RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 D6R8Y8 96 aa19.87■□□□□ 0.77
CMTM4-204ENST00000563952 C20orf78Q9BR46 151 aa19.87■□□□□ 0.77
CMTM4-204ENST00000563952 AP5S1Q9NUS5 200 aa19.87■□□□□ 0.77
CMTM4-204ENST00000563952 TNFRSF6BO95407 300 aa19.86■□□□□ 0.77
CMTM4-204ENST00000563952 MT-ND4LP03901 98 aa19.86■□□□□ 0.77
CMTM4-204ENST00000563952 IFITM2Q01629 132 aa19.86■□□□□ 0.77
CMTM4-204ENST00000563952 ATP5L2Q7Z4Y8 100 aa19.86■□□□□ 0.77
CMTM4-204ENST00000563952 TRBV24-1A0A075B6N3 115 aa19.85■□□□□ 0.77
CMTM4-204ENST00000563952 CFAP161Q6P656 301 aa19.85■□□□□ 0.77
CMTM4-204ENST00000563952 LINC00528Q8N1L1 170 aa19.85■□□□□ 0.77
CMTM4-204ENST00000563952 ANAPC16Q96DE5 110 aa19.85■□□□□ 0.77
CMTM4-204ENST00000563952 CDC42SE2Q9NRR3 84 aa19.85■□□□□ 0.77
CMTM4-204ENST00000563952 LINC00959A0A1B0GUT2 108 aa19.84■□□□□ 0.77
CMTM4-204ENST00000563952 XCL1P47992 114 aa19.84■□□□□ 0.77
CMTM4-204ENST00000563952 CNBPP62633 177 aaKnown RBP19.84■□□□□ 0.77
CMTM4-204ENST00000563952 ZNF664Q8N3J9 261 aa19.84■□□□□ 0.77
CMTM4-204ENST00000563952 C15orf56Q8N910 161 aa19.84■□□□□ 0.77
CMTM4-204ENST00000563952 CIRBP-AS1Q8TBR5 109 aa19.84■□□□□ 0.77
CMTM4-204ENST00000563952 NPYP01303 97 aa19.82■□□□□ 0.76
CMTM4-204ENST00000563952 CCL25O15444 150 aa19.81■□□□□ 0.76
CMTM4-204ENST00000563952 RPL32P62910 135 aaKnown RBP19.81■□□□□ 0.76
CMTM4-204ENST00000563952 FOXI1Q12951 378 aa19.81■□□□□ 0.76
CMTM4-204ENST00000563952 HIGD2BQ4VC39 106 aa19.81■□□□□ 0.76
CMTM4-204ENST00000563952 SMIM2Q9BVW6 85 aa19.81■□□□□ 0.76
CMTM4-204ENST00000563952 VPS13BQ7Z7G8 4022 aa19.81■□□□□ 0.76
CMTM4-204ENST00000563952 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.8■□□□□ 0.76
CMTM4-204ENST00000563952 PPBPP02775 128 aa19.8■□□□□ 0.76
CMTM4-204ENST00000563952 SLPIP03973 132 aa19.8■□□□□ 0.76
CMTM4-204ENST00000563952 SMAGPQ0VAQ4 97 aa19.8■□□□□ 0.76
CMTM4-204ENST00000563952 SS18Q15532 418 aa19.8■□□□□ 0.76
CMTM4-204ENST00000563952 UBE2D4Q9Y2X8 147 aa19.8■□□□□ 0.76
CMTM4-204ENST00000563952 PLA2G1BP04054 148 aaKnown RBP19.78■□□□□ 0.76
CMTM4-204ENST00000563952 SDIM1Q6ZPB5 146 aa19.78■□□□□ 0.76
CMTM4-204ENST00000563952 ORMDL3Q8N138 153 aa19.78■□□□□ 0.76
CMTM4-204ENST00000563952 TMEM18Q96B42 140 aa19.78■□□□□ 0.76
CMTM4-204ENST00000563952 RNASE13Q5GAN3 156 aaKnown RBP19.77■□□□□ 0.76
CMTM4-204ENST00000563952 UQCC3Q6UW78 93 aa19.77■□□□□ 0.76
CMTM4-204ENST00000563952 IGHV3-64A0A075B6Q5 118 aa19.76■□□□□ 0.75
CMTM4-204ENST00000563952 PHOX2AO14813 284 aa19.76■□□□□ 0.75
CMTM4-204ENST00000563952 TCAPO15273 167 aa19.76■□□□□ 0.75
CMTM4-204ENST00000563952 TMEM136Q6ZRR5 245 aa19.76■□□□□ 0.75
CMTM4-204ENST00000563952 CSDC2Q9Y534 153 aaKnown RBP19.76■□□□□ 0.75
CMTM4-204ENST00000563952 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP19.76■□□□□ 0.75
CMTM4-204ENST00000563952 PRELID3AQ96N28 172 aa19.75■□□□□ 0.75
CMTM4-204ENST00000563952 SRRM2Q9UQ35 2752 aaKnown RBP19.75■□□□□ 0.75
CMTM4-204ENST00000563952 ADCYAP1P18509 176 aa19.74■□□□□ 0.75
CMTM4-204ENST00000563952 RPL39P62891 51 aaKnown RBP19.73■□□□□ 0.75
CMTM4-204ENST00000563952 Q6ZUT4 128 aa19.73■□□□□ 0.75
CMTM4-204ENST00000563952 GVQW2A0A096LPI5 108 aaPredicted RBP19.72■□□□□ 0.75
CMTM4-204ENST00000563952 TMEM218A2RU14 115 aa19.72■□□□□ 0.75
CMTM4-204ENST00000563952 PANO1I0J062 215 aa19.72■□□□□ 0.75
CMTM4-204ENST00000563952 CD164L2Q6UWJ8 174 aa19.72■□□□□ 0.75
CMTM4-204ENST00000563952 TIMM21Q9BVV7 248 aa19.72■□□□□ 0.75
CMTM4-204ENST00000563952 TRAV13-1A0A0B4J241 112 aa19.69■□□□□ 0.74
CMTM4-204ENST00000563952 IGHV1-58A0A0C4DH39 117 aa19.69■□□□□ 0.74
CMTM4-204ENST00000563952 C1orf196B1AJZ1 125 aa19.69■□□□□ 0.74
CMTM4-204ENST00000563952 RAB5AP20339 215 aa19.68■□□□□ 0.74
CMTM4-204ENST00000563952 COMMD7Q86VX2 200 aa19.67■□□□□ 0.74
CMTM4-204ENST00000563952 LOC389332A0A1B0GUA5 103 aa19.66■□□□□ 0.74
CMTM4-204ENST00000563952 DPH3Q96FX2 82 aa19.66■□□□□ 0.74
CMTM4-204ENST00000563952 CHTF8P0CG12 524 aa19.65■□□□□ 0.74
CMTM4-204ENST00000563952 LINC00526Q96FQ7 95 aa19.65■□□□□ 0.74
CMTM4-204ENST00000563952 SPANXA1Q9NS26 97 aa19.65■□□□□ 0.74
CMTM4-204ENST00000563952 LAMTOR2Q9Y2Q5 125 aa19.65■□□□□ 0.74
CMTM4-204ENST00000563952 IMMP2LQ96T52 175 aa19.64■□□□□ 0.73
CMTM4-204ENST00000563952 MAP1LC3AQ9H492 121 aa19.64■□□□□ 0.73
CMTM4-204ENST00000563952 MALP21145 153 aa19.63■□□□□ 0.73
CMTM4-204ENST00000563952 OPRPNQ99935 248 aaPredicted RBP19.63■□□□□ 0.73
CMTM4-204ENST00000563952 SEC11CQ9BY50 192 aa19.63■□□□□ 0.73
CMTM4-204ENST00000563952 CTDSP1Q9GZU7 261 aa19.63■□□□□ 0.73
CMTM4-204ENST00000563952 COX7A2LO14548 114 aa19.62■□□□□ 0.73
CMTM4-204ENST00000563952 COX6A2Q02221 97 aa19.62■□□□□ 0.73
CMTM4-204ENST00000563952 CIRBPQ14011 172 aaKnown RBP19.62■□□□□ 0.73
CMTM4-204ENST00000563952 FLG2Q5D862 2391 aaPredicted RBP19.62■□□□□ 0.73
CMTM4-204ENST00000563952 FAM104AQ969W3 186 aa19.61■□□□□ 0.73
CMTM4-204ENST00000563952 PRSS47A8MTI9 375 aa19.6■□□□□ 0.73
CMTM4-204ENST00000563952 ZNF561-AS1K7EIQ3 104 aa19.6■□□□□ 0.73
CMTM4-204ENST00000563952 PRSS3P2Q8NHM4 247 aa19.59■□□□□ 0.73
CMTM4-204ENST00000563952 SPACA4Q8TDM5 124 aa19.59■□□□□ 0.73
CMTM4-204ENST00000563952 MRPS36P82909 103 aaKnown RBP19.58■□□□□ 0.72
CMTM4-204ENST00000563952 C5orf38Q86SI9 138 aa19.58■□□□□ 0.72
CMTM4-204ENST00000563952 HERC1Q15751 4861 aa19.58■□□□□ 0.72
CMTM4-204ENST00000563952 IFI27P40305 119 aaPredicted RBP19.57■□□□□ 0.72
CMTM4-204ENST00000563952 KRTAP10-4P60372 401 aaPredicted RBP19.57■□□□□ 0.72
CMTM4-204ENST00000563952 RPL37AP61513 92 aaKnown RBP19.57■□□□□ 0.72
CMTM4-204ENST00000563952 Q8N8P6 123 aa19.57■□□□□ 0.72
CMTM4-204ENST00000563952 CARD19Q96LW7 228 aa19.57■□□□□ 0.72
CMTM4-204ENST00000563952 IGKV2-24A0A0C4DH68 120 aa19.56■□□□□ 0.72
CMTM4-204ENST00000563952 A0A087WYN8 130 aa19.55■□□□□ 0.72
CMTM4-204ENST00000563952 IFITM10A6NMD0 228 aa19.55■□□□□ 0.72
CMTM4-204ENST00000563952 SYCNQ0VAF6 134 aa19.54■□□□□ 0.72
CMTM4-204ENST00000563952 IGLV4-69A0A075B6H9 119 aa19.53■□□□□ 0.72
CMTM4-204ENST00000563952 TRAV9-1A0A075B6T8 112 aa19.53■□□□□ 0.72
CMTM4-204ENST00000563952 S100PP25815 95 aa19.53■□□□□ 0.72
CMTM4-204ENST00000563952 MAJINQ3KP22 176 aa19.53■□□□□ 0.72
CMTM4-204ENST00000563952 KIAA1644Q3SXP7 199 aa19.51■□□□□ 0.71
CMTM4-204ENST00000563952 PYGO1Q9Y3Y4 419 aa19.51■□□□□ 0.71
CMTM4-204ENST00000563952 MYCBP2O75592 4640 aa19.51■□□□□ 0.71
CMTM4-204ENST00000563952 APOMO95445 188 aa19.5■□□□□ 0.71
CMTM4-204ENST00000563952 IGLV4-3A0A075B6K6 122 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms