RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 NPVFQ9HCQ7 196 aa2.37□□□□□ -2.03
CHD9-220ENST00000569794 C22orf24Q9Y442 160 aa2.37□□□□□ -2.03
CHD9-220ENST00000569794 WNK3Q9BYP7 1800 aa2.37□□□□□ -2.03
CHD9-220ENST00000569794 MYO9BQ13459 2157 aa2.37□□□□□ -2.03
CHD9-220ENST00000569794 SDK2Q58EX2 2172 aa2.37□□□□□ -2.03
CHD9-220ENST00000569794 MYO15AQ9UKN7 3530 aa2.37□□□□□ -2.03
CHD9-220ENST00000569794 SSC5DA1L4H1 1573 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 DNAH12Q6ZR08 3092 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 SHANK1Q9Y566 2161 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 FAM186AA6NE01 2351 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 NUPR2A6NF83 97 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 H3BQF6 201 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 NUPR1O60356 82 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 HCP5Q6MZN7 132 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 COA5Q86WW8 74 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 NDUFA11Q86Y39 141 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 LCN9Q8WX39 176 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 WFDC10AQ9H1F0 79 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 LINC00474Q9P2X8 69 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 HEATR5BQ9P2D3 2071 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 ITPR3Q14573 2671 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 ASPMQ8IZT6 3477 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 MYH1P12882 1939 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 DOT1LQ8TEK3 1739 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 IFT172Q9UG01 1749 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 LAMB2P55268 1798 aa2.36□□□□□ -2.03
CHD9-220ENST00000569794 UBR5O95071 2799 aaPredicted RBP2.35□□□□□ -2.03
CHD9-220ENST00000569794 TEX15Q9BXT5 2789 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 CNOT1A5YKK6 2376 aaKnown RBP2.35□□□□□ -2.03
CHD9-220ENST00000569794 CACNA1HO95180 2353 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 TRAV23DV6A0A075B6W5 121 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 TRBV6-5A0A0K0K1A5 114 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 NAP1L6A6NFF2 107 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 JMJD7-PLA2G4BH0Y9G9 81 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 FAUP35544 74 aaKnown RBP2.35□□□□□ -2.03
CHD9-220ENST00000569794 ASIPP42127 132 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 SEC11AP67812 179 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 PEA15Q15121 130 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 CRCT1Q9UGL9 99 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 SCN3AQ9NY46 2000 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 MAP2P11137 1827 aaKnown RBP2.35□□□□□ -2.03
CHD9-220ENST00000569794 WDR87Q6ZQQ6 2873 aa2.35□□□□□ -2.03
CHD9-220ENST00000569794 MYH9P35579 1960 aaKnown RBP2.34□□□□□ -2.03
CHD9-220ENST00000569794 PIEZO2Q9H5I5 2752 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 MYO9AB2RTY4 2548 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 NFAT5O94916 1531 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 SPTBN2O15020 2390 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 A0A0J9YY99 117 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 CRYM-AS1A6NIL9 109 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 IGKV1-17P01599 117 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 FREM3P0C091 2139 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 CCL8P80075 99 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 C10orf128Q5T292 105 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 CYP2G1PQ6ZSU1 146 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 C15orf53Q8NAA6 179 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 ODF3Q96PU9 254 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 CYP4F30PQ9H0H9 118 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 TMEM14CQ9P0S9 112 aa2.34□□□□□ -2.03
CHD9-220ENST00000569794 EP300Q09472 2414 aaPredicted RBP2.34□□□□□ -2.03
CHD9-220ENST00000569794 ITPR1Q14643 2758 aa2.34□□□□□ -2.04
CHD9-220ENST00000569794 SMG1Q96Q15 3661 aaKnown RBP2.33□□□□□ -2.04
CHD9-220ENST00000569794 KDM3BQ7LBC6 1761 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 MUC4Q99102 2169 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 ALPK3Q96L96 1907 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 ATOX1O00244 68 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 SIX6O95475 246 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 GYPAP02724 150 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 RNASE3P12724 160 aaKnown RBP2.33□□□□□ -2.04
CHD9-220ENST00000569794 MPV17LQ2QL34 196 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 KRTAP21-3Q3LHN1 58 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 FAM213BQ8TBF2 198 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 TSLPQ969D9 159 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 MGST2Q99735 147 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 CITO14578 2027 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 NRXN2Q9P2S2 1712 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 PPLO60437 1756 aa2.33□□□□□ -2.04
CHD9-220ENST00000569794 TENM4Q6N022 2769 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 COL5A3P25940 1745 aaPredicted RBP2.32□□□□□ -2.04
CHD9-220ENST00000569794 SPEGQ15772 3267 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 RGPD5Q99666 1765 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 IGKV3-7A0A075B6H7 116 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 UQCRHLA0A096LP55 91 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 J3QKU1 62 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 K7EP34 96 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 PRB1P04280 392 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 UQCRHP07919 91 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 MANBALQ9NQG1 85 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 ZZEF1O43149 2961 aa2.32□□□□□ -2.04
CHD9-220ENST00000569794 DLEC1Q9Y238 1755 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 KIAA1549Q9HCM3 1950 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 FBN2P35556 2912 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 CYB5AP00167 134 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 IGLV3-1P01715 115 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 ZNF818PQ6ZRF7 136 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 RP1P56715 2156 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 CEP250Q9BV73 2442 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 CFAP46Q8IYW2 2715 aa2.31□□□□□ -2.04
CHD9-220ENST00000569794 BCORQ6W2J9 1755 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms