RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 CHCHD10Q8WYQ3 142 aaPredicted RBP4.94□□□□□ -1.62
SMPD3-206ENST00000566009 ZFP30Q9Y2G7 519 aa4.94□□□□□ -1.62
SMPD3-206ENST00000566009 IGHV1-24A0A0C4DH33 117 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 IGHV1-58A0A0C4DH39 117 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 MAP1LC3B2A6NCE7 125 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 UMAD1C9J7I0 102 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 PEX7O00628 323 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 APOMO95445 188 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 FHITP49789 147 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 FOXI1Q12951 378 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 CST9LP1Q5W188 147 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 SFT2D1Q8WV19 159 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 SFRP2Q96HF1 295 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 MAP1LC3BQ9GZQ8 125 aa4.93□□□□□ -1.62
SMPD3-206ENST00000566009 IGKV3D-20A0A0C4DH25 116 aa4.92□□□□□ -1.62
SMPD3-206ENST00000566009 ZNF561-AS1K7EIQ3 104 aa4.92□□□□□ -1.62
SMPD3-206ENST00000566009 PAGE4O60829 102 aa4.92□□□□□ -1.62
SMPD3-206ENST00000566009 TPT1P13693 172 aaKnown RBP4.92□□□□□ -1.62
SMPD3-206ENST00000566009 CRIP1P50238 77 aa4.92□□□□□ -1.62
SMPD3-206ENST00000566009 LINC00242Q5T6M2 205 aa4.92□□□□□ -1.62
SMPD3-206ENST00000566009 ARL2-SNX15V9GYD0 113 aa4.92□□□□□ -1.62
SMPD3-206ENST00000566009 B4DEV8 164 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 S100A9P06702 114 aaKnown RBP4.91□□□□□ -1.62
SMPD3-206ENST00000566009 H2AFB1P0C5Y9 115 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 CAMPP49913 170 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 UBE2G1P62253 170 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 DNLZQ5SXM8 178 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 COX8CQ7Z4L0 72 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 FAM19A5Q7Z5A7 132 aaPredicted RBP4.91□□□□□ -1.62
SMPD3-206ENST00000566009 DAND5Q8N907 189 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 NUP35Q8NFH5 326 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 FAM213BQ8TBF2 198 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 ISOC2Q96AB3 205 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 FMC1Q96HJ9 113 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 TCEAL7Q9BRU2 100 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 IL36BQ9NZH7 164 aa4.91□□□□□ -1.62
SMPD3-206ENST00000566009 IGLV4-69A0A075B6H9 119 aa4.9□□□□□ -1.63
SMPD3-206ENST00000566009 KRBOX1C9JBD0 128 aa4.9□□□□□ -1.63
SMPD3-206ENST00000566009 C9JQL5 133 aa4.9□□□□□ -1.63
SMPD3-206ENST00000566009 ARMS2P0C7Q2 107 aa4.9□□□□□ -1.63
SMPD3-206ENST00000566009 RAB4BP61018 213 aa4.9□□□□□ -1.63
SMPD3-206ENST00000566009 IGKV2D-26A0A0A0MRZ7 120 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 A0A1B0GV50 99 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 GRIFINA4D1Z8 144 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 SH2D1AO60880 128 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 LTAP01374 205 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 ADCYAP1P18509 176 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 AKR1C3P42330 323 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 Q86TA4 180 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 BAGE2Q86Y30 109 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 KRTAP7-1Q8IUC3 87 aa4.89□□□□□ -1.63
SMPD3-206ENST00000566009 RAB19A4D1S5 217 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 H3BVH4 76 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 M0R036 132 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 CCL20P78556 96 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 FAM229BQ4G0N7 80 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 C10orf91Q5T1B1 145 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 TMEM243Q9BU79 118 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 UBE2D4Q9Y2X8 147 aa4.88□□□□□ -1.63
SMPD3-206ENST00000566009 TMSB15BA0A087X1C1 80 aa4.87□□□□□ -1.63
SMPD3-206ENST00000566009 TMEM218A2RU14 115 aa4.87□□□□□ -1.63
SMPD3-206ENST00000566009 M0QXV9 152 aa4.87□□□□□ -1.63
SMPD3-206ENST00000566009 M0R381 172 aa4.87□□□□□ -1.63
SMPD3-206ENST00000566009 ZNF56Q15929 161 aa4.87□□□□□ -1.63
SMPD3-206ENST00000566009 LINC01559Q495D7 138 aa4.87□□□□□ -1.63
SMPD3-206ENST00000566009 SPAG11AQ6PDA7 123 aa4.87□□□□□ -1.63
SMPD3-206ENST00000566009 SCO2A0A1W2PP80 73 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 C19orf71A6NCJ1 209 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 XCL1P47992 114 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 FAM74A3Q4VXF1 159 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 UQCC3Q6UW78 93 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 OR5A1Q8NGJ0 315 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 CAMK2N2Q96S95 79 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 CTDSP1Q9GZU7 261 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 MANBALQ9NQG1 85 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 GNG13Q9P2W3 67 aa4.86□□□□□ -1.63
SMPD3-206ENST00000566009 TMA7Q9Y2S6 64 aaKnown RBP4.86□□□□□ -1.63
SMPD3-206ENST00000566009 RPL35P42766 123 aaKnown RBP4.85□□□□□ -1.63
SMPD3-206ENST00000566009 RPL28P46779 137 aaKnown RBP4.85□□□□□ -1.63
SMPD3-206ENST00000566009 BLOC1S1P78537 153 aa4.85□□□□□ -1.63
SMPD3-206ENST00000566009 ZFP82Q8N141 532 aa4.85□□□□□ -1.63
SMPD3-206ENST00000566009 LOC105371267A0A1B0GV96 52 aa4.84□□□□□ -1.63
SMPD3-206ENST00000566009 UBE2L6O14933 153 aa4.84□□□□□ -1.63
SMPD3-206ENST00000566009 NUPR1O60356 82 aa4.84□□□□□ -1.63
SMPD3-206ENST00000566009 APOC3P02656 99 aa4.84□□□□□ -1.63
SMPD3-206ENST00000566009 MT2AP02795 61 aa4.84□□□□□ -1.63
SMPD3-206ENST00000566009 CXCL1P09341 107 aa4.84□□□□□ -1.63
SMPD3-206ENST00000566009 MDN1Q9NU22 5596 aa4.83□□□□□ -1.64
SMPD3-206ENST00000566009 PDE6DO43924 150 aa4.83□□□□□ -1.64
SMPD3-206ENST00000566009 IFNA1P01562 189 aa4.83□□□□□ -1.64
SMPD3-206ENST00000566009 OR5AL1P0C617 328 aa4.83□□□□□ -1.64
SMPD3-206ENST00000566009 TAGLN2P37802 199 aaKnown RBP4.83□□□□□ -1.64
SMPD3-206ENST00000566009 SSTP61278 116 aa4.83□□□□□ -1.64
SMPD3-206ENST00000566009 SPANXN1Q5VSR9 72 aa4.83□□□□□ -1.64
SMPD3-206ENST00000566009 C11orf52Q96A22 123 aa4.83□□□□□ -1.64
SMPD3-206ENST00000566009 BIN3Q9NQY0 253 aa4.83□□□□□ -1.64
SMPD3-206ENST00000566009 MUC21A0A140T8X8 626 aa4.82□□□□□ -1.64
SMPD3-206ENST00000566009 F8W036 122 aa4.82□□□□□ -1.64
SMPD3-206ENST00000566009 CCL25O15444 150 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms