RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 SLPIP03973 132 aa9.02□□□□□ -0.97
SMPD3-204ENST00000563396 CHCHD10Q8WYQ3 142 aaPredicted RBP9.02□□□□□ -0.97
SMPD3-204ENST00000563396 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
SMPD3-204ENST00000563396 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
SMPD3-204ENST00000563396 A0A1B0GW15 77 aa9.01□□□□□ -0.97
SMPD3-204ENST00000563396 SMKR1H3BMG3 65 aa9.01□□□□□ -0.97
SMPD3-204ENST00000563396 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
SMPD3-204ENST00000563396 FOXI1Q12951 378 aa9.01□□□□□ -0.97
SMPD3-204ENST00000563396 FAM104BQ5XKR9 115 aa9.01□□□□□ -0.97
SMPD3-204ENST00000563396 BTF3L4Q96K17 158 aa9.01□□□□□ -0.97
SMPD3-204ENST00000563396 AP5S1Q9NUS5 200 aa9.01□□□□□ -0.97
SMPD3-204ENST00000563396 IGKV3OR2-268A0A0C4DH90 116 aa9□□□□□ -0.97
SMPD3-204ENST00000563396 MRPL51Q4U2R6 128 aaKnown RBP9□□□□□ -0.97
SMPD3-204ENST00000563396 CFAP161Q6P656 301 aa9□□□□□ -0.97
SMPD3-204ENST00000563396 TMEM101Q96IK0 257 aa9□□□□□ -0.97
SMPD3-204ENST00000563396 IGHV3-64A0A075B6Q5 118 aa8.99□□□□□ -0.97
SMPD3-204ENST00000563396 A0A1B0GXF2 115 aa8.99□□□□□ -0.97
SMPD3-204ENST00000563396 LINC00862A6NCI5 91 aa8.99□□□□□ -0.97
SMPD3-204ENST00000563396 VCYO14598 125 aa8.99□□□□□ -0.97
SMPD3-204ENST00000563396 PPP1R2P9O14990 202 aa8.99□□□□□ -0.97
SMPD3-204ENST00000563396 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
SMPD3-204ENST00000563396 CDC42SE2Q9NRR3 84 aa8.99□□□□□ -0.97
SMPD3-204ENST00000563396 CSDC2Q9Y534 153 aaKnown RBP8.99□□□□□ -0.97
SMPD3-204ENST00000563396 TRBV24-1A0A075B6N3 115 aa8.98□□□□□ -0.97
SMPD3-204ENST00000563396 LINC00959A0A1B0GUT2 108 aa8.98□□□□□ -0.97
SMPD3-204ENST00000563396 KRTAP29-1A8MX34 341 aaPredicted RBP8.98□□□□□ -0.97
SMPD3-204ENST00000563396 SPACA4Q8TDM5 124 aa8.98□□□□□ -0.97
SMPD3-204ENST00000563396 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
SMPD3-204ENST00000563396 PKHD1L1Q86WI1 4243 aa8.97□□□□□ -0.97
SMPD3-204ENST00000563396 HBBP68871 147 aa8.97□□□□□ -0.97
SMPD3-204ENST00000563396 KIR2DL4Q99706 377 aa8.97□□□□□ -0.97
SMPD3-204ENST00000563396 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
SMPD3-204ENST00000563396 UBE2D4Q9Y2X8 147 aa8.97□□□□□ -0.97
SMPD3-204ENST00000563396 CCL25O15444 150 aa8.96□□□□□ -0.98
SMPD3-204ENST00000563396 S100A8P05109 93 aa8.96□□□□□ -0.98
SMPD3-204ENST00000563396 FCER1GP30273 86 aa8.96□□□□□ -0.98
SMPD3-204ENST00000563396 XCL1P47992 114 aa8.96□□□□□ -0.98
SMPD3-204ENST00000563396 CAMPP49913 170 aa8.96□□□□□ -0.98
SMPD3-204ENST00000563396 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
SMPD3-204ENST00000563396 ZNF664Q8N3J9 261 aa8.96□□□□□ -0.98
SMPD3-204ENST00000563396 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.98
SMPD3-204ENST00000563396 RPL37AP61513 92 aaKnown RBP8.95□□□□□ -0.98
SMPD3-204ENST00000563396 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
SMPD3-204ENST00000563396 CD164L2Q6UWJ8 174 aa8.95□□□□□ -0.98
SMPD3-204ENST00000563396 ATP5L2Q7Z4Y8 100 aa8.95□□□□□ -0.98
SMPD3-204ENST00000563396 TIMM21Q9BVV7 248 aa8.95□□□□□ -0.98
SMPD3-204ENST00000563396 SMIM2Q9BVW6 85 aa8.95□□□□□ -0.98
SMPD3-204ENST00000563396 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
SMPD3-204ENST00000563396 F8W036 122 aa8.94□□□□□ -0.98
SMPD3-204ENST00000563396 PHOX2AO14813 284 aa8.94□□□□□ -0.98
SMPD3-204ENST00000563396 TCAPO15273 167 aa8.94□□□□□ -0.98
SMPD3-204ENST00000563396 CHTF8P0CG12 524 aa8.94□□□□□ -0.98
SMPD3-204ENST00000563396 PNRC1Q12796 327 aaPredicted RBP8.94□□□□□ -0.98
SMPD3-204ENST00000563396 SS18Q15532 418 aa8.94□□□□□ -0.98
SMPD3-204ENST00000563396 MRPL54Q6P161 138 aaKnown RBP8.94□□□□□ -0.98
SMPD3-204ENST00000563396 D6R8Y8 96 aa8.93□□□□□ -0.98
SMPD3-204ENST00000563396 TNFRSF6BO95407 300 aa8.93□□□□□ -0.98
SMPD3-204ENST00000563396 PPBPP02775 128 aa8.93□□□□□ -0.98
SMPD3-204ENST00000563396 CKS2P33552 79 aa8.93□□□□□ -0.98
SMPD3-204ENST00000563396 Q6ZUT4 128 aa8.93□□□□□ -0.98
SMPD3-204ENST00000563396 PLAC8Q9NZF1 115 aa8.93□□□□□ -0.98
SMPD3-204ENST00000563396 A0A087WYN8 130 aa8.92□□□□□ -0.98
SMPD3-204ENST00000563396 TMEM18Q96B42 140 aa8.92□□□□□ -0.98
SMPD3-204ENST00000563396 C1orf196B1AJZ1 125 aa8.91□□□□□ -0.98
SMPD3-204ENST00000563396 NPYP01303 97 aa8.91□□□□□ -0.98
SMPD3-204ENST00000563396 HNRNPA3P51991 378 aaKnown RBP8.91□□□□□ -0.98
SMPD3-204ENST00000563396 COX6A2Q02221 97 aa8.91□□□□□ -0.98
SMPD3-204ENST00000563396 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
SMPD3-204ENST00000563396 OXTP01178 125 aa8.9□□□□□ -0.98
SMPD3-204ENST00000563396 PRSS3P2Q8NHM4 247 aa8.9□□□□□ -0.98
SMPD3-204ENST00000563396 RAB14P61106 215 aa8.89□□□□□ -0.99
SMPD3-204ENST00000563396 RNASE13Q5GAN3 156 aaKnown RBP8.89□□□□□ -0.99
SMPD3-204ENST00000563396 CLLU1Q5K131 121 aa8.89□□□□□ -0.99
SMPD3-204ENST00000563396 ORMDL3Q8N138 153 aa8.89□□□□□ -0.99
SMPD3-204ENST00000563396 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
SMPD3-204ENST00000563396 ANAPC16Q96DE5 110 aa8.89□□□□□ -0.99
SMPD3-204ENST00000563396 CARD19Q96LW7 228 aa8.89□□□□□ -0.99
SMPD3-204ENST00000563396 SPANXA1Q9NS26 97 aa8.89□□□□□ -0.99
SMPD3-204ENST00000563396 A0A096LNI7 61 aa8.88□□□□□ -0.99
SMPD3-204ENST00000563396 COX7A2LO14548 114 aa8.88□□□□□ -0.99
SMPD3-204ENST00000563396 RPL39P62891 51 aaKnown RBP8.88□□□□□ -0.99
SMPD3-204ENST00000563396 MRPS36P82909 103 aaKnown RBP8.88□□□□□ -0.99
SMPD3-204ENST00000563396 PRSS47A8MTI9 375 aa8.87□□□□□ -0.99
SMPD3-204ENST00000563396 LINC00526Q96FQ7 95 aa8.87□□□□□ -0.99
SMPD3-204ENST00000563396 LINC00474Q9P2X8 69 aa8.87□□□□□ -0.99
SMPD3-204ENST00000563396 LAMTOR2Q9Y2Q5 125 aa8.87□□□□□ -0.99
SMPD3-204ENST00000563396 TRAV13-1A0A0B4J241 112 aa8.86□□□□□ -0.99
SMPD3-204ENST00000563396 IGKV2-24A0A0C4DH68 120 aa8.86□□□□□ -0.99
SMPD3-204ENST00000563396 ZNF561-AS1K7EIQ3 104 aa8.86□□□□□ -0.99
SMPD3-204ENST00000563396 MT-ND4LP03901 98 aa8.86□□□□□ -0.99
SMPD3-204ENST00000563396 SYCNQ0VAF6 134 aa8.86□□□□□ -0.99
SMPD3-204ENST00000563396 PRELID3AQ96N28 172 aa8.86□□□□□ -0.99
SMPD3-204ENST00000563396 MAJINQ3KP22 176 aa8.85□□□□□ -0.99
SMPD3-204ENST00000563396 TMEM136Q6ZRR5 245 aa8.85□□□□□ -0.99
SMPD3-204ENST00000563396 IGLV4-69A0A075B6H9 119 aa8.84□□□□□ -0.99
SMPD3-204ENST00000563396 IGHV3OR16-9A0A0B4J2B5 98 aa8.84□□□□□ -0.99
SMPD3-204ENST00000563396 MALP21145 153 aa8.84□□□□□ -0.99
SMPD3-204ENST00000563396 STPG4Q8N801 248 aa8.84□□□□□ -0.99
SMPD3-204ENST00000563396 C7orf33Q8WU49 177 aa8.84□□□□□ -0.99
SMPD3-204ENST00000563396 C2orf48Q96LS8 159 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms