RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 LINC01587Q99440 93 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 TMEM191AQ9H0A3 160 aa4.5□□□□□ -1.69
CHD3-213ENST00000571249 TRAV21A0A0B4J279 112 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 IGLV5-39A0A0G2JS06 123 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 A0A0J9YX75 114 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 M0R2Z0 102 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 ZNF324O75467 553 aaPredicted RBP4.49□□□□□ -1.69
CHD3-213ENST00000571249 ORM1P02763 201 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 CRYGDP07320 174 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 PMCHP20382 165 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 RPL24P83731 157 aaKnown RBP4.49□□□□□ -1.69
CHD3-213ENST00000571249 SPINK13Q1W4C9 94 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 PRR9Q5T870 116 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 FAM104BQ5XKR9 115 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 AMTNQ6UX39 209 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 WFDC10BQ8IUB3 73 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 LINC00612Q8N6U2 182 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 CHCHD1Q96BP2 118 aaKnown RBP4.49□□□□□ -1.69
CHD3-213ENST00000571249 C16orf74Q96GX8 76 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 NIT2Q9NQR4 276 aa4.49□□□□□ -1.69
CHD3-213ENST00000571249 A0A087WZ39 114 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 LECT2O14960 151 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 PPBPP02775 128 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 RAB4AP20338 218 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 NTF3P20783 257 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 CACNG7P62955 275 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 GAGE5Q13069 117 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 GAGE6Q13070 117 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 TDRG1Q3Y452 100 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 NIT1Q86X76 327 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 C10orf126Q8N4M7 172 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 Q9HAA7 133 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
CHD3-213ENST00000571249 ICOSQ9Y6W8 199 aa4.48□□□□□ -1.69
CHD3-213ENST00000571249 IGLV5-37A0A075B6J1 123 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 TMSB15BA0A087X1C1 80 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 IGLV9-49A0A0B4J1Y8 123 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 LINC01546A6NGU7 62 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 DUSP14O95147 198 aaKnown RBP4.47□□□□□ -1.69
CHD3-213ENST00000571249 RPL13AP40429 203 aaKnown RBP4.47□□□□□ -1.69
CHD3-213ENST00000571249 LEPP41159 167 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 IQCJQ1A5X6 159 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 MRPL51Q4U2R6 128 aaKnown RBP4.47□□□□□ -1.69
CHD3-213ENST00000571249 RNF185Q96GF1 192 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 LAMTOR2Q9Y2Q5 125 aa4.47□□□□□ -1.69
CHD3-213ENST00000571249 HSBP1O75506 76 aa4.46□□□□□ -1.7
CHD3-213ENST00000571249 LINC00614P0C842 121 aa4.46□□□□□ -1.7
CHD3-213ENST00000571249 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
CHD3-213ENST00000571249 TWIST1Q15672 202 aa4.46□□□□□ -1.7
CHD3-213ENST00000571249 Q6ZVQ6 151 aa4.46□□□□□ -1.7
CHD3-213ENST00000571249 ORMDL3Q8N138 153 aa4.46□□□□□ -1.7
CHD3-213ENST00000571249 Q8N976 141 aa4.46□□□□□ -1.7
CHD3-213ENST00000571249 SAMD10Q9BYL1 202 aa4.46□□□□□ -1.7
CHD3-213ENST00000571249 NAGKQ9UJ70 344 aa4.46□□□□□ -1.7
CHD3-213ENST00000571249 IGLV5-45A0A087WSX0 123 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 C7orf71A4D174 169 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 PAX4O43316 350 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 PKIAP61925 76 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 TEX43Q6ZNM6 134 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 Q6ZQT7 251 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 AMN1Q8IY45 258 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 PRR26Q8N8Z3 221 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 OR10AG1Q8NH19 301 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 TMEM263Q8WUH6 116 aaKnown RBP4.45□□□□□ -1.7
CHD3-213ENST00000571249 PRELID3AQ96N28 172 aa4.45□□□□□ -1.7
CHD3-213ENST00000571249 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 IGHV1-24A0A0C4DH33 117 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 A0A0J9YXV3 536 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 IBA57-AS1B1ANH7 110 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 D6R8Y8 96 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 PRSS2P07478 247 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 C3orf79P0CE67 100 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 RNASE3P12724 160 aaKnown RBP4.44□□□□□ -1.7
CHD3-213ENST00000571249 RNASE4P34096 147 aaKnown RBP4.44□□□□□ -1.7
CHD3-213ENST00000571249 NEGR1Q7Z3B1 354 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 FAM19A2Q8N3H0 131 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 MRAP2Q96G30 205 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 C9orf85Q96MD7 179 aa4.44□□□□□ -1.7
CHD3-213ENST00000571249 TRGV2A0A075B6R0 118 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 H3BVH4 76 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 M0R381 172 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 NPYP01303 97 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 CKS2P33552 79 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 RPL32P62910 135 aaKnown RBP4.43□□□□□ -1.7
CHD3-213ENST00000571249 MRPL23Q16540 153 aaKnown RBP4.43□□□□□ -1.7
CHD3-213ENST00000571249 Q6ZTI0 123 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 SMIM15Q7Z3B0 74 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 ZNF664Q8N3J9 261 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 NRACQ8N912 160 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 PTH2Q96A98 100 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 C20orf144Q9BQM9 153 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 NXT2Q9NPJ8 142 aaKnown RBP4.43□□□□□ -1.7
CHD3-213ENST00000571249 KIF25-AS1Q9Y6Z4 181 aa4.43□□□□□ -1.7
CHD3-213ENST00000571249 IGHV1OR15-1A0A075B7D0 117 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 A0A096LNJ9 63 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 IGHV3-16A0A0C4DH30 117 aa4.42□□□□□ -1.7
CHD3-213ENST00000571249 MUC21A0A0G2JKD1 596 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms