RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 EIF5A2Q9GZV4 153 aaKnown RBP11.39□□□□□ -0.59
CHD3-214ENST00000572579 ST20Q9HBF5 79 aa11.39□□□□□ -0.59
CHD3-214ENST00000572579 OSTCQ9NRP0 149 aa11.39□□□□□ -0.59
CHD3-214ENST00000572579 TRBV27A0A0K0K1C4 114 aa11.38□□□□□ -0.59
CHD3-214ENST00000572579 A0A1B0GVG6 124 aa11.38□□□□□ -0.59
CHD3-214ENST00000572579 PHOX2AO14813 284 aa11.38□□□□□ -0.59
CHD3-214ENST00000572579 NDUFS6O75380 124 aaKnown RBP11.38□□□□□ -0.59
CHD3-214ENST00000572579 ZNF25P17030 456 aaPredicted RBP11.38□□□□□ -0.59
CHD3-214ENST00000572579 CDC42SE2Q9NRR3 84 aa11.38□□□□□ -0.59
CHD3-214ENST00000572579 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
CHD3-214ENST00000572579 CCL25O15444 150 aa11.37□□□□□ -0.59
CHD3-214ENST00000572579 Q6ZRU5 148 aa11.37□□□□□ -0.59
CHD3-214ENST00000572579 NRACQ8N912 160 aa11.37□□□□□ -0.59
CHD3-214ENST00000572579 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
CHD3-214ENST00000572579 A0A096LNI7 61 aa11.36□□□□□ -0.59
CHD3-214ENST00000572579 IGKV2-24A0A0C4DH68 120 aa11.36□□□□□ -0.59
CHD3-214ENST00000572579 MAJINQ3KP22 176 aa11.36□□□□□ -0.59
CHD3-214ENST00000572579 MRPL52Q86TS9 123 aaKnown RBP11.36□□□□□ -0.59
CHD3-214ENST00000572579 MRAP2Q96G30 205 aa11.35□□□□□ -0.59
CHD3-214ENST00000572579 SRSF3P84103 164 aaKnown RBP11.34□□□□□ -0.59
CHD3-214ENST00000572579 ZNF664Q8N3J9 261 aa11.34□□□□□ -0.59
CHD3-214ENST00000572579 ISOC2Q96AB3 205 aa11.34□□□□□ -0.59
CHD3-214ENST00000572579 RPL23P62829 140 aaKnown RBP11.33□□□□□ -0.6
CHD3-214ENST00000572579 STPG4Q8N801 248 aa11.33□□□□□ -0.6
CHD3-214ENST00000572579 BORCS7Q96B45 105 aa11.33□□□□□ -0.6
CHD3-214ENST00000572579 TMEM101Q96IK0 257 aa11.33□□□□□ -0.6
CHD3-214ENST00000572579 PLA2G2DQ9UNK4 145 aa11.33□□□□□ -0.6
CHD3-214ENST00000572579 IGHV1-58A0A0C4DH39 117 aa11.32□□□□□ -0.6
CHD3-214ENST00000572579 CD164L2Q6UWJ8 174 aa11.32□□□□□ -0.6
CHD3-214ENST00000572579 BTF3L4Q96K17 158 aa11.32□□□□□ -0.6
CHD3-214ENST00000572579 C7orf77A4D0Y5 90 aa11.31□□□□□ -0.6
CHD3-214ENST00000572579 VCYO14598 125 aa11.31□□□□□ -0.6
CHD3-214ENST00000572579 TMEM241Q24JQ0 296 aa11.31□□□□□ -0.6
CHD3-214ENST00000572579 FAM104AQ969W3 186 aa11.31□□□□□ -0.6
CHD3-214ENST00000572579 PRR3P79522 188 aaKnown RBP11.3□□□□□ -0.6
CHD3-214ENST00000572579 RIGQ13278 110 aa11.3□□□□□ -0.6
CHD3-214ENST00000572579 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
CHD3-214ENST00000572579 RNASE13Q5GAN3 156 aaKnown RBP11.3□□□□□ -0.6
CHD3-214ENST00000572579 UBE2D4Q9Y2X8 147 aa11.3□□□□□ -0.6
CHD3-214ENST00000572579 SUMO2P61956 95 aaKnown RBP11.29□□□□□ -0.6
CHD3-214ENST00000572579 ODF1Q14990 250 aa11.29□□□□□ -0.6
CHD3-214ENST00000572579 SS18Q15532 418 aa11.29□□□□□ -0.6
CHD3-214ENST00000572579 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
CHD3-214ENST00000572579 LRP2P98164 4655 aa11.28□□□□□ -0.6
CHD3-214ENST00000572579 SMIM27A0A1W2PRY6 76 aa11.28□□□□□ -0.6
CHD3-214ENST00000572579 C7orf33Q8WU49 177 aa11.28□□□□□ -0.6
CHD3-214ENST00000572579 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
CHD3-214ENST00000572579 NAT8BQ9UHF3 227 aa11.28□□□□□ -0.6
CHD3-214ENST00000572579 CSDC2Q9Y534 153 aaKnown RBP11.28□□□□□ -0.6
CHD3-214ENST00000572579 FAM74A3Q4VXF1 159 aa11.27□□□□□ -0.61
CHD3-214ENST00000572579 IGLV4-69A0A075B6H9 119 aa11.26□□□□□ -0.61
CHD3-214ENST00000572579 SYCNQ0VAF6 134 aa11.26□□□□□ -0.61
CHD3-214ENST00000572579 ADIRFQ15847 76 aa11.26□□□□□ -0.61
CHD3-214ENST00000572579 FCER1GP30273 86 aa11.25□□□□□ -0.61
CHD3-214ENST00000572579 CAMPP49913 170 aa11.25□□□□□ -0.61
CHD3-214ENST00000572579 Q6ZUT4 128 aa11.25□□□□□ -0.61
CHD3-214ENST00000572579 TRBV24-1A0A075B6N3 115 aa11.24□□□□□ -0.61
CHD3-214ENST00000572579 TRAV13-1A0A0B4J241 112 aa11.24□□□□□ -0.61
CHD3-214ENST00000572579 C1orf196B1AJZ1 125 aa11.24□□□□□ -0.61
CHD3-214ENST00000572579 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHD3-214ENST00000572579 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
CHD3-214ENST00000572579 NAT8Q9UHE5 227 aa11.24□□□□□ -0.61
CHD3-214ENST00000572579 A0A1W2PNN7 141 aa11.23□□□□□ -0.61
CHD3-214ENST00000572579 ZNF561-AS1K7EIQ3 104 aa11.23□□□□□ -0.61
CHD3-214ENST00000572579 PPP1R17O96001 155 aa11.23□□□□□ -0.61
CHD3-214ENST00000572579 PTTG1IPP53801 180 aa11.23□□□□□ -0.61
CHD3-214ENST00000572579 RPL39P62891 51 aaKnown RBP11.23□□□□□ -0.61
CHD3-214ENST00000572579 C5orf38Q86SI9 138 aa11.23□□□□□ -0.61
CHD3-214ENST00000572579 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
CHD3-214ENST00000572579 COX7A2LO14548 114 aa11.22□□□□□ -0.61
CHD3-214ENST00000572579 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
CHD3-214ENST00000572579 C20orf78Q9BR46 151 aa11.22□□□□□ -0.61
CHD3-214ENST00000572579 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
CHD3-214ENST00000572579 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
CHD3-214ENST00000572579 A0A1B0GXF2 115 aa11.21□□□□□ -0.61
CHD3-214ENST00000572579 TNFRSF6BO95407 300 aa11.21□□□□□ -0.61
CHD3-214ENST00000572579 RPL32P62910 135 aaKnown RBP11.21□□□□□ -0.61
CHD3-214ENST00000572579 RNF213Q63HN8 5207 aa11.2□□□□□ -0.62
CHD3-214ENST00000572579 LINC00862A6NCI5 91 aa11.2□□□□□ -0.62
CHD3-214ENST00000572579 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
CHD3-214ENST00000572579 PPP1R2P9O14990 202 aa11.2□□□□□ -0.62
CHD3-214ENST00000572579 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
CHD3-214ENST00000572579 D6R8Y8 96 aa11.19□□□□□ -0.62
CHD3-214ENST00000572579 NPYP01303 97 aa11.19□□□□□ -0.62
CHD3-214ENST00000572579 MALP21145 153 aa11.19□□□□□ -0.62
CHD3-214ENST00000572579 CKS2P33552 79 aa11.19□□□□□ -0.62
CHD3-214ENST00000572579 KRTAP10-8P60410 259 aa11.19□□□□□ -0.62
CHD3-214ENST00000572579 PEA15Q15121 130 aa11.19□□□□□ -0.62
CHD3-214ENST00000572579 MRPL54Q6P161 138 aaKnown RBP11.19□□□□□ -0.62
CHD3-214ENST00000572579 A0A0J9YXV3 536 aa11.18□□□□□ -0.62
CHD3-214ENST00000572579 LOC107984640A0A0U1RRK4 108 aa11.17□□□□□ -0.62
CHD3-214ENST00000572579 TCAPO15273 167 aa11.17□□□□□ -0.62
CHD3-214ENST00000572579 SPINK6Q6UWN8 80 aa11.17□□□□□ -0.62
CHD3-214ENST00000572579 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
CHD3-214ENST00000572579 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
CHD3-214ENST00000572579 SMIM2Q9BVW6 85 aa11.17□□□□□ -0.62
CHD3-214ENST00000572579 IGHV3OR16-9A0A0B4J2B5 98 aa11.16□□□□□ -0.62
CHD3-214ENST00000572579 A0A1B0GW15 77 aa11.16□□□□□ -0.62
CHD3-214ENST00000572579 APOMO95445 188 aa11.16□□□□□ -0.62
CHD3-214ENST00000572579 HBBP68871 147 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms