP1-211ENST00000575783 C1orf196B1AJZ1 125 aa9.61□□□□□ -0.87
CTDNEP1-211ENST00000575783 ESDP10768 282 aa9.61□□□□□ -0.87
CTDNEP1-211ENST00000575783 C5orf38Q86SI9 138 aa9.61□□□□□ -0.87
CTDNEP1-211ENST00000575783 C9orf62Q8N4C0 152 aa9.61□□□□□ -0.87
CTDNEP1-211ENST00000575783 KCNRGQ8N5I3 272 aa9.61□□□□□ -0.87
CTDNEP1-211ENST00000575783 MRAP2Q96G30 205 aa9.61□□□□□ -0.87
CTDNEP1-211ENST00000575783 CDIP1Q9H305 208 aa9.61□□□□□ -0.87
CTDNEP1-211ENST00000575783 NDUFA13Q9P0J0 144 aa9.61□□□□□ -0.87
CTDNEP1-211ENST00000575783 FOXA3P55318 350 aaPredicted RBP9.6□□□□□ -0.87
CTDNEP1-211ENST00000575783 SPAG11BQ08648 103 aa9.6□□□□□ -0.87
CTDNEP1-211ENST00000575783 RNF151Q2KHN1 245 aa9.6□□□□□ -0.87
CTDNEP1-211ENST00000575783 FAM213BQ8TBF2 198 aa9.6□□□□□ -0.87
CTDNEP1-211ENST00000575783 MBD3L1Q8WWY6 194 aa9.59□□□□□ -0.87
CTDNEP1-211ENST00000575783 IMMP2LQ96T52 175 aa9.59□□□□□ -0.87
CTDNEP1-211ENST00000575783 TMEM242Q9NWH2 141 aa9.59□□□□□ -0.87
CTDNEP1-211ENST00000575783 RAB19A4D1S5 217 aa9.58□□□□□ -0.88
CTDNEP1-211ENST00000575783 TSHBP01222 138 aa9.58□□□□□ -0.88
CTDNEP1-211ENST00000575783 CTRLP40313 264 aa9.58□□□□□ -0.88
CTDNEP1-211ENST00000575783 GAGE2EQ4V326 116 aa9.58□□□□□ -0.88
CTDNEP1-211ENST00000575783 MRPL52Q86TS9 123 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-211ENST00000575783 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
CTDNEP1-211ENST00000575783 CYTL1Q9NRR1 136 aa9.58□□□□□ -0.88
CTDNEP1-211ENST00000575783 GAGE2DQ9UEU5 116 aa9.58□□□□□ -0.88
CTDNEP1-211ENST00000575783 TRAV13-1A0A0B4J241 112 aa9.57□□□□□ -0.88
CTDNEP1-211ENST00000575783 G3V3Q6 166 aa9.57□□□□□ -0.88
CTDNEP1-211ENST00000575783 M0QXV9 152 aa9.57□□□□□ -0.88
CTDNEP1-211ENST00000575783 RNASE13Q5GAN3 156 aaKnown RBP9.57□□□□□ -0.88
CTDNEP1-211ENST00000575783 TEX261Q6UWH6 196 aa9.57□□□□□ -0.88
CTDNEP1-211ENST00000575783 SMIM15Q7Z3B0 74 aa9.57□□□□□ -0.88
CTDNEP1-211ENST00000575783 RPP21Q9H633 154 aaKnown RBP9.57□□□□□ -0.88
CTDNEP1-211ENST00000575783 GNG4P50150 75 aa9.56□□□□□ -0.88
CTDNEP1-211ENST00000575783 KRTAP7-1Q8IUC3 87 aa9.56□□□□□ -0.88
CTDNEP1-211ENST00000575783 MRPL35Q9NZE8 188 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-211ENST00000575783 ZNF861PO60384 105 aa9.55□□□□□ -0.88
CTDNEP1-211ENST00000575783 GIPP09681 153 aaPredicted RBP9.55□□□□□ -0.88
CTDNEP1-211ENST00000575783 TYMSOSQ8TAI1 123 aa9.55□□□□□ -0.88
CTDNEP1-211ENST00000575783 CNFNQ9BYD5 112 aa9.55□□□□□ -0.88
CTDNEP1-211ENST00000575783 RNASE7Q9H1E1 156 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-211ENST00000575783 A0A087X002 238 aa9.54□□□□□ -0.88
CTDNEP1-211ENST00000575783 C10orf25Q5T742 122 aa9.54□□□□□ -0.88
CTDNEP1-211ENST00000575783 NUDT10Q8NFP7 164 aa9.54□□□□□ -0.88
CTDNEP1-211ENST00000575783 C11orf52Q96A22 123 aa9.54□□□□□ -0.88
CTDNEP1-211ENST00000575783 NUDT11Q96G61 164 aa9.54□□□□□ -0.88
CTDNEP1-211ENST00000575783 ST20Q9HBF5 79 aa9.54□□□□□ -0.88
CTDNEP1-211ENST00000575783 TRBV6-5A0A0K0K1A5 114 aa9.53□□□□□ -0.88
CTDNEP1-211ENST00000575783 C7orf77A4D0Y5 90 aa9.53□□□□□ -0.88
CTDNEP1-211ENST00000575783 H2AFB1P0C5Y9 115 aa9.53□□□□□ -0.88
CTDNEP1-211ENST00000575783 OR10D4PQ8NGN7 298 aa9.53□□□□□ -0.88
CTDNEP1-211ENST00000575783 ORAOV1Q8WV07 137 aa9.53□□□□□ -0.88
CTDNEP1-211ENST00000575783 GNG13Q9P2W3 67 aa9.53□□□□□ -0.88
CTDNEP1-211ENST00000575783 NDUFA1O15239 70 aa9.52□□□□□ -0.89
CTDNEP1-211ENST00000575783 ARPC5O15511 151 aa9.52□□□□□ -0.89
CTDNEP1-211ENST00000575783 LINC01547P58512 204 aaPredicted RBP9.52□□□□□ -0.89
CTDNEP1-211ENST00000575783 CCL20P78556 96 aa9.52□□□□□ -0.89
CTDNEP1-211ENST00000575783 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
CTDNEP1-211ENST00000575783 UMAD1C9J7I0 102 aa9.51□□□□□ -0.89
CTDNEP1-211ENST00000575783 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
CTDNEP1-211ENST00000575783 CRYGAP11844 174 aa9.51□□□□□ -0.89
CTDNEP1-211ENST00000575783 TMEM241Q24JQ0 296 aa9.51□□□□□ -0.89
CTDNEP1-211ENST00000575783 SMIM12Q96EX1 92 aa9.51□□□□□ -0.89
CTDNEP1-211ENST00000575783 BIN3Q9NQY0 253 aa9.51□□□□□ -0.89
CTDNEP1-211ENST00000575783 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
CTDNEP1-211ENST00000575783 SMDT1Q9H4I9 107 aa9.5□□□□□ -0.89
CTDNEP1-211ENST00000575783 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
CTDNEP1-211ENST00000575783 TRBV20OR9-2A0A075B6H5 130 aa9.49□□□□□ -0.89
CTDNEP1-211ENST00000575783 IGLV7-46A0A075B6I9 117 aa9.49□□□□□ -0.89
CTDNEP1-211ENST00000575783 F8WDY8 70 aa9.49□□□□□ -0.89
CTDNEP1-211ENST00000575783 FAM210AQ96ND0 272 aa9.49□□□□□ -0.89
CTDNEP1-211ENST00000575783 MANBALQ9NQG1 85 aa9.49□□□□□ -0.89
CTDNEP1-211ENST00000575783 FCER1GP30273 86 aa9.48□□□□□ -0.89
CTDNEP1-211ENST00000575783 POLR2KP53803 58 aaKnown RBP9.48□□□□□ -0.89
CTDNEP1-211ENST00000575783 UBE2D4Q9Y2X8 147 aa9.48□□□□□ -0.89
CTDNEP1-211ENST00000575783 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
CTDNEP1-211ENST00000575783 Q6ZUT4 128 aa9.47□□□□□ -0.89
CTDNEP1-211ENST00000575783 MED9Q9NWA0 146 aa9.47□□□□□ -0.89
CTDNEP1-211ENST00000575783 ANAPC11Q9NYG5 84 aa9.47□□□□□ -0.89
CTDNEP1-211ENST00000575783 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-211ENST00000575783 SMAGPQ0VAQ4 97 aa9.46□□□□□ -0.9
CTDNEP1-211ENST00000575783 CTDSP1Q9GZU7 261 aa9.46□□□□□ -0.9
CTDNEP1-211ENST00000575783 SRSF3P84103 164 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-211ENST00000575783 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-211ENST00000575783 LINC00173Q6ZV60 143 aa9.45□□□□□ -0.9
CTDNEP1-211ENST00000575783 VCYO14598 125 aa9.44□□□□□ -0.9
CTDNEP1-211ENST00000575783 NUPR1O60356 82 aa9.43□□□□□ -0.9
CTDNEP1-211ENST00000575783 IGHV3OR16-9A0A0B4J2B5 98 aa9.42□□□□□ -0.9
CTDNEP1-211ENST00000575783 PDE6DO43924 150 aa9.42□□□□□ -0.9
CTDNEP1-211ENST00000575783 RPL28P46779 137 aaKnown RBP9.42□□□□□ -0.9
CTDNEP1-211ENST00000575783 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms