RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 IGLC6P0CF74 106 aa5.85□□□□□ -1.47
HDGFL3-204ENST00000563790 UBE2G1P62253 170 aa5.85□□□□□ -1.47
HDGFL3-204ENST00000563790 HIGD2BQ4VC39 106 aa5.85□□□□□ -1.47
HDGFL3-204ENST00000563790 SUMO4Q6EEV6 95 aa5.85□□□□□ -1.47
HDGFL3-204ENST00000563790 PHF5AQ7RTV0 110 aaKnown RBP5.85□□□□□ -1.47
HDGFL3-204ENST00000563790 PGLYRP4Q96LB8 373 aa5.85□□□□□ -1.47
HDGFL3-204ENST00000563790 TCEAL7Q9BRU2 100 aa5.85□□□□□ -1.47
HDGFL3-204ENST00000563790 F5H697 171 aa5.84□□□□□ -1.47
HDGFL3-204ENST00000563790 S100ZQ8WXG8 99 aa5.84□□□□□ -1.47
HDGFL3-204ENST00000563790 TMEM243Q9BU79 118 aa5.84□□□□□ -1.47
HDGFL3-204ENST00000563790 MAP1LC3B2A6NCE7 125 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 G3V3Q6 166 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 ZNF561-AS1K7EIQ3 104 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 MT2AP02795 61 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 NKX2-5P52952 324 aaPredicted RBP5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 PTTG1IPP53801 180 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 FOXI1Q12951 378 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 SPANXN1Q5VSR9 72 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 AP1S3Q96PC3 154 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 MAP1LC3BQ9GZQ8 125 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 MED28Q9H204 178 aa5.83□□□□□ -1.48
HDGFL3-204ENST00000563790 A0A087WZ39 114 aa5.82□□□□□ -1.48
HDGFL3-204ENST00000563790 AKR1C3P42330 323 aa5.82□□□□□ -1.48
HDGFL3-204ENST00000563790 SSTP61278 116 aa5.82□□□□□ -1.48
HDGFL3-204ENST00000563790 KRTAP11-1Q8IUC1 163 aa5.82□□□□□ -1.48
HDGFL3-204ENST00000563790 CHCHD10Q8WYQ3 142 aaPredicted RBP5.82□□□□□ -1.48
HDGFL3-204ENST00000563790 CYTL1Q9NRR1 136 aa5.82□□□□□ -1.48
HDGFL3-204ENST00000563790 ALG5Q9Y673 324 aa5.82□□□□□ -1.48
HDGFL3-204ENST00000563790 PAGE4O60829 102 aa5.81□□□□□ -1.48
HDGFL3-204ENST00000563790 LINC00526Q96FQ7 95 aa5.81□□□□□ -1.48
HDGFL3-204ENST00000563790 SULT1A2P50226 295 aa5.8□□□□□ -1.48
HDGFL3-204ENST00000563790 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
HDGFL3-204ENST00000563790 CST9LP1Q5W188 147 aa5.8□□□□□ -1.48
HDGFL3-204ENST00000563790 CFAP161Q6P656 301 aa5.8□□□□□ -1.48
HDGFL3-204ENST00000563790 RASL11AQ6T310 242 aa5.8□□□□□ -1.48
HDGFL3-204ENST00000563790 BAGE2Q86Y30 109 aa5.8□□□□□ -1.48
HDGFL3-204ENST00000563790 OPRPNQ99935 248 aaPredicted RBP5.8□□□□□ -1.48
HDGFL3-204ENST00000563790 NIT2Q9NQR4 276 aa5.8□□□□□ -1.48
HDGFL3-204ENST00000563790 C19orf71A6NCJ1 209 aa5.79□□□□□ -1.48
HDGFL3-204ENST00000563790 MT1FP04733 61 aa5.79□□□□□ -1.48
HDGFL3-204ENST00000563790 MGPP08493 103 aa5.79□□□□□ -1.48
HDGFL3-204ENST00000563790 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
HDGFL3-204ENST00000563790 C9orf116Q5BN46 136 aaPredicted RBP5.79□□□□□ -1.48
HDGFL3-204ENST00000563790 Q6ZNX1 250 aa5.79□□□□□ -1.48
HDGFL3-204ENST00000563790 BORCS7-ASMTA0A0B4J1R7 106 aa5.78□□□□□ -1.48
HDGFL3-204ENST00000563790 S100A9P06702 114 aaKnown RBP5.78□□□□□ -1.48
HDGFL3-204ENST00000563790 SMIM17P0DL12 118 aa5.78□□□□□ -1.48
HDGFL3-204ENST00000563790 NTF3P20783 257 aa5.78□□□□□ -1.48
HDGFL3-204ENST00000563790 AKR1C8PQ5T2L2 129 aa5.78□□□□□ -1.48
HDGFL3-204ENST00000563790 STOML3Q8TAV4 291 aa5.78□□□□□ -1.48
HDGFL3-204ENST00000563790 MBD3L1Q8WWY6 194 aa5.78□□□□□ -1.48
HDGFL3-204ENST00000563790 IGKV3OR2-268A0A0C4DH90 116 aa5.77□□□□□ -1.49
HDGFL3-204ENST00000563790 GIPP09681 153 aaPredicted RBP5.77□□□□□ -1.49
HDGFL3-204ENST00000563790 COTL1Q14019 142 aa5.77□□□□□ -1.49
HDGFL3-204ENST00000563790 GATD1Q8NB37 220 aa5.77□□□□□ -1.49
HDGFL3-204ENST00000563790 C11orf52Q96A22 123 aa5.77□□□□□ -1.49
HDGFL3-204ENST00000563790 CARD19Q96LW7 228 aa5.77□□□□□ -1.49
HDGFL3-204ENST00000563790 CNFNQ9BYD5 112 aa5.77□□□□□ -1.49
HDGFL3-204ENST00000563790 TRBV20OR9-2A0A075B6H5 130 aa5.76□□□□□ -1.49
HDGFL3-204ENST00000563790 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.76□□□□□ -1.49
HDGFL3-204ENST00000563790 IGKV2-29A2NJV5 120 aaPredicted RBP5.76□□□□□ -1.49
HDGFL3-204ENST00000563790 RPL35P42766 123 aaKnown RBP5.76□□□□□ -1.49
HDGFL3-204ENST00000563790 TMUB2Q71RG4 321 aa5.76□□□□□ -1.49
HDGFL3-204ENST00000563790 FXYD6-FXYD2A0A087WZ82 144 aa5.75□□□□□ -1.49
HDGFL3-204ENST00000563790 LINC00959A0A1B0GUT2 108 aa5.75□□□□□ -1.49
HDGFL3-204ENST00000563790 UBE2L6O14933 153 aa5.75□□□□□ -1.49
HDGFL3-204ENST00000563790 FGF6P10767 208 aa5.75□□□□□ -1.49
HDGFL3-204ENST00000563790 CTRLP40313 264 aa5.75□□□□□ -1.49
HDGFL3-204ENST00000563790 LYZL1Q6UWQ5 148 aa5.75□□□□□ -1.49
HDGFL3-204ENST00000563790 OR5A1Q8NGJ0 315 aa5.75□□□□□ -1.49
HDGFL3-204ENST00000563790 BATF3Q9NR55 127 aa5.75□□□□□ -1.49
HDGFL3-204ENST00000563790 IGHV1-58A0A0C4DH39 117 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 H7C423 109 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 CCL25O15444 150 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 ESDP10768 282 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 XCL1P47992 114 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 DEFA1P59665 94 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 MEF2BQ02080 365 aaPredicted RBP5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 SYCNQ0VAF6 134 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 GAGE2BQ13066 116 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 EIF5AL1Q6IS14 154 aaKnown RBP5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 C9orf62Q8N4C0 152 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 NUP35Q8NFH5 326 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 OR2D3Q8NGH3 330 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 RPL39LQ96EH5 51 aaKnown RBP5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 TPPP3Q9BW30 176 aa5.74□□□□□ -1.49
HDGFL3-204ENST00000563790 A0A1B0GV50 99 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 ZNF861PO60384 105 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 NCR2O95944 276 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 BCL2P10415 239 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 FOXA3P55318 350 aaPredicted RBP5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 CCL20P78556 96 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 CENPWQ5EE01 88 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 KRTAP7-1Q8IUC3 87 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 NUDT10Q8NFP7 164 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 SFT2D1Q8WV19 159 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 NUDT11Q96G61 164 aa5.73□□□□□ -1.49
HDGFL3-204ENST00000563790 IGLV4-69A0A075B6H9 119 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms