RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CHTF8P0CG12 524 aa11.08□□□□□ -0.64
SMG6-214ENST00000573827 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
SMG6-214ENST00000573827 NAT8BQ9UHF3 227 aa11.08□□□□□ -0.64
SMG6-214ENST00000573827 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
SMG6-214ENST00000573827 LINC00959A0A1B0GUT2 108 aa11.07□□□□□ -0.64
SMG6-214ENST00000573827 ADIRFQ15847 76 aa11.07□□□□□ -0.64
SMG6-214ENST00000573827 FAM104BQ5XKR9 115 aa11.07□□□□□ -0.64
SMG6-214ENST00000573827 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
SMG6-214ENST00000573827 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
SMG6-214ENST00000573827 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
SMG6-214ENST00000573827 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
SMG6-214ENST00000573827 HIGD2BQ4VC39 106 aa11.06□□□□□ -0.64
SMG6-214ENST00000573827 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
SMG6-214ENST00000573827 J3QL48 77 aa11.05□□□□□ -0.64
SMG6-214ENST00000573827 RPL37AP61513 92 aaKnown RBP11.05□□□□□ -0.64
SMG6-214ENST00000573827 SUMO2P61956 95 aaKnown RBP11.05□□□□□ -0.64
SMG6-214ENST00000573827 PEA15Q15121 130 aa11.05□□□□□ -0.64
SMG6-214ENST00000573827 CFAP161Q6P656 301 aa11.05□□□□□ -0.64
SMG6-214ENST00000573827 A0A087WYN8 130 aa11.04□□□□□ -0.64
SMG6-214ENST00000573827 C7orf77A4D0Y5 90 aa11.04□□□□□ -0.64
SMG6-214ENST00000573827 VCYO14598 125 aa11.04□□□□□ -0.64
SMG6-214ENST00000573827 XCL1P47992 114 aa11.04□□□□□ -0.64
SMG6-214ENST00000573827 A0A1B0GXF2 115 aa11.03□□□□□ -0.64
SMG6-214ENST00000573827 CCL25O15444 150 aa11.03□□□□□ -0.64
SMG6-214ENST00000573827 ZNF664Q8N3J9 261 aa11.03□□□□□ -0.64
SMG6-214ENST00000573827 TMEM101Q96IK0 257 aa11.03□□□□□ -0.64
SMG6-214ENST00000573827 BTF3L4Q96K17 158 aa11.03□□□□□ -0.64
SMG6-214ENST00000573827 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
SMG6-214ENST00000573827 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.65
SMG6-214ENST00000573827 PPP1R17O96001 155 aa11.02□□□□□ -0.65
SMG6-214ENST00000573827 COX6A2Q02221 97 aa11.02□□□□□ -0.65
SMG6-214ENST00000573827 PRSS3P2Q8NHM4 247 aa11.02□□□□□ -0.65
SMG6-214ENST00000573827 FAM104AQ969W3 186 aa11.02□□□□□ -0.65
SMG6-214ENST00000573827 UBE2D4Q9Y2X8 147 aa11.02□□□□□ -0.65
SMG6-214ENST00000573827 CSDC2Q9Y534 153 aaKnown RBP11.02□□□□□ -0.65
SMG6-214ENST00000573827 OXTP01178 125 aa11.01□□□□□ -0.65
SMG6-214ENST00000573827 CAMPP49913 170 aa11.01□□□□□ -0.65
SMG6-214ENST00000573827 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
SMG6-214ENST00000573827 UBR4Q5T4S7 5183 aa11.01□□□□□ -0.65
SMG6-214ENST00000573827 A0A1B0GW15 77 aa11□□□□□ -0.65
SMG6-214ENST00000573827 LINC00862A6NCI5 91 aa11□□□□□ -0.65
SMG6-214ENST00000573827 CD164L2Q6UWJ8 174 aa11□□□□□ -0.65
SMG6-214ENST00000573827 C20orf78Q9BR46 151 aa11□□□□□ -0.65
SMG6-214ENST00000573827 LINC00526Q96FQ7 95 aa10.99□□□□□ -0.65
SMG6-214ENST00000573827 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
SMG6-214ENST00000573827 PPP1R2P9O14990 202 aa10.98□□□□□ -0.65
SMG6-214ENST00000573827 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
SMG6-214ENST00000573827 A0A096LNI7 61 aa10.97□□□□□ -0.65
SMG6-214ENST00000573827 TNFRSF6BO95407 300 aa10.97□□□□□ -0.65
SMG6-214ENST00000573827 FCER1GP30273 86 aa10.97□□□□□ -0.65
SMG6-214ENST00000573827 SS18Q15532 418 aa10.97□□□□□ -0.65
SMG6-214ENST00000573827 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
SMG6-214ENST00000573827 KIR2DL4Q99706 377 aa10.97□□□□□ -0.65
SMG6-214ENST00000573827 D6R8Y8 96 aa10.96□□□□□ -0.65
SMG6-214ENST00000573827 CKS2P33552 79 aa10.96□□□□□ -0.65
SMG6-214ENST00000573827 HBBP68871 147 aa10.96□□□□□ -0.65
SMG6-214ENST00000573827 RNASE13Q5GAN3 156 aaKnown RBP10.96□□□□□ -0.65
SMG6-214ENST00000573827 Q6ZUT4 128 aa10.96□□□□□ -0.65
SMG6-214ENST00000573827 NPYP01303 97 aa10.95□□□□□ -0.66
SMG6-214ENST00000573827 SMIM2Q9BVW6 85 aa10.95□□□□□ -0.66
SMG6-214ENST00000573827 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
SMG6-214ENST00000573827 C1orf196B1AJZ1 125 aa10.94□□□□□ -0.66
SMG6-214ENST00000573827 MT1HL1P0DM35 61 aa10.94□□□□□ -0.66
SMG6-214ENST00000573827 RPL39P62891 51 aaKnown RBP10.94□□□□□ -0.66
SMG6-214ENST00000573827 PHOX2AO14813 284 aa10.93□□□□□ -0.66
SMG6-214ENST00000573827 MAJINQ3KP22 176 aa10.93□□□□□ -0.66
SMG6-214ENST00000573827 CARD19Q96LW7 228 aa10.93□□□□□ -0.66
SMG6-214ENST00000573827 S100A8P05109 93 aa10.92□□□□□ -0.66
SMG6-214ENST00000573827 ATP5L2Q7Z4Y8 100 aa10.92□□□□□ -0.66
SMG6-214ENST00000573827 DPH3Q96FX2 82 aa10.92□□□□□ -0.66
SMG6-214ENST00000573827 TRAV13-1A0A0B4J241 112 aa10.91□□□□□ -0.66
SMG6-214ENST00000573827 F8W036 122 aa10.91□□□□□ -0.66
SMG6-214ENST00000573827 COX7A2LO14548 114 aa10.91□□□□□ -0.66
SMG6-214ENST00000573827 PPBPP02775 128 aa10.91□□□□□ -0.66
SMG6-214ENST00000573827 SYCNQ0VAF6 134 aa10.91□□□□□ -0.66
SMG6-214ENST00000573827 STPG4Q8N801 248 aa10.91□□□□□ -0.66
SMG6-214ENST00000573827 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.66
SMG6-214ENST00000573827 TCAPO15273 167 aa10.9□□□□□ -0.66
SMG6-214ENST00000573827 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
SMG6-214ENST00000573827 Q6ZRU5 148 aa10.9□□□□□ -0.66
SMG6-214ENST00000573827 OPRPNQ99935 248 aaPredicted RBP10.9□□□□□ -0.66
SMG6-214ENST00000573827 MRPS36P82909 103 aaKnown RBP10.89□□□□□ -0.67
SMG6-214ENST00000573827 SPANXA1Q9NS26 97 aa10.89□□□□□ -0.67
SMG6-214ENST00000573827 IGHV3OR16-9A0A0B4J2B5 98 aa10.88□□□□□ -0.67
SMG6-214ENST00000573827 PRSS47A8MTI9 375 aa10.88□□□□□ -0.67
SMG6-214ENST00000573827 ZNF561-AS1K7EIQ3 104 aa10.88□□□□□ -0.67
SMG6-214ENST00000573827 PRR3P79522 188 aaKnown RBP10.88□□□□□ -0.67
SMG6-214ENST00000573827 TMEM136Q6ZRR5 245 aa10.88□□□□□ -0.67
SMG6-214ENST00000573827 C5orf38Q86SI9 138 aa10.88□□□□□ -0.67
SMG6-214ENST00000573827 ORMDL3Q8N138 153 aa10.88□□□□□ -0.67
SMG6-214ENST00000573827 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
SMG6-214ENST00000573827 PNRC1Q12796 327 aaPredicted RBP10.87□□□□□ -0.67
SMG6-214ENST00000573827 C2orf48Q96LS8 159 aa10.87□□□□□ -0.67
SMG6-214ENST00000573827 PRELID3AQ96N28 172 aa10.87□□□□□ -0.67
SMG6-214ENST00000573827 LINC00474Q9P2X8 69 aa10.87□□□□□ -0.67
SMG6-214ENST00000573827 MALP21145 153 aa10.86□□□□□ -0.67
SMG6-214ENST00000573827 PTTG1IPP53801 180 aa10.86□□□□□ -0.67
SMG6-214ENST00000573827 C7orf33Q8WU49 177 aa10.86□□□□□ -0.67
SMG6-214ENST00000573827 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.85□□□□□ -0.67
SMG6-214ENST00000573827 LRP2P98164 4655 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms