RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 BTF3L4Q96K17 158 aa9.45□□□□□ -0.9
PALB2-205ENST00000567003 RNASE7Q9H1E1 156 aaKnown RBP9.45□□□□□ -0.9
PALB2-205ENST00000567003 MED9Q9NWA0 146 aa9.45□□□□□ -0.9
PALB2-205ENST00000567003 TMEM242Q9NWH2 141 aa9.45□□□□□ -0.9
PALB2-205ENST00000567003 IGLV4-69A0A075B6H9 119 aa9.44□□□□□ -0.9
PALB2-205ENST00000567003 KANTRA0A1W2PQU2 76 aa9.44□□□□□ -0.9
PALB2-205ENST00000567003 TSHBP01222 138 aa9.44□□□□□ -0.9
PALB2-205ENST00000567003 ZNF25P17030 456 aaPredicted RBP9.44□□□□□ -0.9
PALB2-205ENST00000567003 PMCHP20382 165 aa9.44□□□□□ -0.9
PALB2-205ENST00000567003 C1orf137Q5JT78 98 aa9.44□□□□□ -0.9
PALB2-205ENST00000567003 PHF5AQ7RTV0 110 aaKnown RBP9.44□□□□□ -0.9
PALB2-205ENST00000567003 SMIM12Q96EX1 92 aa9.44□□□□□ -0.9
PALB2-205ENST00000567003 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
PALB2-205ENST00000567003 SS18Q15532 418 aa9.43□□□□□ -0.9
PALB2-205ENST00000567003 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
PALB2-205ENST00000567003 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
PALB2-205ENST00000567003 ANAPC16Q96DE5 110 aa9.43□□□□□ -0.9
PALB2-205ENST00000567003 I3L3M4 83 aa9.42□□□□□ -0.9
PALB2-205ENST00000567003 K7EN84 100 aa9.42□□□□□ -0.9
PALB2-205ENST00000567003 ESDP10768 282 aa9.42□□□□□ -0.9
PALB2-205ENST00000567003 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
PALB2-205ENST00000567003 CDC42SE2Q9NRR3 84 aa9.42□□□□□ -0.9
PALB2-205ENST00000567003 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
PALB2-205ENST00000567003 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
PALB2-205ENST00000567003 RPL18AQ02543 176 aaKnown RBP9.41□□□□□ -0.9
PALB2-205ENST00000567003 ZNF664Q8N3J9 261 aa9.41□□□□□ -0.9
PALB2-205ENST00000567003 NUP35Q8NFH5 326 aa9.41□□□□□ -0.9
PALB2-205ENST00000567003 BIN3Q9NQY0 253 aa9.41□□□□□ -0.9
PALB2-205ENST00000567003 HMSDA8MTL9 139 aa9.4□□□□□ -0.9
PALB2-205ENST00000567003 PDE6DO43924 150 aa9.4□□□□□ -0.9
PALB2-205ENST00000567003 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.9
PALB2-205ENST00000567003 SMIM15Q7Z3B0 74 aa9.4□□□□□ -0.9
PALB2-205ENST00000567003 ISOC2Q96AB3 205 aa9.4□□□□□ -0.9
PALB2-205ENST00000567003 MRAP2Q96G30 205 aa9.4□□□□□ -0.9
PALB2-205ENST00000567003 CAMK2N2Q96S95 79 aa9.4□□□□□ -0.9
PALB2-205ENST00000567003 OPRPNQ99935 248 aaPredicted RBP9.4□□□□□ -0.9
PALB2-205ENST00000567003 MALP21145 153 aa9.39□□□□□ -0.91
PALB2-205ENST00000567003 EIF5AP63241 154 aaKnown RBP9.39□□□□□ -0.91
PALB2-205ENST00000567003 EIF5AL1Q6IS14 154 aaKnown RBP9.39□□□□□ -0.91
PALB2-205ENST00000567003 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
PALB2-205ENST00000567003 COX7A2LO14548 114 aa9.38□□□□□ -0.91
PALB2-205ENST00000567003 APOMO95445 188 aa9.38□□□□□ -0.91
PALB2-205ENST00000567003 MRPL52Q86TS9 123 aaKnown RBP9.38□□□□□ -0.91
PALB2-205ENST00000567003 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
PALB2-205ENST00000567003 OCC1Q8TAD7 63 aa9.38□□□□□ -0.91
PALB2-205ENST00000567003 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
PALB2-205ENST00000567003 IGLV7-43P04211 117 aa9.37□□□□□ -0.91
PALB2-205ENST00000567003 TEX261Q6UWH6 196 aa9.37□□□□□ -0.91
PALB2-205ENST00000567003 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
PALB2-205ENST00000567003 KRTAP9-2Q9BYQ4 174 aa9.37□□□□□ -0.91
PALB2-205ENST00000567003 C7orf77A4D0Y5 90 aa9.36□□□□□ -0.91
PALB2-205ENST00000567003 DIRC1Q969H9 104 aa9.36□□□□□ -0.91
PALB2-205ENST00000567003 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
PALB2-205ENST00000567003 TEX46H3BTG2 121 aa9.35□□□□□ -0.91
PALB2-205ENST00000567003 RGS21Q2M5E4 152 aa9.35□□□□□ -0.91
PALB2-205ENST00000567003 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
PALB2-205ENST00000567003 H0Y9J4 135 aa9.34□□□□□ -0.91
PALB2-205ENST00000567003 GATCO43716 136 aaKnown RBP9.34□□□□□ -0.91
PALB2-205ENST00000567003 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
PALB2-205ENST00000567003 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
PALB2-205ENST00000567003 PRR4Q16378 134 aa9.34□□□□□ -0.91
PALB2-205ENST00000567003 C2orf48Q96LS8 159 aa9.34□□□□□ -0.91
PALB2-205ENST00000567003 A0A087WZ39 114 aa9.33□□□□□ -0.92
PALB2-205ENST00000567003 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
PALB2-205ENST00000567003 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
PALB2-205ENST00000567003 Q6ZUT4 128 aa9.33□□□□□ -0.92
PALB2-205ENST00000567003 FAT4Q6V0I7 4981 aa9.33□□□□□ -0.92
PALB2-205ENST00000567003 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
PALB2-205ENST00000567003 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
PALB2-205ENST00000567003 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
PALB2-205ENST00000567003 UBE2D4Q9Y2X8 147 aa9.31□□□□□ -0.92
PALB2-205ENST00000567003 FCER1GP30273 86 aa9.3□□□□□ -0.92
PALB2-205ENST00000567003 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
PALB2-205ENST00000567003 AMN1Q8IY45 258 aa9.3□□□□□ -0.92
PALB2-205ENST00000567003 BATF3Q9NR55 127 aa9.3□□□□□ -0.92
PALB2-205ENST00000567003 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
PALB2-205ENST00000567003 A8MWL6 223 aa9.29□□□□□ -0.92
PALB2-205ENST00000567003 RAB4AP20338 218 aa9.29□□□□□ -0.92
PALB2-205ENST00000567003 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
PALB2-205ENST00000567003 RNF151Q2KHN1 245 aa9.28□□□□□ -0.92
PALB2-205ENST00000567003 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
PALB2-205ENST00000567003 ORAOV1Q8WV07 137 aa9.28□□□□□ -0.92
PALB2-205ENST00000567003 BORCS7Q96B45 105 aa9.28□□□□□ -0.92
PALB2-205ENST00000567003 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
PALB2-205ENST00000567003 FAM231DQ6ZW35 169 aa9.27□□□□□ -0.93
PALB2-205ENST00000567003 CSDC2Q9Y534 153 aaKnown RBP9.27□□□□□ -0.93
PALB2-205ENST00000567003 A0A1B0GUT8 65 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 HIGD1CA8MV81 97 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 VCYO14598 125 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 UBE2D1P51668 147 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 CEBPGP53567 150 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 GAGE2EQ4V326 116 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 UNQ6190/PRO20217Q6UXQ8 127 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 NRACQ8N912 160 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 OR10D4PQ8NGN7 298 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 MRPL35Q9NZE8 188 aaKnown RBP9.26□□□□□ -0.93
PALB2-205ENST00000567003 GAGE2DQ9UEU5 116 aa9.26□□□□□ -0.93
PALB2-205ENST00000567003 CT83Q5H943 113 aa9.25□□□□□ -0.93
PALB2-205ENST00000567003 FAM210AQ96ND0 272 aa9.25□□□□□ -0.93
PALB2-205ENST00000567003 C6orf48Q9UBA6 75 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms