RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 SUMO2P61956 95 aaKnown RBP6.16□□□□□ -1.42
SF3B3-211ENST00000568291 HBBP68871 147 aa6.16□□□□□ -1.42
SF3B3-211ENST00000568291 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 hDV102S1A0JD36 115 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 TNFRSF6BO95407 300 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 NPYP01303 97 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 SLPIP03973 132 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 ADCYAP1P18509 176 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 XCL1P47992 114 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 HIGD2BQ4VC39 106 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 Q6ZSA8 131 aa6.15□□□□□ -1.42
SF3B3-211ENST00000568291 CHCHD10Q8WYQ3 142 aaPredicted RBP6.15□□□□□ -1.42
SF3B3-211ENST00000568291 TRAV8-4A0A0B4J246 113 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 PANO1I0J062 215 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 TCAPO15273 167 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 MT-ND4LP03901 98 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 SCXQ7RTU7 201 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 OR5A1Q8NGJ0 315 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 LINC00526Q96FQ7 95 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 TMEM101Q96IK0 257 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 BTF3L4Q96K17 158 aa6.14□□□□□ -1.43
SF3B3-211ENST00000568291 OPRPNQ99935 248 aaPredicted RBP6.14□□□□□ -1.43
SF3B3-211ENST00000568291 LOC389332A0A1B0GUA5 103 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 LINC00959A0A1B0GUT2 108 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 A0A1B0GW15 77 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 TMEM218A2RU14 115 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 C7orf77A4D0Y5 90 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-211ENST00000568291 F8W036 122 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 CCL25O15444 150 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 RPL39P62891 51 aaKnown RBP6.13□□□□□ -1.43
SF3B3-211ENST00000568291 C14orf177Q52M58 125 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 COMMD7Q86VX2 200 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 ZNF664Q8N3J9 261 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 C15orf56Q8N910 161 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 CDC42SE2Q9NRR3 84 aa6.13□□□□□ -1.43
SF3B3-211ENST00000568291 H7C423 109 aa6.12□□□□□ -1.43
SF3B3-211ENST00000568291 PPP1R2P9O14990 202 aa6.12□□□□□ -1.43
SF3B3-211ENST00000568291 PNRC1Q12796 327 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-211ENST00000568291 FOXI1Q12951 378 aa6.12□□□□□ -1.43
SF3B3-211ENST00000568291 DGAT2L7PQ6IED9 249 aa6.12□□□□□ -1.43
SF3B3-211ENST00000568291 TMEM136Q6ZRR5 245 aa6.12□□□□□ -1.43
SF3B3-211ENST00000568291 CIRBP-AS1Q8TBR5 109 aa6.12□□□□□ -1.43
SF3B3-211ENST00000568291 PRELID3AQ96N28 172 aa6.12□□□□□ -1.43
SF3B3-211ENST00000568291 KIR2DL4Q99706 377 aa6.12□□□□□ -1.43
SF3B3-211ENST00000568291 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-211ENST00000568291 TRBV24-1A0A075B6N3 115 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 TRAV13-1A0A0B4J241 112 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 LINC00862A6NCI5 91 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 S100A8P05109 93 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
SF3B3-211ENST00000568291 SDIM1Q6ZPB5 146 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 Q6ZUT4 128 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 MRPL52Q86TS9 123 aaKnown RBP6.11□□□□□ -1.43
SF3B3-211ENST00000568291 C9orf163Q8N9P6 203 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 C20orf78Q9BR46 151 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 CHAC1Q9BUX1 264 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 SMIM2Q9BVW6 85 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
SF3B3-211ENST00000568291 UBE2D4Q9Y2X8 147 aa6.11□□□□□ -1.43
SF3B3-211ENST00000568291 PPP1R17O96001 155 aa6.1□□□□□ -1.43
SF3B3-211ENST00000568291 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
SF3B3-211ENST00000568291 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
SF3B3-211ENST00000568291 ORMDL3Q8N138 153 aa6.1□□□□□ -1.43
SF3B3-211ENST00000568291 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
SF3B3-211ENST00000568291 FAM104AQ969W3 186 aa6.1□□□□□ -1.43
SF3B3-211ENST00000568291 SS18Q15532 418 aa6.09□□□□□ -1.43
SF3B3-211ENST00000568291 UQCC3Q6UW78 93 aa6.09□□□□□ -1.43
SF3B3-211ENST00000568291 ATP5L2Q7Z4Y8 100 aa6.09□□□□□ -1.43
SF3B3-211ENST00000568291 DPH3Q96FX2 82 aa6.09□□□□□ -1.43
SF3B3-211ENST00000568291 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
SF3B3-211ENST00000568291 AP5S1Q9NUS5 200 aa6.09□□□□□ -1.43
SF3B3-211ENST00000568291 DNAH8Q96JB1 4490 aa6.09□□□□□ -1.43
SF3B3-211ENST00000568291 PPBPP02775 128 aa6.08□□□□□ -1.44
SF3B3-211ENST00000568291 ZC2HC1BQ5TFG8 222 aa6.08□□□□□ -1.44
SF3B3-211ENST00000568291 C5orf38Q86SI9 138 aa6.08□□□□□ -1.44
SF3B3-211ENST00000568291 IMMP2LQ96T52 175 aa6.08□□□□□ -1.44
SF3B3-211ENST00000568291 RAB5AP20339 215 aa6.07□□□□□ -1.44
SF3B3-211ENST00000568291 KRTAP10-4P60372 401 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-211ENST00000568291 CNBPP62633 177 aaKnown RBP6.07□□□□□ -1.44
SF3B3-211ENST00000568291 RPL32P62910 135 aaKnown RBP6.07□□□□□ -1.44
SF3B3-211ENST00000568291 COX6A2Q02221 97 aa6.07□□□□□ -1.44
SF3B3-211ENST00000568291 CFAP161Q6P656 301 aa6.07□□□□□ -1.44
SF3B3-211ENST00000568291 CD164L2Q6UWJ8 174 aa6.07□□□□□ -1.44
SF3B3-211ENST00000568291 PRSS3P2Q8NHM4 247 aa6.07□□□□□ -1.44
SF3B3-211ENST00000568291 SEC11CQ9BY50 192 aa6.07□□□□□ -1.44
SF3B3-211ENST00000568291 CTDSP1Q9GZU7 261 aa6.07□□□□□ -1.44
SF3B3-211ENST00000568291 IGHV3-64A0A075B6Q5 118 aa6.06□□□□□ -1.44
SF3B3-211ENST00000568291 IGKV2-24A0A0C4DH68 120 aa6.06□□□□□ -1.44
SF3B3-211ENST00000568291 PHOX2AO14813 284 aa6.06□□□□□ -1.44
SF3B3-211ENST00000568291 SERTAD4-AS1Q5TG53 156 aa6.06□□□□□ -1.44
SF3B3-211ENST00000568291 MAP1LC3AQ9H492 121 aa6.06□□□□□ -1.44
SF3B3-211ENST00000568291 RPS10P5Q9NQ39 176 aa6.06□□□□□ -1.44
SF3B3-211ENST00000568291 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
SF3B3-211ENST00000568291 GVQW2A0A096LPI5 108 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-211ENST00000568291 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-211ENST00000568291 C1orf196B1AJZ1 125 aa6.05□□□□□ -1.44
SF3B3-211ENST00000568291 OXTP01178 125 aa6.05□□□□□ -1.44
SF3B3-211ENST00000568291 IFI27P40305 119 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms