RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 VPREB3Q9UKI3 123 aa7.79□□□□□ -1.16
USB1-212ENST00000566082 LINC01546A6NGU7 62 aa7.79□□□□□ -1.16
USB1-212ENST00000566082 DAZ2Q13117 558 aaKnown RBP7.79□□□□□ -1.16
USB1-212ENST00000566082 MRPL23Q16540 153 aaKnown RBP7.79□□□□□ -1.16
USB1-212ENST00000566082 DAZ4Q86SG3 579 aaKnown RBP7.79□□□□□ -1.16
USB1-212ENST00000566082 DAZ3Q9NR90 486 aaKnown RBP7.79□□□□□ -1.16
USB1-212ENST00000566082 ABCA12Q86UK0 2595 aa7.79□□□□□ -1.16
USB1-212ENST00000566082 DNAJC30Q96LL9 226 aa7.79□□□□□ -1.16
USB1-212ENST00000566082 A0A096LPF7 62 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 H7C423 109 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 CRLF1O75462 422 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 MIR7-3HGQ8N6C7 128 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 C19orf84I3L1E1 186 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 COX7A2LO14548 114 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 XCL1P47992 114 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 PIK3CD-AS1Q5SR53 167 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 LINC00308Q8TCZ7 52 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 DCANP1Q8TF63 244 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 CITED1Q99966 193 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 A0A1W2PPR1 153 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 LECT2O14960 151 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 TRACP01848 142 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 SS18Q15532 418 aa7.78□□□□□ -1.16
USB1-212ENST00000566082 A0A1B0GX51 115 aa7.77□□□□□ -1.17
USB1-212ENST00000566082 ATP5G1P05496 136 aa7.77□□□□□ -1.17
USB1-212ENST00000566082 LINC00643Q86TS7 51 aa7.77□□□□□ -1.17
USB1-212ENST00000566082 POM121L12Q8N7R1 296 aa7.77□□□□□ -1.17
USB1-212ENST00000566082 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
USB1-212ENST00000566082 HIVEP2P31629 2446 aa7.77□□□□□ -1.17
USB1-212ENST00000566082 SPENQ96T58 3664 aaKnown RBP7.77□□□□□ -1.17
USB1-212ENST00000566082 PKD1L2Q7Z442 2459 aa7.77□□□□□ -1.17
USB1-212ENST00000566082 LST1O00453 97 aa7.77□□□□□ -1.17
USB1-212ENST00000566082 TMEM126AQ9H061 195 aa7.76□□□□□ -1.17
USB1-212ENST00000566082 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
USB1-212ENST00000566082 HIST2H2BDQ6DRA6 164 aa7.76□□□□□ -1.17
USB1-212ENST00000566082 ODF3Q96PU9 254 aa7.76□□□□□ -1.17
USB1-212ENST00000566082 C14orf132Q9NPU4 83 aa7.76□□□□□ -1.17
USB1-212ENST00000566082 DMXL2Q8TDJ6 3036 aa7.76□□□□□ -1.17
USB1-212ENST00000566082 K7EQD1 137 aa7.76□□□□□ -1.17
USB1-212ENST00000566082 HAMPP81172 84 aa7.76□□□□□ -1.17
USB1-212ENST00000566082 PYGO1Q9Y3Y4 419 aa7.75□□□□□ -1.17
USB1-212ENST00000566082 COX7B2Q8TF08 81 aa7.75□□□□□ -1.17
USB1-212ENST00000566082 UBL5Q9BZL1 73 aa7.75□□□□□ -1.17
USB1-212ENST00000566082 KIF25-AS1Q9Y6Z4 181 aa7.74□□□□□ -1.17
USB1-212ENST00000566082 RELNP78509 3460 aa7.74□□□□□ -1.17
USB1-212ENST00000566082 MRPS36P82909 103 aaKnown RBP7.74□□□□□ -1.17
USB1-212ENST00000566082 LRRK2Q5S007 2527 aa7.74□□□□□ -1.17
USB1-212ENST00000566082 JMJD1CQ15652 2540 aa7.74□□□□□ -1.17
USB1-212ENST00000566082 SDIM1Q6ZPB5 146 aa7.74□□□□□ -1.17
USB1-212ENST00000566082 Q6ZTI0 123 aa7.74□□□□□ -1.17
USB1-212ENST00000566082 SPANXDQ9BXN6 97 aa7.74□□□□□ -1.17
USB1-212ENST00000566082 ATOX1O00244 68 aa7.73□□□□□ -1.17
USB1-212ENST00000566082 NDUFA1O15239 70 aa7.73□□□□□ -1.17
USB1-212ENST00000566082 SPANXCQ9NY87 97 aa7.73□□□□□ -1.17
USB1-212ENST00000566082 ORMDL1Q9P0S3 153 aa7.73□□□□□ -1.17
USB1-212ENST00000566082 HIST2H2BCQ6DN03 193 aa7.73□□□□□ -1.17
USB1-212ENST00000566082 MAP6D1Q9H9H5 199 aa7.73□□□□□ -1.17
USB1-212ENST00000566082 UBE2D4Q9Y2X8 147 aa7.73□□□□□ -1.17
USB1-212ENST00000566082 H0YGX0 51 aa7.73□□□□□ -1.17
USB1-212ENST00000566082 MAP1AP78559 2803 aaPredicted RBP7.72□□□□□ -1.17
USB1-212ENST00000566082 NDUFA7O95182 113 aa7.72□□□□□ -1.17
USB1-212ENST00000566082 LINC00315P59091 139 aa7.72□□□□□ -1.17
USB1-212ENST00000566082 MTORP42345 2549 aa7.72□□□□□ -1.17
USB1-212ENST00000566082 RNF152Q8N8N0 203 aa7.72□□□□□ -1.17
USB1-212ENST00000566082 SMG1Q96Q15 3661 aaKnown RBP7.72□□□□□ -1.17
USB1-212ENST00000566082 PSMB8P28062 276 aa7.72□□□□□ -1.17
USB1-212ENST00000566082 J3QLI3 93 aa7.71□□□□□ -1.17
USB1-212ENST00000566082 SVIPQ8NHG7 77 aa7.71□□□□□ -1.17
USB1-212ENST00000566082 IGLV10-54A0A075B6I4 117 aa7.71□□□□□ -1.18
USB1-212ENST00000566082 IGLV1-40P01703 118 aa7.71□□□□□ -1.18
USB1-212ENST00000566082 CMC4P56277 68 aaPredicted RBP7.71□□□□□ -1.18
USB1-212ENST00000566082 SLPIP03973 132 aa7.71□□□□□ -1.18
USB1-212ENST00000566082 ZFYVE26Q68DK2 2539 aa7.7□□□□□ -1.18
USB1-212ENST00000566082 ANGP03950 147 aaKnown RBP7.7□□□□□ -1.18
USB1-212ENST00000566082 TIRAPP58753 221 aa7.7□□□□□ -1.18
USB1-212ENST00000566082 CCL24O00175 119 aa7.7□□□□□ -1.18
USB1-212ENST00000566082 UQCRQO14949 82 aa7.7□□□□□ -1.18
USB1-212ENST00000566082 Q96MF0 132 aa7.7□□□□□ -1.18
USB1-212ENST00000566082 ZZEF1O43149 2961 aa7.69□□□□□ -1.18
USB1-212ENST00000566082 AVPP01185 164 aa7.69□□□□□ -1.18
USB1-212ENST00000566082 FHL3Q13643 280 aa7.69□□□□□ -1.18
USB1-212ENST00000566082 J3KT08 172 aa7.69□□□□□ -1.18
USB1-212ENST00000566082 Q6Q795 121 aa7.69□□□□□ -1.18
USB1-212ENST00000566082 TMEM89A2RUT3 159 aa7.68□□□□□ -1.18
USB1-212ENST00000566082 TIMM17BO60830 172 aa7.68□□□□□ -1.18
USB1-212ENST00000566082 C18orf65Q6ZTR6 163 aa7.68□□□□□ -1.18
USB1-212ENST00000566082 ADGRG4Q8IZF6 3080 aa7.68□□□□□ -1.18
USB1-212ENST00000566082 TRBV10-1A0A0K0K1A3 114 aa7.68□□□□□ -1.18
USB1-212ENST00000566082 hADV29S1A0JD25 119 aa7.68□□□□□ -1.18
USB1-212ENST00000566082 RBMY1FQ15415 496 aaKnown RBP7.68□□□□□ -1.18
USB1-212ENST00000566082 C3orf22Q8N5N4 141 aa7.68□□□□□ -1.18
USB1-212ENST00000566082 NCR3O14931 201 aa7.67□□□□□ -1.18
USB1-212ENST00000566082 ESM1Q9NQ30 184 aa7.67□□□□□ -1.18
USB1-212ENST00000566082 LINC00242Q5T6M2 205 aa7.67□□□□□ -1.18
USB1-212ENST00000566082 AMELXQ99217 191 aa7.67□□□□□ -1.18
USB1-212ENST00000566082 GYPEP15421 78 aa7.67□□□□□ -1.18
USB1-212ENST00000566082 COX6A2Q02221 97 aa7.66□□□□□ -1.18
USB1-212ENST00000566082 Q6ZSN1 163 aa7.66□□□□□ -1.18
USB1-212ENST00000566082 COL27A1Q8IZC6 1860 aaPredicted RBP7.66□□□□□ -1.18
USB1-212ENST00000566082 TRAV23DV6A0A075B6W5 121 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms