RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 MRPL52Q86TS9 123 aaKnown RBP6.46□□□□□ -1.38
CLN6-209ENST00000569336 SMIM2Q9BVW6 85 aa6.46□□□□□ -1.38
CLN6-209ENST00000569336 SRRM2Q9UQ35 2752 aaKnown RBP6.46□□□□□ -1.38
CLN6-209ENST00000569336 LAMTOR2Q9Y2Q5 125 aa6.46□□□□□ -1.38
CLN6-209ENST00000569336 KRTAP10-1P60331 282 aa6.45□□□□□ -1.38
CLN6-209ENST00000569336 DGAT2L7PQ6IED9 249 aa6.45□□□□□ -1.38
CLN6-209ENST00000569336 CLRN3Q8NCR9 226 aa6.45□□□□□ -1.38
CLN6-209ENST00000569336 IGKV3OR2-268A0A0C4DH90 116 aa6.44□□□□□ -1.38
CLN6-209ENST00000569336 NPYP01303 97 aa6.44□□□□□ -1.38
CLN6-209ENST00000569336 S100PP25815 95 aa6.44□□□□□ -1.38
CLN6-209ENST00000569336 KRTAP26-1Q6PEX3 210 aa6.44□□□□□ -1.38
CLN6-209ENST00000569336 PRELID3AQ96N28 172 aa6.44□□□□□ -1.38
CLN6-209ENST00000569336 CSDC2Q9Y534 153 aaKnown RBP6.44□□□□□ -1.38
CLN6-209ENST00000569336 RHEBQ15382 184 aa6.43□□□□□ -1.38
CLN6-209ENST00000569336 CFAP161Q6P656 301 aa6.43□□□□□ -1.38
CLN6-209ENST00000569336 TMEM136Q6ZRR5 245 aa6.43□□□□□ -1.38
CLN6-209ENST00000569336 TIMM21Q9BVV7 248 aa6.43□□□□□ -1.38
CLN6-209ENST00000569336 MAP1LC3AQ9H492 121 aa6.43□□□□□ -1.38
CLN6-209ENST00000569336 CCL25O15444 150 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 RAB5AP20339 215 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 SS18Q15532 418 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 NDUFA5Q16718 116 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 C10orf91Q5T1B1 145 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 Q8N1X5 172 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 ZNF664Q8N3J9 261 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 CHCHD10Q8WYQ3 142 aaPredicted RBP6.42□□□□□ -1.38
CLN6-209ENST00000569336 CDC42SE2Q9NRR3 84 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 AP5S1Q9NUS5 200 aa6.42□□□□□ -1.38
CLN6-209ENST00000569336 CARHSP1Q9Y2V2 147 aaKnown RBP6.42□□□□□ -1.38
CLN6-209ENST00000569336 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.41□□□□□ -1.38
CLN6-209ENST00000569336 hDV102S1A0JD36 115 aa6.41□□□□□ -1.38
CLN6-209ENST00000569336 GAGE12HA6NDE8 117 aa6.41□□□□□ -1.38
CLN6-209ENST00000569336 PRSS1P07477 247 aa6.41□□□□□ -1.38
CLN6-209ENST00000569336 COX19Q49B96 90 aa6.41□□□□□ -1.38
CLN6-209ENST00000569336 Q6ZSA8 131 aa6.41□□□□□ -1.38
CLN6-209ENST00000569336 SPANXA1Q9NS26 97 aa6.41□□□□□ -1.38
CLN6-209ENST00000569336 UBE2D4Q9Y2X8 147 aa6.41□□□□□ -1.38
CLN6-209ENST00000569336 DNAH8Q96JB1 4490 aa6.4□□□□□ -1.38
CLN6-209ENST00000569336 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.38
CLN6-209ENST00000569336 LINC00959A0A1B0GUT2 108 aa6.4□□□□□ -1.38
CLN6-209ENST00000569336 C1orf196B1AJZ1 125 aa6.4□□□□□ -1.38
CLN6-209ENST00000569336 K7EMI3 77 aa6.4□□□□□ -1.38
CLN6-209ENST00000569336 XCL1P47992 114 aa6.4□□□□□ -1.38
CLN6-209ENST00000569336 XGP55808 180 aa6.4□□□□□ -1.38
CLN6-209ENST00000569336 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.38
CLN6-209ENST00000569336 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
CLN6-209ENST00000569336 MT-ND6P03923 174 aa6.39□□□□□ -1.39
CLN6-209ENST00000569336 IFI27P40305 119 aaPredicted RBP6.39□□□□□ -1.39
CLN6-209ENST00000569336 RPS10P5Q9NQ39 176 aa6.39□□□□□ -1.39
CLN6-209ENST00000569336 GVQW2A0A096LPI5 108 aaPredicted RBP6.38□□□□□ -1.39
CLN6-209ENST00000569336 EPM2AB3EWF7 344 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 SNAPINO95295 136 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 G0S2P27469 103 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 RPL39P62891 51 aaKnown RBP6.38□□□□□ -1.39
CLN6-209ENST00000569336 FOXI1Q12951 378 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 LINC01620Q4KN68 170 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 ORMDL2Q53FV1 153 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 CD164L2Q6UWJ8 174 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 Q6ZUT4 128 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 SVBPQ8N300 66 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 Q8N8P6 123 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 C15orf56Q8N910 161 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 C9orf163Q8N9P6 203 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 GNB1LQ9BYB4 327 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 NXT2Q9NPJ8 142 aaKnown RBP6.38□□□□□ -1.39
CLN6-209ENST00000569336 PKIGQ9Y2B9 76 aa6.38□□□□□ -1.39
CLN6-209ENST00000569336 IGHV3-64A0A075B6Q5 118 aa6.37□□□□□ -1.39
CLN6-209ENST00000569336 IGHV1-58A0A0C4DH39 117 aa6.37□□□□□ -1.39
CLN6-209ENST00000569336 LOC389332A0A1B0GUA5 103 aa6.37□□□□□ -1.39
CLN6-209ENST00000569336 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
CLN6-209ENST00000569336 APOC3P02656 99 aa6.37□□□□□ -1.39
CLN6-209ENST00000569336 MRPS36P82909 103 aaKnown RBP6.37□□□□□ -1.39
CLN6-209ENST00000569336 CYSLTR1Q9Y271 337 aa6.37□□□□□ -1.39
CLN6-209ENST00000569336 TRAV13-1A0A0B4J241 112 aa6.36□□□□□ -1.39
CLN6-209ENST00000569336 IFITM10A6NMD0 228 aa6.36□□□□□ -1.39
CLN6-209ENST00000569336 COX7A2LO14548 114 aa6.36□□□□□ -1.39
CLN6-209ENST00000569336 MALP21145 153 aa6.36□□□□□ -1.39
CLN6-209ENST00000569336 RNASE13Q5GAN3 156 aaKnown RBP6.36□□□□□ -1.39
CLN6-209ENST00000569336 Q5VSD8 79 aa6.36□□□□□ -1.39
CLN6-209ENST00000569336 CHAC1Q9BUX1 264 aa6.36□□□□□ -1.39
CLN6-209ENST00000569336 PYGO1Q9Y3Y4 419 aa6.36□□□□□ -1.39
CLN6-209ENST00000569336 APOMO95445 188 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 NPSP0C0P6 89 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 HAMPP81172 84 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 HIGD2BQ4VC39 106 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 Q6ZN92 141 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 SCXQ7RTU7 201 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 TMEM141Q96I45 108 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 C2orf88Q9BSF0 95 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 FAM30AQ9NZY2 134 aa6.35□□□□□ -1.39
CLN6-209ENST00000569336 FAT1Q14517 4588 aa6.34□□□□□ -1.39
CLN6-209ENST00000569336 LINC01549A6NIU2 74 aa6.34□□□□□ -1.39
CLN6-209ENST00000569336 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
CLN6-209ENST00000569336 PAPPA-AS1Q5QFB9 102 aa6.34□□□□□ -1.39
CLN6-209ENST00000569336 C2orf66Q6UXQ4 117 aa6.34□□□□□ -1.39
CLN6-209ENST00000569336 TEX43Q6ZNM6 134 aa6.34□□□□□ -1.39
CLN6-209ENST00000569336 TGIF2-C20orf24A0A0A6YYL0 155 aa6.33□□□□□ -1.4
CLN6-209ENST00000569336 SMR3BP02814 79 aaPredicted RBP6.33□□□□□ -1.4
CLN6-209ENST00000569336 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
CLN6-209ENST00000569336 KIAA1644Q3SXP7 199 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms