RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 SCO1O75880 301 aa8.53□□□□□ -1.04
TSC2-220ENST00000568238 RBX1P62877 108 aa8.53□□□□□ -1.04
TSC2-220ENST00000568238 RPL32P62910 135 aaKnown RBP8.53□□□□□ -1.04
TSC2-220ENST00000568238 RMI2Q96E14 147 aa8.53□□□□□ -1.04
TSC2-220ENST00000568238 CHCHD7Q9BUK0 85 aa8.53□□□□□ -1.04
TSC2-220ENST00000568238 TRAPPC1Q9Y5R8 145 aa8.53□□□□□ -1.04
TSC2-220ENST00000568238 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
TSC2-220ENST00000568238 LECT2O14960 151 aa8.52□□□□□ -1.05
TSC2-220ENST00000568238 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.05
TSC2-220ENST00000568238 INAFM2P0DMQ5 153 aa8.52□□□□□ -1.05
TSC2-220ENST00000568238 KLK12Q9UKR0 248 aa8.52□□□□□ -1.05
TSC2-220ENST00000568238 TCAPO15273 167 aa8.51□□□□□ -1.05
TSC2-220ENST00000568238 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
TSC2-220ENST00000568238 AMMECR1LQ6DCA0 310 aa8.51□□□□□ -1.05
TSC2-220ENST00000568238 ALKBH7Q9BT30 221 aaPredicted RBP8.51□□□□□ -1.05
TSC2-220ENST00000568238 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
TSC2-220ENST00000568238 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.5□□□□□ -1.05
TSC2-220ENST00000568238 IGKV2D-24A0A075B6R9 120 aa8.5□□□□□ -1.05
TSC2-220ENST00000568238 ATP6V1G1O75348 118 aa8.5□□□□□ -1.05
TSC2-220ENST00000568238 ESDP10768 282 aa8.5□□□□□ -1.05
TSC2-220ENST00000568238 RNASEKQ6P5S7 137 aaKnown RBP8.5□□□□□ -1.05
TSC2-220ENST00000568238 CLPSL2Q6UWE3 100 aa8.5□□□□□ -1.05
TSC2-220ENST00000568238 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
TSC2-220ENST00000568238 IGLV4-60A0A075B6I1 120 aa8.49□□□□□ -1.05
TSC2-220ENST00000568238 FAM229AH3BQW9 127 aa8.49□□□□□ -1.05
TSC2-220ENST00000568238 FGF6P10767 208 aa8.49□□□□□ -1.05
TSC2-220ENST00000568238 RAB5AP20339 215 aa8.49□□□□□ -1.05
TSC2-220ENST00000568238 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
TSC2-220ENST00000568238 Q8N8P6 123 aa8.49□□□□□ -1.05
TSC2-220ENST00000568238 BAALCQ8WXS3 180 aa8.49□□□□□ -1.05
TSC2-220ENST00000568238 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
TSC2-220ENST00000568238 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
TSC2-220ENST00000568238 CRPP02741 224 aa8.48□□□□□ -1.05
TSC2-220ENST00000568238 IFI27P40305 119 aaPredicted RBP8.48□□□□□ -1.05
TSC2-220ENST00000568238 C20orf203Q8NBC4 194 aa8.48□□□□□ -1.05
TSC2-220ENST00000568238 NXT2Q9NPJ8 142 aaKnown RBP8.48□□□□□ -1.05
TSC2-220ENST00000568238 A0A1B0GUV1 79 aa8.47□□□□□ -1.05
TSC2-220ENST00000568238 H7C423 109 aa8.47□□□□□ -1.05
TSC2-220ENST00000568238 RPL39P62891 51 aaKnown RBP8.47□□□□□ -1.05
TSC2-220ENST00000568238 Q6ZSA8 131 aa8.47□□□□□ -1.05
TSC2-220ENST00000568238 TMEM101Q96IK0 257 aa8.47□□□□□ -1.05
TSC2-220ENST00000568238 COLCA2A8K830 154 aa8.46□□□□□ -1.06
TSC2-220ENST00000568238 S100A1P23297 94 aa8.46□□□□□ -1.06
TSC2-220ENST00000568238 Q0VG73 95 aa8.46□□□□□ -1.06
TSC2-220ENST00000568238 ENHOQ6UWT2 76 aa8.46□□□□□ -1.06
TSC2-220ENST00000568238 MRPL52Q86TS9 123 aaKnown RBP8.46□□□□□ -1.06
TSC2-220ENST00000568238 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.06
TSC2-220ENST00000568238 PRSS3P2Q8NHM4 247 aa8.46□□□□□ -1.06
TSC2-220ENST00000568238 C1orf43Q9BWL3 253 aa8.46□□□□□ -1.06
TSC2-220ENST00000568238 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
TSC2-220ENST00000568238 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
TSC2-220ENST00000568238 REG3AQ06141 175 aa8.45□□□□□ -1.06
TSC2-220ENST00000568238 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
TSC2-220ENST00000568238 UBE2D4Q9Y2X8 147 aa8.45□□□□□ -1.06
TSC2-220ENST00000568238 TRGC2P03986 189 aa8.44□□□□□ -1.06
TSC2-220ENST00000568238 ORMDL2Q53FV1 153 aa8.44□□□□□ -1.06
TSC2-220ENST00000568238 DGAT2L7PQ6IED9 249 aa8.44□□□□□ -1.06
TSC2-220ENST00000568238 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
TSC2-220ENST00000568238 C18orf32Q8TCD1 76 aa8.44□□□□□ -1.06
TSC2-220ENST00000568238 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
TSC2-220ENST00000568238 IGLV10-54A0A075B6I4 117 aa8.43□□□□□ -1.06
TSC2-220ENST00000568238 SMAGPQ0VAQ4 97 aa8.43□□□□□ -1.06
TSC2-220ENST00000568238 MIAQ16674 131 aa8.43□□□□□ -1.06
TSC2-220ENST00000568238 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
TSC2-220ENST00000568238 C14orf177Q52M58 125 aa8.43□□□□□ -1.06
TSC2-220ENST00000568238 RNASE13Q5GAN3 156 aaKnown RBP8.43□□□□□ -1.06
TSC2-220ENST00000568238 Q6ZUT4 128 aa8.43□□□□□ -1.06
TSC2-220ENST00000568238 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
TSC2-220ENST00000568238 K7EMI3 77 aa8.42□□□□□ -1.06
TSC2-220ENST00000568238 C2orf66Q6UXQ4 117 aa8.42□□□□□ -1.06
TSC2-220ENST00000568238 LINC00528Q8N1L1 170 aa8.42□□□□□ -1.06
TSC2-220ENST00000568238 CDC42SE2Q9NRR3 84 aa8.42□□□□□ -1.06
TSC2-220ENST00000568238 SPANXA1Q9NS26 97 aa8.42□□□□□ -1.06
TSC2-220ENST00000568238 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
TSC2-220ENST00000568238 ZNF664Q8N3J9 261 aa8.41□□□□□ -1.06
TSC2-220ENST00000568238 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
TSC2-220ENST00000568238 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
TSC2-220ENST00000568238 CYSLTR1Q9Y271 337 aa8.41□□□□□ -1.06
TSC2-220ENST00000568238 PLA2G1BP04054 148 aaKnown RBP8.4□□□□□ -1.06
TSC2-220ENST00000568238 CSDC2Q9Y534 153 aaKnown RBP8.4□□□□□ -1.06
TSC2-220ENST00000568238 LINC01546A6NGU7 62 aa8.39□□□□□ -1.07
TSC2-220ENST00000568238 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
TSC2-220ENST00000568238 CHAC1Q9BUX1 264 aa8.39□□□□□ -1.07
TSC2-220ENST00000568238 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
TSC2-220ENST00000568238 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
TSC2-220ENST00000568238 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
TSC2-220ENST00000568238 USP17L23D6RBM5 183 aa8.38□□□□□ -1.07
TSC2-220ENST00000568238 LINC00614P0C842 121 aa8.38□□□□□ -1.07
TSC2-220ENST00000568238 CHCHD10Q8WYQ3 142 aaPredicted RBP8.38□□□□□ -1.07
TSC2-220ENST00000568238 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
TSC2-220ENST00000568238 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
TSC2-220ENST00000568238 TRAV13-1A0A0B4J241 112 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 LINC00959A0A1B0GUT2 108 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 GAGE12HA6NDE8 117 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 IFITM10A6NMD0 228 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 G0S2P27469 103 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 XCL1P47992 114 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 RAB5BP61020 215 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 MRPS36P82909 103 aaKnown RBP8.37□□□□□ -1.07
TSC2-220ENST00000568238 PMCHL1Q16048 86 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms