RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 TMEM136Q6ZRR5 245 aa10.07□□□□□ -0.8
COMMD4-212ENST00000565517 SMIM2Q9BVW6 85 aa10.07□□□□□ -0.8
COMMD4-212ENST00000565517 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
COMMD4-212ENST00000565517 CDC42SE2Q9NRR3 84 aa10.07□□□□□ -0.8
COMMD4-212ENST00000565517 NPYP01303 97 aa10.06□□□□□ -0.8
COMMD4-212ENST00000565517 PRSS1P07477 247 aa10.06□□□□□ -0.8
COMMD4-212ENST00000565517 C10orf91Q5T1B1 145 aa10.06□□□□□ -0.8
COMMD4-212ENST00000565517 TMEM18Q96B42 140 aa10.06□□□□□ -0.8
COMMD4-212ENST00000565517 LAMTOR2Q9Y2Q5 125 aa10.06□□□□□ -0.8
COMMD4-212ENST00000565517 TRAV9-1A0A075B6T8 112 aa10.05□□□□□ -0.8
COMMD4-212ENST00000565517 IGKV3OR2-268A0A0C4DH90 116 aa10.05□□□□□ -0.8
COMMD4-212ENST00000565517 Q6ZSA8 131 aa10.05□□□□□ -0.8
COMMD4-212ENST00000565517 ZNF664Q8N3J9 261 aa10.05□□□□□ -0.8
COMMD4-212ENST00000565517 PRELID3AQ96N28 172 aa10.05□□□□□ -0.8
COMMD4-212ENST00000565517 TIMM21Q9BVV7 248 aa10.05□□□□□ -0.8
COMMD4-212ENST00000565517 PRSS47A8MTI9 375 aa10.04□□□□□ -0.8
COMMD4-212ENST00000565517 CHCHD10Q8WYQ3 142 aaPredicted RBP10.04□□□□□ -0.8
COMMD4-212ENST00000565517 KRTAP4-5Q9BYR2 181 aa10.04□□□□□ -0.8
COMMD4-212ENST00000565517 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
COMMD4-212ENST00000565517 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
COMMD4-212ENST00000565517 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
COMMD4-212ENST00000565517 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
COMMD4-212ENST00000565517 CFAP161Q6P656 301 aa10.03□□□□□ -0.8
COMMD4-212ENST00000565517 CARHSP1Q9Y2V2 147 aaKnown RBP10.03□□□□□ -0.8
COMMD4-212ENST00000565517 CCL25O15444 150 aa10.02□□□□□ -0.81
COMMD4-212ENST00000565517 CNBPP62633 177 aaKnown RBP10.01□□□□□ -0.81
COMMD4-212ENST00000565517 SS18Q15532 418 aa10.01□□□□□ -0.81
COMMD4-212ENST00000565517 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
COMMD4-212ENST00000565517 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
COMMD4-212ENST00000565517 hDV102S1A0JD36 115 aa10□□□□□ -0.81
COMMD4-212ENST00000565517 RAB5AP20339 215 aa10□□□□□ -0.81
COMMD4-212ENST00000565517 S100PP25815 95 aa10□□□□□ -0.81
COMMD4-212ENST00000565517 FOXI1Q12951 378 aa10□□□□□ -0.81
COMMD4-212ENST00000565517 RHEBQ15382 184 aa10□□□□□ -0.81
COMMD4-212ENST00000565517 MAP1LC3AQ9H492 121 aa10□□□□□ -0.81
COMMD4-212ENST00000565517 AP5S1Q9NUS5 200 aa10□□□□□ -0.81
COMMD4-212ENST00000565517 CD164L2Q6UWJ8 174 aa9.99□□□□□ -0.81
COMMD4-212ENST00000565517 C15orf56Q8N910 161 aa9.99□□□□□ -0.81
COMMD4-212ENST00000565517 SPANXA1Q9NS26 97 aa9.99□□□□□ -0.81
COMMD4-212ENST00000565517 C1orf196B1AJZ1 125 aa9.98□□□□□ -0.81
COMMD4-212ENST00000565517 EPM2AB3EWF7 344 aa9.98□□□□□ -0.81
COMMD4-212ENST00000565517 XCL1P47992 114 aa9.98□□□□□ -0.81
COMMD4-212ENST00000565517 RPL39P62891 51 aaKnown RBP9.98□□□□□ -0.81
COMMD4-212ENST00000565517 DNAH8Q96JB1 4490 aa9.98□□□□□ -0.81
COMMD4-212ENST00000565517 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.97□□□□□ -0.81
COMMD4-212ENST00000565517 K7EMI3 77 aa9.97□□□□□ -0.81
COMMD4-212ENST00000565517 HAMPP81172 84 aa9.97□□□□□ -0.81
COMMD4-212ENST00000565517 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
COMMD4-212ENST00000565517 COX19Q49B96 90 aa9.97□□□□□ -0.81
COMMD4-212ENST00000565517 Q8N8P6 123 aa9.97□□□□□ -0.81
COMMD4-212ENST00000565517 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
COMMD4-212ENST00000565517 GVQW2A0A096LPI5 108 aaPredicted RBP9.96□□□□□ -0.82
COMMD4-212ENST00000565517 LOC389332A0A1B0GUA5 103 aa9.96□□□□□ -0.82
COMMD4-212ENST00000565517 SMR3BP02814 79 aaPredicted RBP9.96□□□□□ -0.82
COMMD4-212ENST00000565517 SLPIP03973 132 aa9.96□□□□□ -0.82
COMMD4-212ENST00000565517 Q6ZUT4 128 aa9.96□□□□□ -0.82
COMMD4-212ENST00000565517 CHAC1Q9BUX1 264 aa9.96□□□□□ -0.82
COMMD4-212ENST00000565517 RPS10P5Q9NQ39 176 aa9.96□□□□□ -0.82
COMMD4-212ENST00000565517 PYGO1Q9Y3Y4 419 aa9.96□□□□□ -0.82
COMMD4-212ENST00000565517 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
COMMD4-212ENST00000565517 FAM229AH3BQW9 127 aa9.95□□□□□ -0.82
COMMD4-212ENST00000565517 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
COMMD4-212ENST00000565517 SDIM1Q6ZPB5 146 aa9.95□□□□□ -0.82
COMMD4-212ENST00000565517 FAM104AQ969W3 186 aa9.95□□□□□ -0.82
COMMD4-212ENST00000565517 NXT2Q9NPJ8 142 aaKnown RBP9.95□□□□□ -0.82
COMMD4-212ENST00000565517 ORMDL2Q53FV1 153 aa9.94□□□□□ -0.82
COMMD4-212ENST00000565517 Q5VSD8 79 aa9.94□□□□□ -0.82
COMMD4-212ENST00000565517 SCXQ7RTU7 201 aa9.94□□□□□ -0.82
COMMD4-212ENST00000565517 IGHV3-64A0A075B6Q5 118 aa9.93□□□□□ -0.82
COMMD4-212ENST00000565517 TRAV13-1A0A0B4J241 112 aa9.93□□□□□ -0.82
COMMD4-212ENST00000565517 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
COMMD4-212ENST00000565517 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
COMMD4-212ENST00000565517 HIGD2BQ4VC39 106 aa9.93□□□□□ -0.82
COMMD4-212ENST00000565517 SNAPINO95295 136 aa9.92□□□□□ -0.82
COMMD4-212ENST00000565517 APOC3P02656 99 aa9.92□□□□□ -0.82
COMMD4-212ENST00000565517 MT-ND6P03923 174 aa9.92□□□□□ -0.82
COMMD4-212ENST00000565517 KIAA1644Q3SXP7 199 aa9.92□□□□□ -0.82
COMMD4-212ENST00000565517 SVBPQ8N300 66 aa9.92□□□□□ -0.82
COMMD4-212ENST00000565517 COX7A2LO14548 114 aa9.91□□□□□ -0.82
COMMD4-212ENST00000565517 G0S2P27469 103 aa9.91□□□□□ -0.82
COMMD4-212ENST00000565517 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
COMMD4-212ENST00000565517 OPRPNQ99935 248 aaPredicted RBP9.91□□□□□ -0.82
COMMD4-212ENST00000565517 CYSLTR1Q9Y271 337 aa9.91□□□□□ -0.82
COMMD4-212ENST00000565517 NPSP0C0P6 89 aa9.9□□□□□ -0.82
COMMD4-212ENST00000565517 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
COMMD4-212ENST00000565517 C2orf66Q6UXQ4 117 aa9.9□□□□□ -0.82
COMMD4-212ENST00000565517 PCLOQ9Y6V0 5065 aa9.89□□□□□ -0.83
COMMD4-212ENST00000565517 IGLV4-3A0A075B6K6 122 aa9.89□□□□□ -0.83
COMMD4-212ENST00000565517 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
COMMD4-212ENST00000565517 MALP21145 153 aa9.89□□□□□ -0.83
COMMD4-212ENST00000565517 TMEM141Q96I45 108 aa9.89□□□□□ -0.83
COMMD4-212ENST00000565517 ALKBH7Q9BT30 221 aaPredicted RBP9.89□□□□□ -0.83
COMMD4-212ENST00000565517 IGHV3OR16-9A0A0B4J2B5 98 aa9.88□□□□□ -0.83
COMMD4-212ENST00000565517 IFITM10A6NMD0 228 aa9.88□□□□□ -0.83
COMMD4-212ENST00000565517 APOMO95445 188 aa9.88□□□□□ -0.83
COMMD4-212ENST00000565517 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
COMMD4-212ENST00000565517 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
COMMD4-212ENST00000565517 FABP9Q0Z7S8 132 aa9.87□□□□□ -0.83
COMMD4-212ENST00000565517 TEX43Q6ZNM6 134 aa9.87□□□□□ -0.83
COMMD4-212ENST00000565517 C5orf38Q86SI9 138 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms