RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	RASL11A	Q6T310	242 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	LINC00269	Q8N2A0	174 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	FAM210A	Q96ND0	272 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376		V9GYV3	84 aa		4.13	□□□□□ -1.75
TCF4-233	ENST00000566376	LRP2	P98164	4655 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	IGLV5-37	A0A075B6J1	123 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	TRBV25-1	A0A075B6N4	114 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	CIRBP	Q14011	172 aa	Known RBP	4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	MIA	Q16674	131 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	EIF5AL1	Q6IS14	154 aa	Known RBP	4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	WDR73	Q6P4I2	378 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	FRZB	Q92765	325 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	FAM104A	Q969W3	186 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	CHCHD5	Q9BSY4	110 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	CHAC1	Q9BUX1	264 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	NIT2	Q9NQR4	276 aa		4.12	□□□□□ -1.75
TCF4-233	ENST00000566376	IGHV1-24	A0A0C4DH33	117 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376		A0A1B0GUV1	79 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376		F2Z2F3	143 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	NDUFS6	O75380	124 aa	Known RBP	4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	TSHB	P01222	138 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	TRGC1	P0CF51	173 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	ESD	P10768	282 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	SEC61B	P60468	96 aa	Known RBP	4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	REG3A	Q06141	175 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	C9orf163	Q8N9P6	203 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	ISOC2	Q96AB3	205 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	URGCP-MRPS24	S4R325	110 aa		4.11	□□□□□ -1.75
TCF4-233	ENST00000566376	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	TRBV6-5	A0A0K0K1A5	114 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	TMEM262	E9PQX1	116 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	SMKR1	H3BMG3	65 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	GATC	O43716	136 aa	Known RBP	4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	CRP	P02741	224 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	CHTF8	P0CG12	524 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	TAGLN2	P37802	199 aa	Known RBP	4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	POLR2K	P53803	58 aa	Known RBP	4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	RPL23	P62829	140 aa	Known RBP	4.1	□□□□□ -1.75
TCF4-233	ENST00000566376		Q0VG73	95 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	KRTAP5-4	Q6L8H1	288 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	SDIM1	Q6ZPB5	146 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	SMIM7	Q9BQ49	75 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	TMEM243	Q9BU79	118 aa		4.1	□□□□□ -1.75
TCF4-233	ENST00000566376	SDHAF1	A6NFY7	115 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	HIGD1C	A8MV81	97 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376		H7C1H1	209 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	NCR2	O95944	276 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	SMIM17	P0DL12	118 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	CNBP	P62633	177 aa	Known RBP	4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	ELOB	Q15370	118 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	TMEM97	Q5BJF2	176 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	AMN1	Q8IY45	258 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	NUP35	Q8NFH5	326 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	RMI2	Q96E14	147 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	OSTC	Q9NRP0	149 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	TMEM242	Q9NWH2	141 aa		4.09	□□□□□ -1.75
TCF4-233	ENST00000566376	LPA	P08519	4548 aa		4.09	□□□□□ -1.76
TCF4-233	ENST00000566376	XKRY2	A2RUG3	117 aa		4.08	□□□□□ -1.76
TCF4-233	ENST00000566376	MT1HL1	P0DM35	61 aa		4.08	□□□□□ -1.76
TCF4-233	ENST00000566376	RAB4A	P20338	218 aa		4.08	□□□□□ -1.76
TCF4-233	ENST00000566376	CEBPG	P53567	150 aa		4.08	□□□□□ -1.76
TCF4-233	ENST00000566376	TSKU	Q8WUA8	353 aa		4.08	□□□□□ -1.76
TCF4-233	ENST00000566376	KRTAP4-4	Q9BYR3	166 aa		4.08	□□□□□ -1.76
TCF4-233	ENST00000566376	TMEM191A	Q9H0A3	160 aa		4.08	□□□□□ -1.76
TCF4-233	ENST00000566376	TRBV27	A0A0K0K1C4	114 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376		A0A1B0GXF2	115 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	ZNF727	A8MUV8	499 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376		A8MWL6	223 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	VCY	O14598	125 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	FGF6	P10767	208 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	COTL1	Q14019	142 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	TEX261	Q6UWH6	196 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	SPACA4	Q8TDM5	124 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	LINC00526	Q96FQ7	95 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	BIN3	Q9NQY0	253 aa		4.07	□□□□□ -1.76
TCF4-233	ENST00000566376	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	TRAV8-4	A0A0B4J246	113 aa		4.06	□□□□□ -1.76
TCF4-233	ENST00000566376		A0A1B0GUT8	65 aa		4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	SMIM27	A0A1W2PRY6	76 aa		4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	APCS	P02743	223 aa		4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	PKIA	P61925	76 aa		4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	MRPL51	Q4U2R6	128 aa	Known RBP	4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	HIGD2B	Q4VC39	106 aa		4.06	□□□□□ -1.76
TCF4-233	ENST00000566376		Q6ZUT4	128 aa		4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	MRPL52	Q86TS9	123 aa	Known RBP	4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.06	□□□□□ -1.76
TCF4-233	ENST00000566376	EIF5A2	Q9GZV4	153 aa	Known RBP	4.06	□□□□□ -1.76
TCF4-233	ENST00000566376		A0A096LNI7	61 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	IGKV3OR2-268	A0A0C4DH90	116 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	ADCYAP1	P18509	176 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	ADIRF	Q15847	76 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	FAM74A3	Q4VXF1	159 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	C14orf177	Q52M58	125 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	RNASE13	Q5GAN3	156 aa	Known RBP	4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	KCNIP4	Q6PIL6	250 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	OR5A1	Q8NGJ0	315 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	CDC42SE2	Q9NRR3	84 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376	UBE2D4	Q9Y2X8	147 aa		4.05	□□□□□ -1.76
TCF4-233	ENST00000566376		A0A087WYN8	130 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms