RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	CAMP	P49913	170 aa		4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	GAGE2B	Q13066	116 aa		4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	AKR1C8P	Q5T2L2	129 aa		4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	AMMECR1L	Q6DCA0	310 aa		4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	CD164L2	Q6UWJ8	174 aa		4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	TMUB2	Q71RG4	321 aa		4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	PHF5A	Q7RTV0	110 aa	Known RBP	4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	GATD1	Q8NB37	220 aa		4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	IGLV4-69	A0A075B6H9	119 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	ZNF561-AS1	K7EIQ3	104 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	BCL2	P10415	239 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	ESD	P10768	282 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	RPL13A	P40429	203 aa	Known RBP	4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	RPS20	P60866	119 aa	Known RBP	4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	RNASEK	Q6P5S7	137 aa	Known RBP	4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	C9orf62	Q8N4C0	152 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	MBD3L1	Q8WWY6	194 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	C11orf52	Q96A22	123 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	ISOC2	Q96AB3	205 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	CYTL1	Q9NRR1	136 aa		4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.95	□□□□□ -1.62
CKLF-208	ENST00000563092	CTRL	P40313	264 aa		4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	RPL35	P42766	123 aa	Known RBP	4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	RNF151	Q2KHN1	245 aa		4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	LYZL1	Q6UWQ5	148 aa		4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	MRPL52	Q86TS9	123 aa	Known RBP	4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	OR2D3	Q8NGH3	330 aa		4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	C2orf48	Q96LS8	159 aa		4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	TPPP3	Q9BW30	176 aa		4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	CDC42SE2	Q9NRR3	84 aa		4.94	□□□□□ -1.62
CKLF-208	ENST00000563092	ALG5	Q9Y673	324 aa		4.94	□□□□□ -1.62
CKLF-208	ENST00000563092		G3V3Q6	166 aa		4.93	□□□□□ -1.62
CKLF-208	ENST00000563092	APCS	P02743	223 aa		4.93	□□□□□ -1.62
CKLF-208	ENST00000563092	RPL39L	Q96EH5	51 aa	Known RBP	4.93	□□□□□ -1.62
CKLF-208	ENST00000563092	SMIM12	Q96EX1	92 aa		4.93	□□□□□ -1.62
CKLF-208	ENST00000563092	FAM210A	Q96ND0	272 aa		4.93	□□□□□ -1.62
CKLF-208	ENST00000563092	MUC17	Q685J3	4493 aa		4.93	□□□□□ -1.62
CKLF-208	ENST00000563092	TRAV1-1	A0A0B4J248	108 aa		4.92	□□□□□ -1.62
CKLF-208	ENST00000563092	TRBV6-5	A0A0K0K1A5	114 aa		4.92	□□□□□ -1.62
CKLF-208	ENST00000563092	SDHAF1	A6NFY7	115 aa		4.92	□□□□□ -1.62
CKLF-208	ENST00000563092	BCL2L11	O43521	198 aa		4.92	□□□□□ -1.62
CKLF-208	ENST00000563092	GIP	P09681	153 aa	Predicted RBP	4.92	□□□□□ -1.62
CKLF-208	ENST00000563092	SS18	Q15532	418 aa		4.92	□□□□□ -1.62
CKLF-208	ENST00000563092	KRTAP7-1	Q8IUC3	87 aa		4.92	□□□□□ -1.62
CKLF-208	ENST00000563092	TSKU	Q8WUA8	353 aa		4.92	□□□□□ -1.62
CKLF-208	ENST00000563092	RPP21	Q9H633	154 aa	Known RBP	4.92	□□□□□ -1.62
CKLF-208	ENST00000563092		A0A087WZ39	114 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	XKRY2	A2RUG3	117 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092		I3L3M4	83 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	PFDN1	O60925	122 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	TSHB	P01222	138 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	TLX1NB	P0CAT3	122 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	DEFA1	P59665	94 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	EIF5A	P63241	154 aa	Known RBP	4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	CENPW	Q5EE01	88 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	EIF5AL1	Q6IS14	154 aa	Known RBP	4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	SFT2D1	Q8WV19	159 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	TMEM101	Q96IK0	257 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	BTF3L4	Q96K17	158 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	CAMK2N2	Q96S95	79 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	CRCT1	Q9UGL9	99 aa		4.91	□□□□□ -1.62
CKLF-208	ENST00000563092	TRBV20OR9-2	A0A075B6H5	130 aa		4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	FAM168B	A1KXE4	195 aa		4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	COX7A2L	O14548	114 aa		4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	IFNA1	P01562	189 aa		4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	UBE2D1	P51668	147 aa		4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	RPL18A	Q02543	176 aa	Known RBP	4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	TEX261	Q6UWH6	196 aa		4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	KCNRG	Q8N5I3	272 aa		4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	OPRPN	Q99935	248 aa	Predicted RBP	4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	MRPL35	Q9NZE8	188 aa	Known RBP	4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	CSDC2	Q9Y534	153 aa	Known RBP	4.9	□□□□□ -1.63
CKLF-208	ENST00000563092	FXYD6-FXYD2	A0A087WZ82	144 aa		4.89	□□□□□ -1.63
CKLF-208	ENST00000563092	C1orf196	B1AJZ1	125 aa		4.89	□□□□□ -1.63
CKLF-208	ENST00000563092	UMAD1	C9J7I0	102 aa		4.89	□□□□□ -1.63
CKLF-208	ENST00000563092		F8WDY8	70 aa		4.89	□□□□□ -1.63
CKLF-208	ENST00000563092	FOXA3	P55318	350 aa	Predicted RBP	4.89	□□□□□ -1.63
CKLF-208	ENST00000563092	CCL20	P78556	96 aa		4.89	□□□□□ -1.63
CKLF-208	ENST00000563092	TWIST1	Q15672	202 aa		4.89	□□□□□ -1.63
CKLF-208	ENST00000563092	MRAP2	Q96G30	205 aa		4.89	□□□□□ -1.63
CKLF-208	ENST00000563092	TRBV27	A0A0K0K1C4	114 aa		4.88	□□□□□ -1.63
CKLF-208	ENST00000563092	RAB19	A4D1S5	217 aa		4.88	□□□□□ -1.63
CKLF-208	ENST00000563092	PMCH	P20382	165 aa		4.88	□□□□□ -1.63
CKLF-208	ENST00000563092	MAL	P21145	153 aa		4.88	□□□□□ -1.63
CKLF-208	ENST00000563092	POLR2K	P53803	58 aa	Known RBP	4.88	□□□□□ -1.63
CKLF-208	ENST00000563092	TPRXL	Q17RH7	258 aa		4.88	□□□□□ -1.63
CKLF-208	ENST00000563092	OR10D4P	Q8NGN7	298 aa		4.88	□□□□□ -1.63
CKLF-208	ENST00000563092	FAM213B	Q8TBF2	198 aa		4.88	□□□□□ -1.63
CKLF-208	ENST00000563092		A0A1B0GV50	99 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	GNG4	P50150	75 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	SPAG11B	Q08648	103 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	C10orf25	Q5T742	122 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	NUDT10	Q8NFP7	164 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	NUDT11	Q96G61	164 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	IMMP2L	Q96T52	175 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	RNASE7	Q9H1E1	156 aa	Known RBP	4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	MANBAL	Q9NQG1	85 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092	TMEM242	Q9NWH2	141 aa		4.87	□□□□□ -1.63
CKLF-208	ENST00000563092		A0A087X002	238 aa		4.86	□□□□□ -1.63
CKLF-208	ENST00000563092	ZNF861P	O60384	105 aa		4.86	□□□□□ -1.63

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