RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.19□□□□□ -0.14
NME3-210ENST00000567271 IGKV3OR2-268A0A0C4DH90 116 aa14.19□□□□□ -0.14
NME3-210ENST00000567271 USP17L23D6RBM5 183 aa14.19□□□□□ -0.14
NME3-210ENST00000567271 TCAPO15273 167 aa14.19□□□□□ -0.14
NME3-210ENST00000567271 S100PP25815 95 aa14.18□□□□□ -0.14
NME3-210ENST00000567271 C14orf177Q52M58 125 aa14.18□□□□□ -0.14
NME3-210ENST00000567271 CDC42SE2Q9NRR3 84 aa14.18□□□□□ -0.14
NME3-210ENST00000567271 LAMTOR2Q9Y2Q5 125 aa14.18□□□□□ -0.14
NME3-210ENST00000567271 PRSS47A8MTI9 375 aa14.17□□□□□ -0.14
NME3-210ENST00000567271 RPS10P5Q9NQ39 176 aa14.17□□□□□ -0.14
NME3-210ENST00000567271 UBE2D4Q9Y2X8 147 aa14.16□□□□□ -0.14
NME3-210ENST00000567271 APOC3P02656 99 aa14.15□□□□□ -0.14
NME3-210ENST00000567271 SMAGPQ0VAQ4 97 aa14.15□□□□□ -0.14
NME3-210ENST00000567271 DGAT2L7PQ6IED9 249 aa14.15□□□□□ -0.14
NME3-210ENST00000567271 ZNF664Q8N3J9 261 aa14.15□□□□□ -0.14
NME3-210ENST00000567271 TMEM18Q96B42 140 aa14.15□□□□□ -0.14
NME3-210ENST00000567271 CSDC2Q9Y534 153 aaKnown RBP14.15□□□□□ -0.14
NME3-210ENST00000567271 CHCHD10Q8WYQ3 142 aaPredicted RBP14.14□□□□□ -0.15
NME3-210ENST00000567271 GAGE12HA6NDE8 117 aa14.13□□□□□ -0.15
NME3-210ENST00000567271 TIMM21Q9BVV7 248 aa14.13□□□□□ -0.15
NME3-210ENST00000567271 MAP1LC3AQ9H492 121 aa14.13□□□□□ -0.15
NME3-210ENST00000567271 ABCA13Q86UQ4 5058 aa14.13□□□□□ -0.15
NME3-210ENST00000567271 LOC389332A0A1B0GUA5 103 aa14.12□□□□□ -0.15
NME3-210ENST00000567271 LINC00959A0A1B0GUT2 108 aa14.12□□□□□ -0.15
NME3-210ENST00000567271 PRSS1P07477 247 aa14.12□□□□□ -0.15
NME3-210ENST00000567271 RAB5AP20339 215 aa14.12□□□□□ -0.15
NME3-210ENST00000567271 NDUFA5Q16718 116 aa14.12□□□□□ -0.15
NME3-210ENST00000567271 XGP55808 180 aa14.11□□□□□ -0.15
NME3-210ENST00000567271 RPL39P62891 51 aaKnown RBP14.11□□□□□ -0.15
NME3-210ENST00000567271 SVBPQ8N300 66 aa14.11□□□□□ -0.15
NME3-210ENST00000567271 GNB1LQ9BYB4 327 aa14.11□□□□□ -0.15
NME3-210ENST00000567271 Q8N8P6 123 aa14.1□□□□□ -0.15
NME3-210ENST00000567271 FAT1Q14517 4588 aa14.1□□□□□ -0.15
NME3-210ENST00000567271 SNAPINO95295 136 aa14.09□□□□□ -0.15
NME3-210ENST00000567271 KIAA1644Q3SXP7 199 aa14.09□□□□□ -0.15
NME3-210ENST00000567271 COX19Q49B96 90 aa14.09□□□□□ -0.15
NME3-210ENST00000567271 PCLOQ9Y6V0 5065 aa14.09□□□□□ -0.15
NME3-210ENST00000567271 SS18Q15532 418 aa14.08□□□□□ -0.16
NME3-210ENST00000567271 LINC01620Q4KN68 170 aa14.08□□□□□ -0.16
NME3-210ENST00000567271 KRTAP17-1Q9BYP8 105 aa14.08□□□□□ -0.16
NME3-210ENST00000567271 CCL25O15444 150 aa14.07□□□□□ -0.16
NME3-210ENST00000567271 XCL1P47992 114 aa14.07□□□□□ -0.16
NME3-210ENST00000567271 FOXI1Q12951 378 aa14.07□□□□□ -0.16
NME3-210ENST00000567271 RNASE13Q5GAN3 156 aaKnown RBP14.07□□□□□ -0.16
NME3-210ENST00000567271 Q6ZUT4 128 aa14.07□□□□□ -0.16
NME3-210ENST00000567271 SPANXA1Q9NS26 97 aa14.07□□□□□ -0.16
NME3-210ENST00000567271 FAM104AQ969W3 186 aa14.06□□□□□ -0.16
NME3-210ENST00000567271 FAM30AQ9NZY2 134 aa14.06□□□□□ -0.16
NME3-210ENST00000567271 hDV102S1A0JD36 115 aa14.05□□□□□ -0.16
NME3-210ENST00000567271 CFAP161Q6P656 301 aa14.05□□□□□ -0.16
NME3-210ENST00000567271 C15orf56Q8N910 161 aa14.05□□□□□ -0.16
NME3-210ENST00000567271 C1orf196B1AJZ1 125 aa14.04□□□□□ -0.16
NME3-210ENST00000567271 K7EMI3 77 aa14.04□□□□□ -0.16
NME3-210ENST00000567271 MT-ND6P03923 174 aa14.04□□□□□ -0.16
NME3-210ENST00000567271 CD164L2Q6UWJ8 174 aa14.04□□□□□ -0.16
NME3-210ENST00000567271 NXT2Q9NPJ8 142 aaKnown RBP14.04□□□□□ -0.16
NME3-210ENST00000567271 TGIF2-C20orf24A0A0A6YYL0 155 aa14.03□□□□□ -0.16
NME3-210ENST00000567271 IFI27P40305 119 aaPredicted RBP14.03□□□□□ -0.16
NME3-210ENST00000567271 MRPS36P82909 103 aaKnown RBP14.03□□□□□ -0.16
NME3-210ENST00000567271 Q6ZSA8 131 aa14.03□□□□□ -0.16
NME3-210ENST00000567271 OPRPNQ99935 248 aaPredicted RBP14.03□□□□□ -0.16
NME3-210ENST00000567271 MRPL18Q9H0U6 180 aaKnown RBP14.03□□□□□ -0.16
NME3-210ENST00000567271 TRAV13-1A0A0B4J241 112 aa14.02□□□□□ -0.17
NME3-210ENST00000567271 CNBPP62633 177 aaKnown RBP14.02□□□□□ -0.17
NME3-210ENST00000567271 ORMDL2Q53FV1 153 aa14.02□□□□□ -0.17
NME3-210ENST00000567271 Q8N1X5 172 aa14.02□□□□□ -0.17
NME3-210ENST00000567271 C9orf163Q8N9P6 203 aa14.02□□□□□ -0.17
NME3-210ENST00000567271 ALKBH7Q9BT30 221 aaPredicted RBP14.02□□□□□ -0.17
NME3-210ENST00000567271 PYGO1Q9Y3Y4 419 aa14.02□□□□□ -0.17
NME3-210ENST00000567271 FABP9Q0Z7S8 132 aa14.01□□□□□ -0.17
NME3-210ENST00000567271 SLPIP03973 132 aa14□□□□□ -0.17
NME3-210ENST00000567271 HAMPP81172 84 aa14□□□□□ -0.17
NME3-210ENST00000567271 C2orf66Q6UXQ4 117 aa14□□□□□ -0.17
NME3-210ENST00000567271 SLC7A5P1Q8MH63 180 aa14□□□□□ -0.17
NME3-210ENST00000567271 AP5S1Q9NUS5 200 aa14□□□□□ -0.17
NME3-210ENST00000567271 CYSLTR1Q9Y271 337 aa13.99□□□□□ -0.17
NME3-210ENST00000567271 GVQW2A0A096LPI5 108 aaPredicted RBP13.98□□□□□ -0.17
NME3-210ENST00000567271 HIGD2BQ4VC39 106 aa13.98□□□□□ -0.17
NME3-210ENST00000567271 KRTAP4-5Q9BYR2 181 aa13.98□□□□□ -0.17
NME3-210ENST00000567271 IGLV4-3A0A075B6K6 122 aa13.97□□□□□ -0.17
NME3-210ENST00000567271 IGHV1-58A0A0C4DH39 117 aa13.97□□□□□ -0.17
NME3-210ENST00000567271 PRSS3P2Q8NHM4 247 aa13.97□□□□□ -0.17
NME3-210ENST00000567271 TRAPPC1Q9Y5R8 145 aa13.97□□□□□ -0.17
NME3-210ENST00000567271 YPEL4Q96NS1 127 aa13.96□□□□□ -0.17
NME3-210ENST00000567271 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.95□□□□□ -0.18
NME3-210ENST00000567271 IFITM10A6NMD0 228 aa13.95□□□□□ -0.18
NME3-210ENST00000567271 COX7A2LO14548 114 aa13.95□□□□□ -0.18
NME3-210ENST00000567271 G0S2P27469 103 aa13.95□□□□□ -0.18
NME3-210ENST00000567271 TMEM141Q96I45 108 aa13.95□□□□□ -0.18
NME3-210ENST00000567271 LINC01546A6NGU7 62 aa13.94□□□□□ -0.18
NME3-210ENST00000567271 SDIM1Q6ZPB5 146 aa13.94□□□□□ -0.18
NME3-210ENST00000567271 VPS13BQ7Z7G8 4022 aa13.93□□□□□ -0.18
NME3-210ENST00000567271 IGIPA6NJ69 53 aa13.93□□□□□ -0.18
NME3-210ENST00000567271 SMR3BP02814 79 aaPredicted RBP13.93□□□□□ -0.18
NME3-210ENST00000567271 NPSP0C0P6 89 aa13.93□□□□□ -0.18
NME3-210ENST00000567271 MALP21145 153 aa13.93□□□□□ -0.18
NME3-210ENST00000567271 C5orf38Q86SI9 138 aa13.92□□□□□ -0.18
NME3-210ENST00000567271 TOMM6Q96B49 74 aa13.92□□□□□ -0.18
NME3-210ENST00000567271 CHAC1Q9BUX1 264 aa13.92□□□□□ -0.18
NME3-210ENST00000567271 IGHV3-64A0A075B6Q5 118 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms