RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 OR5A1Q8NGJ0 315 aa7.76□□□□□ -1.17
GTF3C1-208ENST00000567843 MRAP2Q96G30 205 aa7.76□□□□□ -1.17
GTF3C1-208ENST00000567843 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 OXTP01178 125 aa7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 POLR2KP53803 58 aaKnown RBP7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 RPL23P62829 140 aaKnown RBP7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 SRSF3P84103 164 aaKnown RBP7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 RIGQ13278 110 aa7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 ADIRFQ15847 76 aa7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 TMEM241Q24JQ0 296 aa7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 MAJINQ3KP22 176 aa7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 SPACA4Q8TDM5 124 aa7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 ISOC2Q96AB3 205 aa7.75□□□□□ -1.17
GTF3C1-208ENST00000567843 ZNF25P17030 456 aaPredicted RBP7.74□□□□□ -1.17
GTF3C1-208ENST00000567843 RNASE13Q5GAN3 156 aaKnown RBP7.74□□□□□ -1.17
GTF3C1-208ENST00000567843 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
GTF3C1-208ENST00000567843 GVQW2A0A096LPI5 108 aaPredicted RBP7.73□□□□□ -1.17
GTF3C1-208ENST00000567843 C7orf77A4D0Y5 90 aa7.73□□□□□ -1.17
GTF3C1-208ENST00000567843 FCER1GP30273 86 aa7.73□□□□□ -1.17
GTF3C1-208ENST00000567843 CAMPP49913 170 aa7.73□□□□□ -1.17
GTF3C1-208ENST00000567843 ZNF664Q8N3J9 261 aa7.73□□□□□ -1.17
GTF3C1-208ENST00000567843 CDC42SE2Q9NRR3 84 aa7.73□□□□□ -1.17
GTF3C1-208ENST00000567843 A0A096LNI7 61 aa7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 TRBV27A0A0K0K1C4 114 aa7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 VCYO14598 125 aa7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 PHOX2AO14813 284 aa7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 NDUFS6O75380 124 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 SS18Q15532 418 aa7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 MRPL51Q4U2R6 128 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 NRACQ8N912 160 aa7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 NAT8BQ9UHF3 227 aa7.72□□□□□ -1.17
GTF3C1-208ENST00000567843 SUMO2P61956 95 aaKnown RBP7.71□□□□□ -1.18
GTF3C1-208ENST00000567843 MRPL52Q86TS9 123 aaKnown RBP7.71□□□□□ -1.18
GTF3C1-208ENST00000567843 STPG4Q8N801 248 aa7.71□□□□□ -1.18
GTF3C1-208ENST00000567843 PLAC8Q9NZF1 115 aa7.71□□□□□ -1.18
GTF3C1-208ENST00000567843 NAT8Q9UHE5 227 aa7.71□□□□□ -1.18
GTF3C1-208ENST00000567843 IGHV1-58A0A0C4DH39 117 aa7.7□□□□□ -1.18
GTF3C1-208ENST00000567843 FAM74A3Q4VXF1 159 aa7.7□□□□□ -1.18
GTF3C1-208ENST00000567843 FAM104BQ5XKR9 115 aa7.7□□□□□ -1.18
GTF3C1-208ENST00000567843 MRPL54Q6P161 138 aaKnown RBP7.7□□□□□ -1.18
GTF3C1-208ENST00000567843 TRAV13-1A0A0B4J241 112 aa7.69□□□□□ -1.18
GTF3C1-208ENST00000567843 PEA15Q15121 130 aa7.69□□□□□ -1.18
GTF3C1-208ENST00000567843 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
GTF3C1-208ENST00000567843 CD164L2Q6UWJ8 174 aa7.69□□□□□ -1.18
GTF3C1-208ENST00000567843 Q6ZUT4 128 aa7.69□□□□□ -1.18
GTF3C1-208ENST00000567843 C7orf33Q8WU49 177 aa7.69□□□□□ -1.18
GTF3C1-208ENST00000567843 CARD19Q96LW7 228 aa7.69□□□□□ -1.18
GTF3C1-208ENST00000567843 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
GTF3C1-208ENST00000567843 SMIM27A0A1W2PRY6 76 aa7.68□□□□□ -1.18
GTF3C1-208ENST00000567843 ZNF561-AS1K7EIQ3 104 aa7.68□□□□□ -1.18
GTF3C1-208ENST00000567843 CKS2P33552 79 aa7.68□□□□□ -1.18
GTF3C1-208ENST00000567843 SYCNQ0VAF6 134 aa7.68□□□□□ -1.18
GTF3C1-208ENST00000567843 C5orf38Q86SI9 138 aa7.68□□□□□ -1.18
GTF3C1-208ENST00000567843 UBE2D4Q9Y2X8 147 aa7.68□□□□□ -1.18
GTF3C1-208ENST00000567843 IGLV4-69A0A075B6H9 119 aa7.67□□□□□ -1.18
GTF3C1-208ENST00000567843 PPP1R17O96001 155 aa7.67□□□□□ -1.18
GTF3C1-208ENST00000567843 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
GTF3C1-208ENST00000567843 MALP21145 153 aa7.67□□□□□ -1.18
GTF3C1-208ENST00000567843 RPL39P62891 51 aaKnown RBP7.67□□□□□ -1.18
GTF3C1-208ENST00000567843 C1orf196B1AJZ1 125 aa7.66□□□□□ -1.18
GTF3C1-208ENST00000567843 COX7A2LO14548 114 aa7.66□□□□□ -1.18
GTF3C1-208ENST00000567843 TNFRSF6BO95407 300 aa7.66□□□□□ -1.18
GTF3C1-208ENST00000567843 GAGE2BQ13066 116 aa7.66□□□□□ -1.18
GTF3C1-208ENST00000567843 Q6ZRU5 148 aa7.66□□□□□ -1.18
GTF3C1-208ENST00000567843 OPRPNQ99935 248 aaPredicted RBP7.66□□□□□ -1.18
GTF3C1-208ENST00000567843 PLA2G2DQ9UNK4 145 aa7.66□□□□□ -1.18
GTF3C1-208ENST00000567843 TNXBP22105 4242 aa7.66□□□□□ -1.18
GTF3C1-208ENST00000567843 D6R8Y8 96 aa7.65□□□□□ -1.18
GTF3C1-208ENST00000567843 PPP1R2P9O14990 202 aa7.65□□□□□ -1.18
GTF3C1-208ENST00000567843 TCAPO15273 167 aa7.65□□□□□ -1.18
GTF3C1-208ENST00000567843 NPYP01303 97 aa7.65□□□□□ -1.18
GTF3C1-208ENST00000567843 PRR3P79522 188 aaKnown RBP7.64□□□□□ -1.19
GTF3C1-208ENST00000567843 CAMK2N2Q96S95 79 aa7.64□□□□□ -1.19
GTF3C1-208ENST00000567843 C20orf78Q9BR46 151 aa7.64□□□□□ -1.19
GTF3C1-208ENST00000567843 TRBV24-1A0A075B6N3 115 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 A0A1B0GW15 77 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 LINC00862A6NCI5 91 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 HBBP68871 147 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 SMAGPQ0VAQ4 97 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 ODF1Q14990 250 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 TMEM18Q96B42 140 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 SMIM2Q9BVW6 85 aa7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 CSDC2Q9Y534 153 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-208ENST00000567843 A0A1B0GXF2 115 aa7.62□□□□□ -1.19
GTF3C1-208ENST00000567843 PTTG1IPP53801 180 aa7.62□□□□□ -1.19
GTF3C1-208ENST00000567843 FAM104AQ969W3 186 aa7.62□□□□□ -1.19
GTF3C1-208ENST00000567843 LINC00474Q9P2X8 69 aa7.62□□□□□ -1.19
GTF3C1-208ENST00000567843 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
GTF3C1-208ENST00000567843 A0A1W2PNN7 141 aa7.61□□□□□ -1.19
GTF3C1-208ENST00000567843 F8W036 122 aa7.61□□□□□ -1.19
GTF3C1-208ENST00000567843 S100A8P05109 93 aa7.61□□□□□ -1.19
GTF3C1-208ENST00000567843 SPAG11BQ08648 103 aa7.61□□□□□ -1.19
GTF3C1-208ENST00000567843 TIMM21Q9BVV7 248 aa7.61□□□□□ -1.19
GTF3C1-208ENST00000567843 SMDT1Q9H4I9 107 aa7.61□□□□□ -1.19
GTF3C1-208ENST00000567843 LOC389332A0A1B0GUA5 103 aa7.6□□□□□ -1.19
GTF3C1-208ENST00000567843 IFITM10A6NMD0 228 aa7.6□□□□□ -1.19
GTF3C1-208ENST00000567843 RPL32P62910 135 aaKnown RBP7.6□□□□□ -1.19
GTF3C1-208ENST00000567843 RPL18AQ02543 176 aaKnown RBP7.6□□□□□ -1.19
GTF3C1-208ENST00000567843 TMEM136Q6ZRR5 245 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms