RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PHF5AQ7RTV0 110 aaKnown RBP7.25□□□□□ -1.25
CTNS-208ENST00000574218 SMIM15Q7Z3B0 74 aa7.25□□□□□ -1.25
CTNS-208ENST00000574218 APOMO95445 188 aa7.24□□□□□ -1.25
CTNS-208ENST00000574218 PMCHP20382 165 aa7.24□□□□□ -1.25
CTNS-208ENST00000574218 RPL13AP40429 203 aaKnown RBP7.24□□□□□ -1.25
CTNS-208ENST00000574218 CENPWQ5EE01 88 aa7.24□□□□□ -1.25
CTNS-208ENST00000574218 GATD1Q8NB37 220 aa7.24□□□□□ -1.25
CTNS-208ENST00000574218 A0A087WZ39 114 aa7.23□□□□□ -1.25
CTNS-208ENST00000574218 TEX261Q6UWH6 196 aa7.23□□□□□ -1.25
CTNS-208ENST00000574218 BIN3Q9NQY0 253 aa7.23□□□□□ -1.25
CTNS-208ENST00000574218 FAT4Q6V0I7 4981 aa7.22□□□□□ -1.25
CTNS-208ENST00000574218 SDHAF1A6NFY7 115 aa7.22□□□□□ -1.25
CTNS-208ENST00000574218 UMAD1C9J7I0 102 aa7.22□□□□□ -1.25
CTNS-208ENST00000574218 I3L3M4 83 aa7.22□□□□□ -1.25
CTNS-208ENST00000574218 COX7A2LO14548 114 aa7.22□□□□□ -1.25
CTNS-208ENST00000574218 NUP35Q8NFH5 326 aa7.22□□□□□ -1.25
CTNS-208ENST00000574218 MBD3L1Q8WWY6 194 aa7.22□□□□□ -1.25
CTNS-208ENST00000574218 RPL39LQ96EH5 51 aaKnown RBP7.22□□□□□ -1.25
CTNS-208ENST00000574218 MRAP2Q96G30 205 aa7.22□□□□□ -1.25
CTNS-208ENST00000574218 C19orf71A6NCJ1 209 aa7.21□□□□□ -1.26
CTNS-208ENST00000574218 ARPC5O15511 151 aa7.21□□□□□ -1.26
CTNS-208ENST00000574218 GNG4P50150 75 aa7.21□□□□□ -1.26
CTNS-208ENST00000574218 SMIM12Q96EX1 92 aa7.21□□□□□ -1.26
CTNS-208ENST00000574218 MRPL18Q9H0U6 180 aaKnown RBP7.21□□□□□ -1.26
CTNS-208ENST00000574218 MANBALQ9NQG1 85 aa7.21□□□□□ -1.26
CTNS-208ENST00000574218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.2□□□□□ -1.26
CTNS-208ENST00000574218 BCL2L11O43521 198 aa7.2□□□□□ -1.26
CTNS-208ENST00000574218 CTRLP40313 264 aa7.2□□□□□ -1.26
CTNS-208ENST00000574218 MEF2BQ02080 365 aaPredicted RBP7.2□□□□□ -1.26
CTNS-208ENST00000574218 C9orf62Q8N4C0 152 aa7.2□□□□□ -1.26
CTNS-208ENST00000574218 C11orf52Q96A22 123 aa7.2□□□□□ -1.26
CTNS-208ENST00000574218 C2orf48Q96LS8 159 aa7.2□□□□□ -1.26
CTNS-208ENST00000574218 CYTL1Q9NRR1 136 aa7.2□□□□□ -1.26
CTNS-208ENST00000574218 C1orf196B1AJZ1 125 aa7.19□□□□□ -1.26
CTNS-208ENST00000574218 SMAGPQ0VAQ4 97 aa7.19□□□□□ -1.26
CTNS-208ENST00000574218 CDC42SE2Q9NRR3 84 aa7.19□□□□□ -1.26
CTNS-208ENST00000574218 GNG13Q9P2W3 67 aa7.19□□□□□ -1.26
CTNS-208ENST00000574218 UBE2BP63146 152 aa7.18□□□□□ -1.26
CTNS-208ENST00000574218 CCL20P78556 96 aa7.18□□□□□ -1.26
CTNS-208ENST00000574218 SPAG11BQ08648 103 aa7.18□□□□□ -1.26
CTNS-208ENST00000574218 FAM210AQ96ND0 272 aa7.18□□□□□ -1.26
CTNS-208ENST00000574218 OPRPNQ99935 248 aaPredicted RBP7.18□□□□□ -1.26
CTNS-208ENST00000574218 TMEM242Q9NWH2 141 aa7.18□□□□□ -1.26
CTNS-208ENST00000574218 C7orf77A4D0Y5 90 aa7.17□□□□□ -1.26
CTNS-208ENST00000574218 RAB19A4D1S5 217 aa7.17□□□□□ -1.26
CTNS-208ENST00000574218 ESDP10768 282 aa7.17□□□□□ -1.26
CTNS-208ENST00000574218 RNF151Q2KHN1 245 aa7.17□□□□□ -1.26
CTNS-208ENST00000574218 MRPL52Q86TS9 123 aaKnown RBP7.17□□□□□ -1.26
CTNS-208ENST00000574218 IMMP2LQ96T52 175 aa7.17□□□□□ -1.26
CTNS-208ENST00000574218 CNFNQ9BYD5 112 aa7.17□□□□□ -1.26
CTNS-208ENST00000574218 ST20Q9HBF5 79 aa7.17□□□□□ -1.26
CTNS-208ENST00000574218 TEX46H3BTG2 121 aa7.16□□□□□ -1.26
CTNS-208ENST00000574218 TSPAN13O95857 204 aa7.16□□□□□ -1.26
CTNS-208ENST00000574218 FAM19A5Q7Z5A7 132 aaPredicted RBP7.16□□□□□ -1.26
CTNS-208ENST00000574218 RPP21Q9H633 154 aaKnown RBP7.16□□□□□ -1.26
CTNS-208ENST00000574218 CARHSP1Q9Y2V2 147 aaKnown RBP7.16□□□□□ -1.26
CTNS-208ENST00000574218 TRBV6-5A0A0K0K1A5 114 aa7.15□□□□□ -1.26
CTNS-208ENST00000574218 G3V3Q6 166 aa7.15□□□□□ -1.26
CTNS-208ENST00000574218 TSHBP01222 138 aa7.15□□□□□ -1.26
CTNS-208ENST00000574218 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.26
CTNS-208ENST00000574218 C5orf38Q86SI9 138 aa7.15□□□□□ -1.26
CTNS-208ENST00000574218 NUDT10Q8NFP7 164 aa7.15□□□□□ -1.26
CTNS-208ENST00000574218 NUDT11Q96G61 164 aa7.15□□□□□ -1.26
CTNS-208ENST00000574218 MED9Q9NWA0 146 aa7.15□□□□□ -1.26
CTNS-208ENST00000574218 TRAV13-1A0A0B4J241 112 aa7.14□□□□□ -1.27
CTNS-208ENST00000574218 KANTRA0A1W2PQU2 76 aa7.14□□□□□ -1.27
CTNS-208ENST00000574218 NDUFA1O15239 70 aa7.14□□□□□ -1.27
CTNS-208ENST00000574218 PDE6DO43924 150 aa7.14□□□□□ -1.27
CTNS-208ENST00000574218 FCER1GP30273 86 aa7.14□□□□□ -1.27
CTNS-208ENST00000574218 OR10D4PQ8NGN7 298 aa7.14□□□□□ -1.27
CTNS-208ENST00000574218 BORCS7Q96B45 105 aa7.14□□□□□ -1.27
CTNS-208ENST00000574218 MRPL35Q9NZE8 188 aaKnown RBP7.14□□□□□ -1.27
CTNS-208ENST00000574218 FAM168BA1KXE4 195 aa7.13□□□□□ -1.27
CTNS-208ENST00000574218 F8WDY8 70 aa7.13□□□□□ -1.27
CTNS-208ENST00000574218 M0QXV9 152 aa7.13□□□□□ -1.27
CTNS-208ENST00000574218 ORAOV1Q8WV07 137 aa7.13□□□□□ -1.27
CTNS-208ENST00000574218 FOXA3P55318 350 aaPredicted RBP7.12□□□□□ -1.27
CTNS-208ENST00000574218 GAGE2EQ4V326 116 aa7.12□□□□□ -1.27
CTNS-208ENST00000574218 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
CTNS-208ENST00000574218 RNASE7Q9H1E1 156 aaKnown RBP7.12□□□□□ -1.27
CTNS-208ENST00000574218 GAGE2DQ9UEU5 116 aa7.12□□□□□ -1.27
CTNS-208ENST00000574218 ZNF345Q14585 488 aa7.11□□□□□ -1.27
CTNS-208ENST00000574218 TMEM241Q24JQ0 296 aa7.11□□□□□ -1.27
CTNS-208ENST00000574218 KRTAP11-1Q8IUC1 163 aa7.11□□□□□ -1.27
CTNS-208ENST00000574218 TRBV20OR9-2A0A075B6H5 130 aa7.1□□□□□ -1.27
CTNS-208ENST00000574218 TRBV27A0A0K0K1C4 114 aa7.1□□□□□ -1.27
CTNS-208ENST00000574218 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
CTNS-208ENST00000574218 CSDC2Q9Y534 153 aaKnown RBP7.1□□□□□ -1.27
CTNS-208ENST00000574218 VCYO14598 125 aa7.09□□□□□ -1.27
CTNS-208ENST00000574218 GATCO43716 136 aaKnown RBP7.09□□□□□ -1.27
CTNS-208ENST00000574218 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
CTNS-208ENST00000574218 POLR2KP53803 58 aaKnown RBP7.09□□□□□ -1.27
CTNS-208ENST00000574218 UBE2D4Q9Y2X8 147 aa7.09□□□□□ -1.27
CTNS-208ENST00000574218 A8MWL6 223 aa7.08□□□□□ -1.28
CTNS-208ENST00000574218 Q6ZUT4 128 aa7.08□□□□□ -1.28
CTNS-208ENST00000574218 KIR2DL4Q99706 377 aa7.08□□□□□ -1.28
CTNS-208ENST00000574218 CDIP1Q9H305 208 aa7.08□□□□□ -1.28
CTNS-208ENST00000574218 SMDT1Q9H4I9 107 aa7.08□□□□□ -1.28
CTNS-208ENST00000574218 SMLR1H3BR10 107 aa7.07□□□□□ -1.28
CTNS-208ENST00000574218 ZNF861PO60384 105 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms