RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 BTF3L4Q96K17 158 aa18.01■□□□□ 0.47
SCARF1-207ENST00000573867 KIR2DL4Q99706 377 aa18.01■□□□□ 0.47
SCARF1-207ENST00000573867 SMIM2Q9BVW6 85 aa18.01■□□□□ 0.47
SCARF1-207ENST00000573867 SMR3BP02814 79 aaPredicted RBP18■□□□□ 0.47
SCARF1-207ENST00000573867 CHCHD10Q8WYQ3 142 aaPredicted RBP18■□□□□ 0.47
SCARF1-207ENST00000573867 TMEM101Q96IK0 257 aa18■□□□□ 0.47
SCARF1-207ENST00000573867 CDC42SE2Q9NRR3 84 aa18■□□□□ 0.47
SCARF1-207ENST00000573867 SEC11CQ9BY50 192 aa17.99■□□□□ 0.47
SCARF1-207ENST00000573867 PPBPP02775 128 aa17.98■□□□□ 0.47
SCARF1-207ENST00000573867 TMEM136Q6ZRR5 245 aa17.98■□□□□ 0.47
SCARF1-207ENST00000573867 ORMDL3Q8N138 153 aa17.98■□□□□ 0.47
SCARF1-207ENST00000573867 UBE2D4Q9Y2X8 147 aa17.98■□□□□ 0.47
SCARF1-207ENST00000573867 VPS13BQ7Z7G8 4022 aa17.97■□□□□ 0.47
SCARF1-207ENST00000573867 PHOX2AO14813 284 aa17.97■□□□□ 0.47
SCARF1-207ENST00000573867 C15orf56Q8N910 161 aa17.97■□□□□ 0.47
SCARF1-207ENST00000573867 LINC00959A0A1B0GUT2 108 aa17.96■□□□□ 0.47
SCARF1-207ENST00000573867 ZNF664Q8N3J9 261 aa17.96■□□□□ 0.47
SCARF1-207ENST00000573867 PRELID3AQ96N28 172 aa17.96■□□□□ 0.47
SCARF1-207ENST00000573867 FOXI1Q12951 378 aa17.95■□□□□ 0.46
SCARF1-207ENST00000573867 CLRN3Q8NCR9 226 aa17.95■□□□□ 0.46
SCARF1-207ENST00000573867 SLPIP03973 132 aa17.94■□□□□ 0.46
SCARF1-207ENST00000573867 DGAT2L7PQ6IED9 249 aa17.94■□□□□ 0.46
SCARF1-207ENST00000573867 IMMP2LQ96T52 175 aa17.94■□□□□ 0.46
SCARF1-207ENST00000573867 hDV102S1A0JD36 115 aa17.93■□□□□ 0.46
SCARF1-207ENST00000573867 EPM2AB3EWF7 344 aa17.93■□□□□ 0.46
SCARF1-207ENST00000573867 TCAPO15273 167 aa17.93■□□□□ 0.46
SCARF1-207ENST00000573867 RPL39P62891 51 aaKnown RBP17.93■□□□□ 0.46
SCARF1-207ENST00000573867 RNASE13Q5GAN3 156 aaKnown RBP17.93■□□□□ 0.46
SCARF1-207ENST00000573867 CTDSP1Q9GZU7 261 aa17.93■□□□□ 0.46
SCARF1-207ENST00000573867 CSDC2Q9Y534 153 aaKnown RBP17.93■□□□□ 0.46
SCARF1-207ENST00000573867 CCL25O15444 150 aa17.92■□□□□ 0.46
SCARF1-207ENST00000573867 XCL1P47992 114 aa17.92■□□□□ 0.46
SCARF1-207ENST00000573867 C10orf91Q5T1B1 145 aa17.92■□□□□ 0.46
SCARF1-207ENST00000573867 Q5VSD8 79 aa17.92■□□□□ 0.46
SCARF1-207ENST00000573867 C9orf163Q8N9P6 203 aa17.92■□□□□ 0.46
SCARF1-207ENST00000573867 Q6ZUT4 128 aa17.91■□□□□ 0.46
SCARF1-207ENST00000573867 SCXQ7RTU7 201 aa17.91■□□□□ 0.46
SCARF1-207ENST00000573867 FAM104AQ969W3 186 aa17.91■□□□□ 0.46
SCARF1-207ENST00000573867 CNBPP62633 177 aaKnown RBP17.9■□□□□ 0.46
SCARF1-207ENST00000573867 TIMM21Q9BVV7 248 aa17.9■□□□□ 0.46
SCARF1-207ENST00000573867 PRSS47A8MTI9 375 aa17.88■□□□□ 0.45
SCARF1-207ENST00000573867 HIGD2BQ4VC39 106 aa17.88■□□□□ 0.45
SCARF1-207ENST00000573867 CARHSP1Q9Y2V2 147 aaKnown RBP17.88■□□□□ 0.45
SCARF1-207ENST00000573867 CHAC1Q9BUX1 264 aa17.87■□□□□ 0.45
SCARF1-207ENST00000573867 LOC389332A0A1B0GUA5 103 aa17.86■□□□□ 0.45
SCARF1-207ENST00000573867 SS18Q15532 418 aa17.86■□□□□ 0.45
SCARF1-207ENST00000573867 TMEM18Q96B42 140 aa17.86■□□□□ 0.45
SCARF1-207ENST00000573867 LAMTOR2Q9Y2Q5 125 aa17.86■□□□□ 0.45
SCARF1-207ENST00000573867 SMAGPQ0VAQ4 97 aa17.85■□□□□ 0.45
SCARF1-207ENST00000573867 OPRPNQ99935 248 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-207ENST00000573867 PANO1I0J062 215 aa17.84■□□□□ 0.45
SCARF1-207ENST00000573867 CFAP161Q6P656 301 aa17.84■□□□□ 0.45
SCARF1-207ENST00000573867 SDIM1Q6ZPB5 146 aa17.84■□□□□ 0.45
SCARF1-207ENST00000573867 CIRBP-AS1Q8TBR5 109 aa17.84■□□□□ 0.45
SCARF1-207ENST00000573867 TRAV9-1A0A075B6T8 112 aa17.83■□□□□ 0.44
SCARF1-207ENST00000573867 GVQW2A0A096LPI5 108 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-207ENST00000573867 CD164L2Q6UWJ8 174 aa17.83■□□□□ 0.44
SCARF1-207ENST00000573867 MAP1LC3AQ9H492 121 aa17.83■□□□□ 0.44
SCARF1-207ENST00000573867 AP5S1Q9NUS5 200 aa17.83■□□□□ 0.44
SCARF1-207ENST00000573867 SRRM2Q9UQ35 2752 aaKnown RBP17.83■□□□□ 0.44
SCARF1-207ENST00000573867 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.82■□□□□ 0.44
SCARF1-207ENST00000573867 TRAV13-1A0A0B4J241 112 aa17.81■□□□□ 0.44
SCARF1-207ENST00000573867 SPANXA1Q9NS26 97 aa17.81■□□□□ 0.44
SCARF1-207ENST00000573867 RAB5AP20339 215 aa17.8■□□□□ 0.44
SCARF1-207ENST00000573867 KIAA1644Q3SXP7 199 aa17.8■□□□□ 0.44
SCARF1-207ENST00000573867 Q8N8P6 123 aa17.8■□□□□ 0.44
SCARF1-207ENST00000573867 C1orf196B1AJZ1 125 aa17.79■□□□□ 0.44
SCARF1-207ENST00000573867 FAM229AH3BQW9 127 aa17.79■□□□□ 0.44
SCARF1-207ENST00000573867 MRPS36P82909 103 aaKnown RBP17.78■□□□□ 0.44
SCARF1-207ENST00000573867 RHEBQ15382 184 aa17.78■□□□□ 0.44
SCARF1-207ENST00000573867 LINC00528Q8N1L1 170 aa17.78■□□□□ 0.44
SCARF1-207ENST00000573867 LINC00526Q96FQ7 95 aa17.78■□□□□ 0.44
SCARF1-207ENST00000573867 RPS10P5Q9NQ39 176 aa17.78■□□□□ 0.44
SCARF1-207ENST00000573867 IGHV1-58A0A0C4DH39 117 aa17.77■□□□□ 0.44
SCARF1-207ENST00000573867 S100PP25815 95 aa17.77■□□□□ 0.44
SCARF1-207ENST00000573867 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.76■□□□□ 0.43
SCARF1-207ENST00000573867 IGHV3-64A0A075B6Q5 118 aa17.75■□□□□ 0.43
SCARF1-207ENST00000573867 GNB1LQ9BYB4 327 aa17.74■□□□□ 0.43
SCARF1-207ENST00000573867 IGLV4-3A0A075B6K6 122 aa17.73■□□□□ 0.43
SCARF1-207ENST00000573867 COX7A2LO14548 114 aa17.73■□□□□ 0.43
SCARF1-207ENST00000573867 CHTF8P0CG12 524 aa17.73■□□□□ 0.43
SCARF1-207ENST00000573867 INAFM2P0DMQ5 153 aa17.73■□□□□ 0.43
SCARF1-207ENST00000573867 IFI27P40305 119 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-207ENST00000573867 PYGO1Q9Y3Y4 419 aa17.73■□□□□ 0.43
SCARF1-207ENST00000573867 CIRBPQ14011 172 aaKnown RBP17.72■□□□□ 0.43
SCARF1-207ENST00000573867 C5orf38Q86SI9 138 aa17.72■□□□□ 0.43
SCARF1-207ENST00000573867 IFITM10A6NMD0 228 aa17.7■□□□□ 0.42
SCARF1-207ENST00000573867 APOC3P02656 99 aa17.7■□□□□ 0.42
SCARF1-207ENST00000573867 C2orf66Q6UXQ4 117 aa17.7■□□□□ 0.42
SCARF1-207ENST00000573867 NXT2Q9NPJ8 142 aaKnown RBP17.7■□□□□ 0.42
SCARF1-207ENST00000573867 MYCBP2O75592 4640 aa17.7■□□□□ 0.42
SCARF1-207ENST00000573867 PRSS3P2Q8NHM4 247 aa17.69■□□□□ 0.42
SCARF1-207ENST00000573867 KRTAP10-4P60372 401 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-207ENST00000573867 COX6A2Q02221 97 aa17.68■□□□□ 0.42
SCARF1-207ENST00000573867 ORMDL2Q53FV1 153 aa17.68■□□□□ 0.42
SCARF1-207ENST00000573867 ALKBH7Q9BT30 221 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-207ENST00000573867 CYSLTR1Q9Y271 337 aa17.68■□□□□ 0.42
SCARF1-207ENST00000573867 MALP21145 153 aa17.67■□□□□ 0.42
SCARF1-207ENST00000573867 ZC2HC1BQ5TFG8 222 aa17.67■□□□□ 0.42
SCARF1-207ENST00000573867 TGIF2-C20orf24A0A0A6YYL0 155 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms