RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 SUMO2P61956 95 aaKnown RBP4.63□□□□□ -1.67
SMPD3-210ENST00000567811 CNBPP62633 177 aaKnown RBP4.63□□□□□ -1.67
SMPD3-210ENST00000567811 SS18Q15532 418 aa4.63□□□□□ -1.67
SMPD3-210ENST00000567811 ZNF664Q8N3J9 261 aa4.63□□□□□ -1.67
SMPD3-210ENST00000567811 NRACQ8N912 160 aa4.63□□□□□ -1.67
SMPD3-210ENST00000567811 KIR2DL4Q99706 377 aa4.63□□□□□ -1.67
SMPD3-210ENST00000567811 CDC42SE2Q9NRR3 84 aa4.63□□□□□ -1.67
SMPD3-210ENST00000567811 TMEM242Q9NWH2 141 aa4.63□□□□□ -1.67
SMPD3-210ENST00000567811 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
SMPD3-210ENST00000567811 TRBV24-1A0A075B6N3 115 aa4.62□□□□□ -1.67
SMPD3-210ENST00000567811 IGHV3-64A0A075B6Q5 118 aa4.62□□□□□ -1.67
SMPD3-210ENST00000567811 LINC00959A0A1B0GUT2 108 aa4.62□□□□□ -1.67
SMPD3-210ENST00000567811 C7orf77A4D0Y5 90 aa4.62□□□□□ -1.67
SMPD3-210ENST00000567811 F8W036 122 aa4.62□□□□□ -1.67
SMPD3-210ENST00000567811 SMAGPQ0VAQ4 97 aa4.62□□□□□ -1.67
SMPD3-210ENST00000567811 MRPL52Q86TS9 123 aaKnown RBP4.62□□□□□ -1.67
SMPD3-210ENST00000567811 C20orf78Q9BR46 151 aa4.62□□□□□ -1.67
SMPD3-210ENST00000567811 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
SMPD3-210ENST00000567811 CCL25O15444 150 aa4.61□□□□□ -1.67
SMPD3-210ENST00000567811 TNFRSF6BO95407 300 aa4.61□□□□□ -1.67
SMPD3-210ENST00000567811 HBBP68871 147 aa4.61□□□□□ -1.67
SMPD3-210ENST00000567811 MRPL54Q6P161 138 aaKnown RBP4.61□□□□□ -1.67
SMPD3-210ENST00000567811 TMEM18Q96B42 140 aa4.61□□□□□ -1.67
SMPD3-210ENST00000567811 ANAPC16Q96DE5 110 aa4.61□□□□□ -1.67
SMPD3-210ENST00000567811 C1orf196B1AJZ1 125 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 TCAPO15273 167 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 PPBPP02775 128 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 MT-ND4LP03901 98 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 XCL1P47992 114 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 RPL32P62910 135 aaKnown RBP4.6□□□□□ -1.67
SMPD3-210ENST00000567811 PNRC1Q12796 327 aaPredicted RBP4.6□□□□□ -1.67
SMPD3-210ENST00000567811 FOXI1Q12951 378 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 HIGD2BQ4VC39 106 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 CD164L2Q6UWJ8 174 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 TMEM136Q6ZRR5 245 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 C15orf56Q8N910 161 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 TIMM21Q9BVV7 248 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.6□□□□□ -1.67
SMPD3-210ENST00000567811 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
SMPD3-210ENST00000567811 GVQW2A0A096LPI5 108 aaPredicted RBP4.59□□□□□ -1.67
SMPD3-210ENST00000567811 IGHV1-58A0A0C4DH39 117 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 A0A1B0GXF2 115 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 D6R8Y8 96 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 PANO1I0J062 215 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 PHOX2AO14813 284 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 COX6A2Q02221 97 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 ATP5L2Q7Z4Y8 100 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 PRSS3P2Q8NHM4 247 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 UBE2D4Q9Y2X8 147 aa4.59□□□□□ -1.67
SMPD3-210ENST00000567811 A0A087WYN8 130 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 PRSS47A8MTI9 375 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 J3QL48 77 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 ZNF561-AS1K7EIQ3 104 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 NPYP01303 97 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 RAB5AP20339 215 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 MALP21145 153 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 CIRBPQ14011 172 aaKnown RBP4.58□□□□□ -1.68
SMPD3-210ENST00000567811 CLLU1Q5K131 121 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 ORMDL3Q8N138 153 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 PRELID3AQ96N28 172 aa4.58□□□□□ -1.68
SMPD3-210ENST00000567811 TRAV13-1A0A0B4J241 112 aa4.57□□□□□ -1.68
SMPD3-210ENST00000567811 KRTAP29-1A8MX34 341 aaPredicted RBP4.57□□□□□ -1.68
SMPD3-210ENST00000567811 CHTF8P0CG12 524 aa4.57□□□□□ -1.68
SMPD3-210ENST00000567811 KRTAP10-4P60372 401 aaPredicted RBP4.57□□□□□ -1.68
SMPD3-210ENST00000567811 RPL37AP61513 92 aaKnown RBP4.57□□□□□ -1.68
SMPD3-210ENST00000567811 RPL39P62891 51 aaKnown RBP4.57□□□□□ -1.68
SMPD3-210ENST00000567811 RNASE13Q5GAN3 156 aaKnown RBP4.57□□□□□ -1.68
SMPD3-210ENST00000567811 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
SMPD3-210ENST00000567811 SMIM2Q9BVW6 85 aa4.57□□□□□ -1.68
SMPD3-210ENST00000567811 LOC389332A0A1B0GUA5 103 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 COX7A2LO14548 114 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 APOMO95445 188 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 MRPS36P82909 103 aaKnown RBP4.56□□□□□ -1.68
SMPD3-210ENST00000567811 IFITM2Q01629 132 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 MAJINQ3KP22 176 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 UQCC3Q6UW78 93 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 C5orf38Q86SI9 138 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 IMMP2LQ96T52 175 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 OPRPNQ99935 248 aaPredicted RBP4.56□□□□□ -1.68
SMPD3-210ENST00000567811 SPANXA1Q9NS26 97 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 PLAC8Q9NZF1 115 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 PKIGQ9Y2B9 76 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 LAMTOR2Q9Y2Q5 125 aa4.56□□□□□ -1.68
SMPD3-210ENST00000567811 DMBT1Q9UGM3 2413 aaPredicted RBP4.56□□□□□ -1.68
SMPD3-210ENST00000567811 IGLV4-69A0A075B6H9 119 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 IGKV2-24A0A0C4DH68 120 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 TMEM218A2RU14 115 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 OXTP01178 125 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 STPG4Q8N801 248 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 SPACA4Q8TDM5 124 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 FAM104AQ969W3 186 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 CARD19Q96LW7 228 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 MAP1LC3AQ9H492 121 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 LINC00474Q9P2X8 69 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 PYGO1Q9Y3Y4 419 aa4.55□□□□□ -1.68
SMPD3-210ENST00000567811 IFI27P40305 119 aaPredicted RBP4.54□□□□□ -1.68
SMPD3-210ENST00000567811 Q6ZUT4 128 aa4.54□□□□□ -1.68
SMPD3-210ENST00000567811 Q8N8P6 123 aa4.54□□□□□ -1.68
SMPD3-210ENST00000567811 C2orf48Q96LS8 159 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms