RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 PCLOQ9Y6V0 5065 aa13.24□□□□□ -0.29
CMTM3-206ENST00000563672 IGKV3OR2-268A0A0C4DH90 116 aa13.23□□□□□ -0.29
CMTM3-206ENST00000563672 PRSS1P07477 247 aa13.23□□□□□ -0.29
CMTM3-206ENST00000563672 PRELID3AQ96N28 172 aa13.23□□□□□ -0.29
CMTM3-206ENST00000563672 CDC42SE2Q9NRR3 84 aa13.23□□□□□ -0.29
CMTM3-206ENST00000563672 ABCA13Q86UQ4 5058 aa13.22□□□□□ -0.29
CMTM3-206ENST00000563672 TCAPO15273 167 aa13.22□□□□□ -0.29
CMTM3-206ENST00000563672 Q8N1X5 172 aa13.22□□□□□ -0.29
CMTM3-206ENST00000563672 CARHSP1Q9Y2V2 147 aaKnown RBP13.22□□□□□ -0.29
CMTM3-206ENST00000563672 CSDC2Q9Y534 153 aaKnown RBP13.22□□□□□ -0.29
CMTM3-206ENST00000563672 KRTAP4-5Q9BYR2 181 aa13.21□□□□□ -0.29
CMTM3-206ENST00000563672 FAM30AQ9NZY2 134 aa13.21□□□□□ -0.29
CMTM3-206ENST00000563672 TRAV9-1A0A075B6T8 112 aa13.2□□□□□ -0.3
CMTM3-206ENST00000563672 GAGE12HA6NDE8 117 aa13.2□□□□□ -0.3
CMTM3-206ENST00000563672 PRSS47A8MTI9 375 aa13.2□□□□□ -0.3
CMTM3-206ENST00000563672 LINC01620Q4KN68 170 aa13.2□□□□□ -0.3
CMTM3-206ENST00000563672 ZNF664Q8N3J9 261 aa13.2□□□□□ -0.3
CMTM3-206ENST00000563672 CLRN3Q8NCR9 226 aa13.2□□□□□ -0.3
CMTM3-206ENST00000563672 CHCHD10Q8WYQ3 142 aaPredicted RBP13.2□□□□□ -0.3
CMTM3-206ENST00000563672 LAMTOR2Q9Y2Q5 125 aa13.2□□□□□ -0.3
CMTM3-206ENST00000563672 UBE2D4Q9Y2X8 147 aa13.2□□□□□ -0.3
CMTM3-206ENST00000563672 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
CMTM3-206ENST00000563672 Q6ZSA8 131 aa13.19□□□□□ -0.3
CMTM3-206ENST00000563672 TIMM21Q9BVV7 248 aa13.19□□□□□ -0.3
CMTM3-206ENST00000563672 FAT1Q14517 4588 aa13.19□□□□□ -0.3
CMTM3-206ENST00000563672 LINC00959A0A1B0GUT2 108 aa13.18□□□□□ -0.3
CMTM3-206ENST00000563672 SMAGPQ0VAQ4 97 aa13.18□□□□□ -0.3
CMTM3-206ENST00000563672 TMEM18Q96B42 140 aa13.18□□□□□ -0.3
CMTM3-206ENST00000563672 FOXI1Q12951 378 aa13.16□□□□□ -0.3
CMTM3-206ENST00000563672 RHEBQ15382 184 aa13.16□□□□□ -0.3
CMTM3-206ENST00000563672 S100PP25815 95 aa13.15□□□□□ -0.3
CMTM3-206ENST00000563672 RPL39P62891 51 aaKnown RBP13.15□□□□□ -0.3
CMTM3-206ENST00000563672 HAMPP81172 84 aa13.15□□□□□ -0.3
CMTM3-206ENST00000563672 hDV102S1A0JD36 115 aa13.14□□□□□ -0.31
CMTM3-206ENST00000563672 CCL25O15444 150 aa13.14□□□□□ -0.31
CMTM3-206ENST00000563672 C15orf56Q8N910 161 aa13.14□□□□□ -0.31
CMTM3-206ENST00000563672 MAP1LC3AQ9H492 121 aa13.14□□□□□ -0.31
CMTM3-206ENST00000563672 LOC389332A0A1B0GUA5 103 aa13.13□□□□□ -0.31
CMTM3-206ENST00000563672 RAB5AP20339 215 aa13.13□□□□□ -0.31
CMTM3-206ENST00000563672 XCL1P47992 114 aa13.13□□□□□ -0.31
CMTM3-206ENST00000563672 CNBPP62633 177 aaKnown RBP13.13□□□□□ -0.31
CMTM3-206ENST00000563672 SS18Q15532 418 aa13.13□□□□□ -0.31
CMTM3-206ENST00000563672 CFAP161Q6P656 301 aa13.13□□□□□ -0.31
CMTM3-206ENST00000563672 C9orf163Q8N9P6 203 aa13.13□□□□□ -0.31
CMTM3-206ENST00000563672 FAM104AQ969W3 186 aa13.13□□□□□ -0.31
CMTM3-206ENST00000563672 RPS10P5Q9NQ39 176 aa13.13□□□□□ -0.31
CMTM3-206ENST00000563672 Q6ZUT4 128 aa13.12□□□□□ -0.31
CMTM3-206ENST00000563672 Q8N8P6 123 aa13.12□□□□□ -0.31
CMTM3-206ENST00000563672 SPANXA1Q9NS26 97 aa13.12□□□□□ -0.31
CMTM3-206ENST00000563672 SLPIP03973 132 aa13.11□□□□□ -0.31
CMTM3-206ENST00000563672 RNASE13Q5GAN3 156 aaKnown RBP13.11□□□□□ -0.31
CMTM3-206ENST00000563672 CD164L2Q6UWJ8 174 aa13.11□□□□□ -0.31
CMTM3-206ENST00000563672 GNB1LQ9BYB4 327 aa13.11□□□□□ -0.31
CMTM3-206ENST00000563672 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
CMTM3-206ENST00000563672 AP5S1Q9NUS5 200 aa13.1□□□□□ -0.31
CMTM3-206ENST00000563672 SMR3BP02814 79 aaPredicted RBP13.09□□□□□ -0.31
CMTM3-206ENST00000563672 MRPS36P82909 103 aaKnown RBP13.09□□□□□ -0.31
CMTM3-206ENST00000563672 KIAA1644Q3SXP7 199 aa13.09□□□□□ -0.31
CMTM3-206ENST00000563672 VPS13BQ7Z7G8 4022 aa13.09□□□□□ -0.31
CMTM3-206ENST00000563672 GVQW2A0A096LPI5 108 aaPredicted RBP13.08□□□□□ -0.32
CMTM3-206ENST00000563672 APOC3P02656 99 aa13.08□□□□□ -0.32
CMTM3-206ENST00000563672 COX19Q49B96 90 aa13.08□□□□□ -0.32
CMTM3-206ENST00000563672 OPRPNQ99935 248 aaPredicted RBP13.08□□□□□ -0.32
CMTM3-206ENST00000563672 PYGO1Q9Y3Y4 419 aa13.08□□□□□ -0.32
CMTM3-206ENST00000563672 TRAV13-1A0A0B4J241 112 aa13.07□□□□□ -0.32
CMTM3-206ENST00000563672 EPM2AB3EWF7 344 aa13.07□□□□□ -0.32
CMTM3-206ENST00000563672 K7EMI3 77 aa13.07□□□□□ -0.32
CMTM3-206ENST00000563672 SDIM1Q6ZPB5 146 aa13.07□□□□□ -0.32
CMTM3-206ENST00000563672 CHAC1Q9BUX1 264 aa13.07□□□□□ -0.32
CMTM3-206ENST00000563672 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
CMTM3-206ENST00000563672 SCXQ7RTU7 201 aa13.06□□□□□ -0.32
CMTM3-206ENST00000563672 SVBPQ8N300 66 aa13.06□□□□□ -0.32
CMTM3-206ENST00000563672 NXT2Q9NPJ8 142 aaKnown RBP13.06□□□□□ -0.32
CMTM3-206ENST00000563672 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.05□□□□□ -0.32
CMTM3-206ENST00000563672 IGHV1-58A0A0C4DH39 117 aa13.05□□□□□ -0.32
CMTM3-206ENST00000563672 IFI27P40305 119 aaPredicted RBP13.05□□□□□ -0.32
CMTM3-206ENST00000563672 NDUFA5Q16718 116 aa13.05□□□□□ -0.32
CMTM3-206ENST00000563672 SNAPINO95295 136 aa13.04□□□□□ -0.32
CMTM3-206ENST00000563672 MT-ND6P03923 174 aa13.04□□□□□ -0.32
CMTM3-206ENST00000563672 ORMDL2Q53FV1 153 aa13.04□□□□□ -0.32
CMTM3-206ENST00000563672 Q5VSD8 79 aa13.03□□□□□ -0.32
CMTM3-206ENST00000563672 C2orf66Q6UXQ4 117 aa13.03□□□□□ -0.32
CMTM3-206ENST00000563672 ALKBH7Q9BT30 221 aaPredicted RBP13.03□□□□□ -0.32
CMTM3-206ENST00000563672 CYSLTR1Q9Y271 337 aa13.03□□□□□ -0.32
CMTM3-206ENST00000563672 IGLV4-3A0A075B6K6 122 aa13.02□□□□□ -0.33
CMTM3-206ENST00000563672 IGHV3-64A0A075B6Q5 118 aa13.02□□□□□ -0.33
CMTM3-206ENST00000563672 COX7A2LO14548 114 aa13.02□□□□□ -0.33
CMTM3-206ENST00000563672 CIRBP-AS1Q8TBR5 109 aa13.02□□□□□ -0.33
CMTM3-206ENST00000563672 MRPL18Q9H0U6 180 aaKnown RBP13.02□□□□□ -0.33
CMTM3-206ENST00000563672 TGIF2-C20orf24A0A0A6YYL0 155 aa13.01□□□□□ -0.33
CMTM3-206ENST00000563672 FAM229AH3BQW9 127 aa13.01□□□□□ -0.33
CMTM3-206ENST00000563672 IFITM10A6NMD0 228 aa13□□□□□ -0.33
CMTM3-206ENST00000563672 FABP9Q0Z7S8 132 aa13□□□□□ -0.33
CMTM3-206ENST00000563672 TMEM141Q96I45 108 aa13□□□□□ -0.33
CMTM3-206ENST00000563672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
CMTM3-206ENST00000563672 PANO1I0J062 215 aa12.99□□□□□ -0.33
CMTM3-206ENST00000563672 MALP21145 153 aa12.99□□□□□ -0.33
CMTM3-206ENST00000563672 C5orf38Q86SI9 138 aa12.99□□□□□ -0.33
CMTM3-206ENST00000563672 SRRM2Q9UQ35 2752 aaKnown RBP12.99□□□□□ -0.33
CMTM3-206ENST00000563672 IGHV3OR16-9A0A0B4J2B5 98 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms