RNA–Protein interactions for RNA: ENST00000569637.6

NIP7-208, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2 BASIC

Gene NIP7, Length 1,099 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-208ENST00000569637 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
NIP7-208ENST00000569637 SDIM1Q6ZPB5 146 aa9.51□□□□□ -0.89
NIP7-208ENST00000569637 FAT1Q14517 4588 aa9.51□□□□□ -0.89
NIP7-208ENST00000569637 F8W036 122 aa9.5□□□□□ -0.89
NIP7-208ENST00000569637 RAB14P61106 215 aa9.5□□□□□ -0.89
NIP7-208ENST00000569637 HBBP68871 147 aa9.5□□□□□ -0.89
NIP7-208ENST00000569637 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.5□□□□□ -0.89
NIP7-208ENST00000569637 VPS13BQ7Z7G8 4022 aa9.5□□□□□ -0.89
NIP7-208ENST00000569637 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
NIP7-208ENST00000569637 SLPIP03973 132 aa9.49□□□□□ -0.89
NIP7-208ENST00000569637 CKS2P33552 79 aa9.49□□□□□ -0.89
NIP7-208ENST00000569637 FOXI1Q12951 378 aa9.49□□□□□ -0.89
NIP7-208ENST00000569637 SS18Q15532 418 aa9.49□□□□□ -0.89
NIP7-208ENST00000569637 MRPL54Q6P161 138 aaKnown RBP9.49□□□□□ -0.89
NIP7-208ENST00000569637 ZNF664Q8N3J9 261 aa9.49□□□□□ -0.89
NIP7-208ENST00000569637 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
NIP7-208ENST00000569637 CDC42SE2Q9NRR3 84 aa9.49□□□□□ -0.89
NIP7-208ENST00000569637 TRBV24-1A0A075B6N3 115 aa9.48□□□□□ -0.89
NIP7-208ENST00000569637 GVQW2A0A096LPI5 108 aaPredicted RBP9.48□□□□□ -0.89
NIP7-208ENST00000569637 TCAPO15273 167 aa9.48□□□□□ -0.89
NIP7-208ENST00000569637 CCL25O15444 150 aa9.48□□□□□ -0.89
NIP7-208ENST00000569637 XCL1P47992 114 aa9.48□□□□□ -0.89
NIP7-208ENST00000569637 HIGD2BQ4VC39 106 aa9.48□□□□□ -0.89
NIP7-208ENST00000569637 TMEM18Q96B42 140 aa9.48□□□□□ -0.89
NIP7-208ENST00000569637 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
NIP7-208ENST00000569637 A0A1B0GXF2 115 aa9.47□□□□□ -0.89
NIP7-208ENST00000569637 RPL32P62910 135 aaKnown RBP9.47□□□□□ -0.89
NIP7-208ENST00000569637 PNRC1Q12796 327 aaPredicted RBP9.47□□□□□ -0.89
NIP7-208ENST00000569637 CIRBPQ14011 172 aaKnown RBP9.47□□□□□ -0.89
NIP7-208ENST00000569637 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
NIP7-208ENST00000569637 SRRM2Q9UQ35 2752 aaKnown RBP9.47□□□□□ -0.89
NIP7-208ENST00000569637 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.89
NIP7-208ENST00000569637 D6R8Y8 96 aa9.46□□□□□ -0.9
NIP7-208ENST00000569637 PANO1I0J062 215 aa9.46□□□□□ -0.9
NIP7-208ENST00000569637 TNFRSF6BO95407 300 aa9.46□□□□□ -0.9
NIP7-208ENST00000569637 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
NIP7-208ENST00000569637 UBE2D4Q9Y2X8 147 aa9.46□□□□□ -0.9
NIP7-208ENST00000569637 IGHV1-58A0A0C4DH39 117 aa9.45□□□□□ -0.9
NIP7-208ENST00000569637 PHOX2AO14813 284 aa9.45□□□□□ -0.9
NIP7-208ENST00000569637 PPBPP02775 128 aa9.45□□□□□ -0.9
NIP7-208ENST00000569637 RPL37AP61513 92 aaKnown RBP9.45□□□□□ -0.9
NIP7-208ENST00000569637 CD164L2Q6UWJ8 174 aa9.45□□□□□ -0.9
NIP7-208ENST00000569637 SMIM2Q9BVW6 85 aa9.45□□□□□ -0.9
NIP7-208ENST00000569637 C1orf196B1AJZ1 125 aa9.44□□□□□ -0.9
NIP7-208ENST00000569637 J3QL48 77 aa9.44□□□□□ -0.9
NIP7-208ENST00000569637 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
NIP7-208ENST00000569637 ANAPC16Q96DE5 110 aa9.44□□□□□ -0.9
NIP7-208ENST00000569637 DPH3Q96FX2 82 aa9.44□□□□□ -0.9
NIP7-208ENST00000569637 TIMM21Q9BVV7 248 aa9.44□□□□□ -0.9
NIP7-208ENST00000569637 ORMDL3Q8N138 153 aa9.43□□□□□ -0.9
NIP7-208ENST00000569637 PKIGQ9Y2B9 76 aa9.43□□□□□ -0.9
NIP7-208ENST00000569637 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
NIP7-208ENST00000569637 NPYP01303 97 aa9.42□□□□□ -0.9
NIP7-208ENST00000569637 MT-ND4LP03901 98 aa9.42□□□□□ -0.9
NIP7-208ENST00000569637 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
NIP7-208ENST00000569637 COX6A2Q02221 97 aa9.42□□□□□ -0.9
NIP7-208ENST00000569637 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
NIP7-208ENST00000569637 ZNF561-AS1K7EIQ3 104 aa9.41□□□□□ -0.9
NIP7-208ENST00000569637 RNASE13Q5GAN3 156 aaKnown RBP9.41□□□□□ -0.9
NIP7-208ENST00000569637 CLLU1Q5K131 121 aa9.41□□□□□ -0.9
NIP7-208ENST00000569637 Q6ZUT4 128 aa9.41□□□□□ -0.9
NIP7-208ENST00000569637 A0A087WYN8 130 aa9.4□□□□□ -0.9
NIP7-208ENST00000569637 TRAV13-1A0A0B4J241 112 aa9.4□□□□□ -0.9
NIP7-208ENST00000569637 COX7A2LO14548 114 aa9.4□□□□□ -0.9
NIP7-208ENST00000569637 MALP21145 153 aa9.4□□□□□ -0.9
NIP7-208ENST00000569637 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
NIP7-208ENST00000569637 PRELID3AQ96N28 172 aa9.4□□□□□ -0.9
NIP7-208ENST00000569637 SPANXA1Q9NS26 97 aa9.4□□□□□ -0.9
NIP7-208ENST00000569637 IGKV2-24A0A0C4DH68 120 aa9.39□□□□□ -0.91
NIP7-208ENST00000569637 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
NIP7-208ENST00000569637 PRSS3P2Q8NHM4 247 aa9.39□□□□□ -0.91
NIP7-208ENST00000569637 CARD19Q96LW7 228 aa9.39□□□□□ -0.91
NIP7-208ENST00000569637 PLAC8Q9NZF1 115 aa9.39□□□□□ -0.91
NIP7-208ENST00000569637 LAMTOR2Q9Y2Q5 125 aa9.39□□□□□ -0.91
NIP7-208ENST00000569637 RAB5AP20339 215 aa9.38□□□□□ -0.91
NIP7-208ENST00000569637 MAJINQ3KP22 176 aa9.38□□□□□ -0.91
NIP7-208ENST00000569637 LINC00526Q96FQ7 95 aa9.38□□□□□ -0.91
NIP7-208ENST00000569637 LINC00474Q9P2X8 69 aa9.38□□□□□ -0.91
NIP7-208ENST00000569637 MRPS36P82909 103 aaKnown RBP9.37□□□□□ -0.91
NIP7-208ENST00000569637 SYCNQ0VAF6 134 aa9.37□□□□□ -0.91
NIP7-208ENST00000569637 MYCBP2O75592 4640 aa9.37□□□□□ -0.91
NIP7-208ENST00000569637 A0A096LNI7 61 aa9.36□□□□□ -0.91
NIP7-208ENST00000569637 APOMO95445 188 aa9.36□□□□□ -0.91
NIP7-208ENST00000569637 OXTP01178 125 aa9.36□□□□□ -0.91
NIP7-208ENST00000569637 UQCC3Q6UW78 93 aa9.36□□□□□ -0.91
NIP7-208ENST00000569637 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
NIP7-208ENST00000569637 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
NIP7-208ENST00000569637 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
NIP7-208ENST00000569637 PRSS47A8MTI9 375 aa9.35□□□□□ -0.91
NIP7-208ENST00000569637 IFI27P40305 119 aaPredicted RBP9.35□□□□□ -0.91
NIP7-208ENST00000569637 STPG4Q8N801 248 aa9.35□□□□□ -0.91
NIP7-208ENST00000569637 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
NIP7-208ENST00000569637 FAM104AQ969W3 186 aa9.34□□□□□ -0.91
NIP7-208ENST00000569637 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
NIP7-208ENST00000569637 LOC389332A0A1B0GUA5 103 aa9.33□□□□□ -0.92
NIP7-208ENST00000569637 IFITM10A6NMD0 228 aa9.33□□□□□ -0.92
NIP7-208ENST00000569637 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
NIP7-208ENST00000569637 OR10D4PQ8NGN7 298 aa9.33□□□□□ -0.92
NIP7-208ENST00000569637 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
NIP7-208ENST00000569637 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms