RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 HECTD1Q9ULT8 2610 aa5.21□□□□□ -1.57
HERPUD1-209ENST00000564678 HIVEP2P31629 2446 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 TRBV7-3A0A075B6L6 115 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 TRBV10-1A0A0K0K1A3 114 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 ZNF815PA8K554 130 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 LY6G6DO95868 133 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 TMEM170BQ5T4T1 132 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 ZNRF2Q8NHG8 242 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 SPANXA1Q9NS26 97 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 MRPL16Q9NX20 251 aaKnown RBP5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 ITPR2Q14571 2701 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 DEFB104AQ8WTQ1 72 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 C16orf74Q96GX8 76 aa5.21□□□□□ -1.58
HERPUD1-209ENST00000564678 IGHV3OR16-12A0A075B7B8 117 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 TRAV4A0A0B4J268 109 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 H3BUT2 72 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 K7EP13 123 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 MRPS36P82909 103 aaKnown RBP5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 SCGB1D4Q6XE38 83 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 CHCHD7Q9BUK0 85 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 UNC79Q9P2D8 2635 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 NF1P21359 2839 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 CUBNO60494 3623 aa5.2□□□□□ -1.58
HERPUD1-209ENST00000564678 TRGV1A0A0A0MS02 117 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 A0A1B0GWB2 263 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 A0A1W2PPM0 123 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 TMEM223A0PJW6 202 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 LEPROTO15243 131 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 GIG44P09565 113 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 INSL3P51460 131 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 OPRPNQ99935 248 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 SMR3AQ99954 134 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 TIMM21Q9BVV7 248 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 SPANXB1Q9NS25 103 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 UBE2D4Q9Y2X8 147 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 J3QQQ9 107 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 FABP2P12104 132 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 ZNF22P17026 224 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 EMP1P54849 157 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 RPL36AP83881 106 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 SMAGPQ0VAQ4 97 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 C12orf74Q32Q52 190 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 DAZ4Q86SG3 579 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 CSNK1G2-AS1Q8NCQ2 148 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 OR5A1Q8NGJ0 315 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 RPL36ALQ969Q0 106 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 RAB37Q96AX2 223 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 PLEKHB2Q96CS7 222 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 OVOL2Q9BRP0 275 aa5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 DAZ3Q9NR90 486 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 NHP2Q9NX24 153 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-209ENST00000564678 A0A0J9YY99 117 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 TINCRA0A1B0GVN0 87 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 K7EP34 96 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 LGALS3P17931 250 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 SRSF9Q13242 221 aaKnown RBP eCLIP5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 SLC25A29Q8N8R3 303 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 FAM104AQ969W3 186 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 Q9UF83 564 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 MTORP42345 2549 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 A0A0J9YXV3 536 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 K7EQD1 137 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 RRN3P1Q2M238 152 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 Q6ZTI0 123 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 V9GYY9 64 aa5.18□□□□□ -1.58
HERPUD1-209ENST00000564678 KRTAP10-3P60369 221 aa5.17□□□□□ -1.58
HERPUD1-209ENST00000564678 LINC00336Q6ZUF6 198 aa5.17□□□□□ -1.58
HERPUD1-209ENST00000564678 NOP10Q9NPE3 64 aaKnown RBP5.17□□□□□ -1.58
HERPUD1-209ENST00000564678 A0A087WZ39 114 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 TRBV6-4A0A1B0GX49 114 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 PLAC8L1A1L4L8 177 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 IGLL5B9A064 214 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 RPL35AP18077 110 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 WWC2-AS2Q96NR7 200 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 GTSF1LQ9H1H1 148 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 SPCS1Q9Y6A9 102 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 OXTP01178 125 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 UBE2D1P51668 147 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 TSPEAR-AS2P59090 65 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 UBE2D3P61077 147 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 UBE2D2P62837 147 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 C9orf66Q5T8R8 295 aa5.16□□□□□ -1.58
HERPUD1-209ENST00000564678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.15□□□□□ -1.58
HERPUD1-209ENST00000564678 IGHV3-38A0A0C4DH36 116 aa5.15□□□□□ -1.58
HERPUD1-209ENST00000564678 IGHV1-58A0A0C4DH39 117 aa5.15□□□□□ -1.58
HERPUD1-209ENST00000564678 IGKV2-29A2NJV5 120 aaPredicted RBP5.15□□□□□ -1.58
HERPUD1-209ENST00000564678 H7C423 109 aa5.15□□□□□ -1.58
HERPUD1-209ENST00000564678 FAM19A3Q7Z5A8 133 aa5.15□□□□□ -1.58
HERPUD1-209ENST00000564678 WFDC10AQ9H1F0 79 aa5.15□□□□□ -1.58
HERPUD1-209ENST00000564678 TRGV2A0A075B6R0 118 aa5.15□□□□□ -1.59
HERPUD1-209ENST00000564678 INAFM1C9JVW0 142 aa5.15□□□□□ -1.59
HERPUD1-209ENST00000564678 K7ERJ3 54 aa5.15□□□□□ -1.59
HERPUD1-209ENST00000564678 IGHV3-30P01768 117 aa5.15□□□□□ -1.59
HERPUD1-209ENST00000564678 IGHV3-30-3P0DP02 117 aa5.15□□□□□ -1.59
HERPUD1-209ENST00000564678 IGHV3-30-5P0DP03 117 aa5.15□□□□□ -1.59
HERPUD1-209ENST00000564678 CEMP1Q6PRD7 247 aaPredicted RBP5.15□□□□□ -1.59
HERPUD1-209ENST00000564678 KIR2DL5BQ8NHK3 375 aa5.15□□□□□ -1.59
HERPUD1-209ENST00000564678 IGLV5-45A0A087WSX0 123 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 SMIM9A6NGZ8 99 aa5.14□□□□□ -1.59
HERPUD1-209ENST00000564678 GAGE7O76087 117 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms