RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 TRAV9-1A0A075B6T8 112 aa12.19□□□□□ -0.46
PKD1-229ENST00000564890 TCAPO15273 167 aa12.19□□□□□ -0.46
PKD1-229ENST00000564890 CLRN3Q8NCR9 226 aa12.19□□□□□ -0.46
PKD1-229ENST00000564890 S100PP25815 95 aa12.18□□□□□ -0.46
PKD1-229ENST00000564890 RHEBQ15382 184 aa12.18□□□□□ -0.46
PKD1-229ENST00000564890 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
PKD1-229ENST00000564890 TMEM18Q96B42 140 aa12.17□□□□□ -0.46
PKD1-229ENST00000564890 RPS10P5Q9NQ39 176 aa12.17□□□□□ -0.46
PKD1-229ENST00000564890 CDC42SE2Q9NRR3 84 aa12.17□□□□□ -0.46
PKD1-229ENST00000564890 LAMTOR2Q9Y2Q5 125 aa12.17□□□□□ -0.46
PKD1-229ENST00000564890 GAGE12HA6NDE8 117 aa12.16□□□□□ -0.46
PKD1-229ENST00000564890 SMAGPQ0VAQ4 97 aa12.16□□□□□ -0.46
PKD1-229ENST00000564890 ZNF664Q8N3J9 261 aa12.16□□□□□ -0.46
PKD1-229ENST00000564890 CHCHD10Q8WYQ3 142 aaPredicted RBP12.16□□□□□ -0.46
PKD1-229ENST00000564890 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
PKD1-229ENST00000564890 PRSS1P07477 247 aa12.15□□□□□ -0.46
PKD1-229ENST00000564890 MAP1LC3AQ9H492 121 aa12.15□□□□□ -0.46
PKD1-229ENST00000564890 LOC389332A0A1B0GUA5 103 aa12.14□□□□□ -0.47
PKD1-229ENST00000564890 LINC01620Q4KN68 170 aa12.14□□□□□ -0.47
PKD1-229ENST00000564890 CSDC2Q9Y534 153 aaKnown RBP12.14□□□□□ -0.47
PKD1-229ENST00000564890 LINC00959A0A1B0GUT2 108 aa12.13□□□□□ -0.47
PKD1-229ENST00000564890 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
PKD1-229ENST00000564890 APOC3P02656 99 aa12.13□□□□□ -0.47
PKD1-229ENST00000564890 RAB5AP20339 215 aa12.13□□□□□ -0.47
PKD1-229ENST00000564890 XGP55808 180 aa12.13□□□□□ -0.47
PKD1-229ENST00000564890 RPL39P62891 51 aaKnown RBP12.13□□□□□ -0.47
PKD1-229ENST00000564890 NDUFA5Q16718 116 aa12.13□□□□□ -0.47
PKD1-229ENST00000564890 TIMM21Q9BVV7 248 aa12.13□□□□□ -0.47
PKD1-229ENST00000564890 KRTAP17-1Q9BYP8 105 aa12.13□□□□□ -0.47
PKD1-229ENST00000564890 RNASE13Q5GAN3 156 aaKnown RBP12.12□□□□□ -0.47
PKD1-229ENST00000564890 CCL25O15444 150 aa12.11□□□□□ -0.47
PKD1-229ENST00000564890 XCL1P47992 114 aa12.11□□□□□ -0.47
PKD1-229ENST00000564890 SS18Q15532 418 aa12.11□□□□□ -0.47
PKD1-229ENST00000564890 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
PKD1-229ENST00000564890 Q6ZUT4 128 aa12.11□□□□□ -0.47
PKD1-229ENST00000564890 hDV102S1A0JD36 115 aa12.1□□□□□ -0.47
PKD1-229ENST00000564890 FOXI1Q12951 378 aa12.1□□□□□ -0.47
PKD1-229ENST00000564890 SLC7A5P1Q8MH63 180 aa12.1□□□□□ -0.47
PKD1-229ENST00000564890 SVBPQ8N300 66 aa12.1□□□□□ -0.47
PKD1-229ENST00000564890 Q8N8P6 123 aa12.1□□□□□ -0.47
PKD1-229ENST00000564890 GNB1LQ9BYB4 327 aa12.1□□□□□ -0.47
PKD1-229ENST00000564890 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
PKD1-229ENST00000564890 FAM30AQ9NZY2 134 aa12.1□□□□□ -0.47
PKD1-229ENST00000564890 SNAPINO95295 136 aa12.09□□□□□ -0.47
PKD1-229ENST00000564890 HAMPP81172 84 aa12.09□□□□□ -0.47
PKD1-229ENST00000564890 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
PKD1-229ENST00000564890 DNAH8Q96JB1 4490 aa12.08□□□□□ -0.48
PKD1-229ENST00000564890 COX19Q49B96 90 aa12.08□□□□□ -0.48
PKD1-229ENST00000564890 C15orf56Q8N910 161 aa12.08□□□□□ -0.48
PKD1-229ENST00000564890 TRAV13-1A0A0B4J241 112 aa12.07□□□□□ -0.48
PKD1-229ENST00000564890 Q8N1X5 172 aa12.07□□□□□ -0.48
PKD1-229ENST00000564890 AP5S1Q9NUS5 200 aa12.07□□□□□ -0.48
PKD1-229ENST00000564890 C1orf196B1AJZ1 125 aa12.06□□□□□ -0.48
PKD1-229ENST00000564890 CD164L2Q6UWJ8 174 aa12.06□□□□□ -0.48
PKD1-229ENST00000564890 Q6ZSA8 131 aa12.06□□□□□ -0.48
PKD1-229ENST00000564890 FAM104AQ969W3 186 aa12.06□□□□□ -0.48
PKD1-229ENST00000564890 OPRPNQ99935 248 aaPredicted RBP12.06□□□□□ -0.48
PKD1-229ENST00000564890 NXT2Q9NPJ8 142 aaKnown RBP12.06□□□□□ -0.48
PKD1-229ENST00000564890 TGIF2-C20orf24A0A0A6YYL0 155 aa12.05□□□□□ -0.48
PKD1-229ENST00000564890 MT-ND6P03923 174 aa12.05□□□□□ -0.48
PKD1-229ENST00000564890 IFI27P40305 119 aaPredicted RBP12.05□□□□□ -0.48
PKD1-229ENST00000564890 MRPS36P82909 103 aaKnown RBP12.05□□□□□ -0.48
PKD1-229ENST00000564890 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
PKD1-229ENST00000564890 KRTAP4-5Q9BYR2 181 aa12.05□□□□□ -0.48
PKD1-229ENST00000564890 CNBPP62633 177 aaKnown RBP12.04□□□□□ -0.48
PKD1-229ENST00000564890 ORMDL2Q53FV1 153 aa12.04□□□□□ -0.48
PKD1-229ENST00000564890 C9orf163Q8N9P6 203 aa12.04□□□□□ -0.48
PKD1-229ENST00000564890 MRPL18Q9H0U6 180 aaKnown RBP12.04□□□□□ -0.48
PKD1-229ENST00000564890 K7EMI3 77 aa12.03□□□□□ -0.48
PKD1-229ENST00000564890 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
PKD1-229ENST00000564890 ALKBH7Q9BT30 221 aaPredicted RBP12.03□□□□□ -0.48
PKD1-229ENST00000564890 CYSLTR1Q9Y271 337 aa12.03□□□□□ -0.48
PKD1-229ENST00000564890 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
PKD1-229ENST00000564890 GVQW2A0A096LPI5 108 aaPredicted RBP12.02□□□□□ -0.49
PKD1-229ENST00000564890 SLPIP03973 132 aa12.02□□□□□ -0.49
PKD1-229ENST00000564890 C2orf66Q6UXQ4 117 aa12.02□□□□□ -0.49
PKD1-229ENST00000564890 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.01□□□□□ -0.49
PKD1-229ENST00000564890 IGHV1-58A0A0C4DH39 117 aa12.01□□□□□ -0.49
PKD1-229ENST00000564890 IFITM10A6NMD0 228 aa12.01□□□□□ -0.49
PKD1-229ENST00000564890 SMR3BP02814 79 aaPredicted RBP12.01□□□□□ -0.49
PKD1-229ENST00000564890 PCLOQ9Y6V0 5065 aa12□□□□□ -0.49
PKD1-229ENST00000564890 IGLV4-3A0A075B6K6 122 aa12□□□□□ -0.49
PKD1-229ENST00000564890 COX7A2LO14548 114 aa12□□□□□ -0.49
PKD1-229ENST00000564890 PRSS3P2Q8NHM4 247 aa12□□□□□ -0.49
PKD1-229ENST00000564890 MALP21145 153 aa11.99□□□□□ -0.49
PKD1-229ENST00000564890 TMEM141Q96I45 108 aa11.99□□□□□ -0.49
PKD1-229ENST00000564890 TRAPPC1Q9Y5R8 145 aa11.99□□□□□ -0.49
PKD1-229ENST00000564890 IGHV3-64A0A075B6Q5 118 aa11.98□□□□□ -0.49
PKD1-229ENST00000564890 EPM2AB3EWF7 344 aa11.98□□□□□ -0.49
PKD1-229ENST00000564890 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
PKD1-229ENST00000564890 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
PKD1-229ENST00000564890 C5orf38Q86SI9 138 aa11.98□□□□□ -0.49
PKD1-229ENST00000564890 CHAC1Q9BUX1 264 aa11.98□□□□□ -0.49
PKD1-229ENST00000564890 G0S2P27469 103 aa11.97□□□□□ -0.49
PKD1-229ENST00000564890 LINC00526Q96FQ7 95 aa11.97□□□□□ -0.49
PKD1-229ENST00000564890 Q6ZN92 141 aa11.96□□□□□ -0.49
PKD1-229ENST00000564890 TEX43Q6ZNM6 134 aa11.96□□□□□ -0.49
PKD1-229ENST00000564890 IGIPA6NJ69 53 aa11.95□□□□□ -0.5
PKD1-229ENST00000564890 ZNF561-AS1K7EIQ3 104 aa11.95□□□□□ -0.5
PKD1-229ENST00000564890 Q5VSD8 79 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms