RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 TMEM218A2RU14 115 aa12.08□□□□□ -0.48
MAP1LC3B-203ENST00000562778 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
MAP1LC3B-203ENST00000562778 NAT8BQ9UHF3 227 aa12.08□□□□□ -0.48
MAP1LC3B-203ENST00000562778 HIGD2BQ4VC39 106 aa12.07□□□□□ -0.48
MAP1LC3B-203ENST00000562778 TRBV27A0A0K0K1C4 114 aa12.06□□□□□ -0.48
MAP1LC3B-203ENST00000562778 SMIM27A0A1W2PRY6 76 aa12.06□□□□□ -0.48
MAP1LC3B-203ENST00000562778 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
MAP1LC3B-203ENST00000562778 ZNF25P17030 456 aaPredicted RBP12.06□□□□□ -0.48
MAP1LC3B-203ENST00000562778 CAMPP49913 170 aa12.06□□□□□ -0.48
MAP1LC3B-203ENST00000562778 NRACQ8N912 160 aa12.06□□□□□ -0.48
MAP1LC3B-203ENST00000562778 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
MAP1LC3B-203ENST00000562778 XCL1P47992 114 aa12.05□□□□□ -0.48
MAP1LC3B-203ENST00000562778 FOXI1Q12951 378 aa12.05□□□□□ -0.48
MAP1LC3B-203ENST00000562778 TMEM101Q96IK0 257 aa12.05□□□□□ -0.48
MAP1LC3B-203ENST00000562778 BTF3L4Q96K17 158 aa12.05□□□□□ -0.48
MAP1LC3B-203ENST00000562778 IGHV3-64A0A075B6Q5 118 aa12.04□□□□□ -0.48
MAP1LC3B-203ENST00000562778 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
MAP1LC3B-203ENST00000562778 J3QL48 77 aa12.04□□□□□ -0.48
MAP1LC3B-203ENST00000562778 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
MAP1LC3B-203ENST00000562778 FAM104BQ5XKR9 115 aa12.04□□□□□ -0.48
MAP1LC3B-203ENST00000562778 LINC00959A0A1B0GUT2 108 aa12.03□□□□□ -0.48
MAP1LC3B-203ENST00000562778 F8W036 122 aa12.03□□□□□ -0.48
MAP1LC3B-203ENST00000562778 ADCYAP1P18509 176 aa12.03□□□□□ -0.48
MAP1LC3B-203ENST00000562778 CFAP161Q6P656 301 aa12.03□□□□□ -0.48
MAP1LC3B-203ENST00000562778 C7orf77A4D0Y5 90 aa12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 VCYO14598 125 aa12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 CCL25O15444 150 aa12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 FCER1GP30273 86 aa12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 RPL37AP61513 92 aaKnown RBP12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 SUMO2P61956 95 aaKnown RBP12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 SEC11CQ9BY50 192 aa12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 CARHSP1Q9Y2V2 147 aaKnown RBP12.02□□□□□ -0.49
MAP1LC3B-203ENST00000562778 HNRNPA3P51991 378 aaKnown RBP12.01□□□□□ -0.49
MAP1LC3B-203ENST00000562778 MRPL54Q6P161 138 aaKnown RBP12.01□□□□□ -0.49
MAP1LC3B-203ENST00000562778 MRPL52Q86TS9 123 aaKnown RBP12.01□□□□□ -0.49
MAP1LC3B-203ENST00000562778 GVQW2A0A096LPI5 108 aaPredicted RBP12□□□□□ -0.49
MAP1LC3B-203ENST00000562778 KRTAP29-1A8MX34 341 aaPredicted RBP12□□□□□ -0.49
MAP1LC3B-203ENST00000562778 C10orf91Q5T1B1 145 aa12□□□□□ -0.49
MAP1LC3B-203ENST00000562778 ZNF664Q8N3J9 261 aa12□□□□□ -0.49
MAP1LC3B-203ENST00000562778 LINC00526Q96FQ7 95 aa12□□□□□ -0.49
MAP1LC3B-203ENST00000562778 DPH3Q96FX2 82 aa12□□□□□ -0.49
MAP1LC3B-203ENST00000562778 APOC3P02656 99 aa11.99□□□□□ -0.49
MAP1LC3B-203ENST00000562778 COX6A2Q02221 97 aa11.99□□□□□ -0.49
MAP1LC3B-203ENST00000562778 RNASE13Q5GAN3 156 aaKnown RBP11.99□□□□□ -0.49
MAP1LC3B-203ENST00000562778 A0A087WYN8 130 aa11.98□□□□□ -0.49
MAP1LC3B-203ENST00000562778 PPP1R17O96001 155 aa11.98□□□□□ -0.49
MAP1LC3B-203ENST00000562778 CKS2P33552 79 aa11.98□□□□□ -0.49
MAP1LC3B-203ENST00000562778 PRSS3P2Q8NHM4 247 aa11.98□□□□□ -0.49
MAP1LC3B-203ENST00000562778 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
MAP1LC3B-203ENST00000562778 SS18Q15532 418 aa11.97□□□□□ -0.49
MAP1LC3B-203ENST00000562778 KIR2DL4Q99706 377 aa11.97□□□□□ -0.49
MAP1LC3B-203ENST00000562778 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
MAP1LC3B-203ENST00000562778 A0A1B0GW15 77 aa11.96□□□□□ -0.49
MAP1LC3B-203ENST00000562778 A0A1B0GXF2 115 aa11.96□□□□□ -0.49
MAP1LC3B-203ENST00000562778 D6R8Y8 96 aa11.96□□□□□ -0.49
MAP1LC3B-203ENST00000562778 HBBP68871 147 aa11.96□□□□□ -0.49
MAP1LC3B-203ENST00000562778 SVBPQ8N300 66 aa11.96□□□□□ -0.49
MAP1LC3B-203ENST00000562778 IGKV2-24A0A0C4DH68 120 aa11.95□□□□□ -0.5
MAP1LC3B-203ENST00000562778 PPP1R2P9O14990 202 aa11.95□□□□□ -0.5
MAP1LC3B-203ENST00000562778 TNFRSF6BO95407 300 aa11.95□□□□□ -0.5
MAP1LC3B-203ENST00000562778 CD164L2Q6UWJ8 174 aa11.95□□□□□ -0.5
MAP1LC3B-203ENST00000562778 C20orf78Q9BR46 151 aa11.95□□□□□ -0.5
MAP1LC3B-203ENST00000562778 TRBV24-1A0A075B6N3 115 aa11.94□□□□□ -0.5
MAP1LC3B-203ENST00000562778 IGHV1-58A0A0C4DH39 117 aa11.94□□□□□ -0.5
MAP1LC3B-203ENST00000562778 Q6ZUT4 128 aa11.94□□□□□ -0.5
MAP1LC3B-203ENST00000562778 SNAPINO95295 136 aa11.93□□□□□ -0.5
MAP1LC3B-203ENST00000562778 NPYP01303 97 aa11.93□□□□□ -0.5
MAP1LC3B-203ENST00000562778 RPL39P62891 51 aaKnown RBP11.93□□□□□ -0.5
MAP1LC3B-203ENST00000562778 A0A096LNI7 61 aa11.92□□□□□ -0.5
MAP1LC3B-203ENST00000562778 TRAV13-1A0A0B4J241 112 aa11.92□□□□□ -0.5
MAP1LC3B-203ENST00000562778 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
MAP1LC3B-203ENST00000562778 SMIM2Q9BVW6 85 aa11.92□□□□□ -0.5
MAP1LC3B-203ENST00000562778 PLAC8Q9NZF1 115 aa11.92□□□□□ -0.5
MAP1LC3B-203ENST00000562778 CSDC2Q9Y534 153 aaKnown RBP11.92□□□□□ -0.5
MAP1LC3B-203ENST00000562778 S100A8P05109 93 aa11.91□□□□□ -0.5
MAP1LC3B-203ENST00000562778 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
MAP1LC3B-203ENST00000562778 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
MAP1LC3B-203ENST00000562778 TCAPO15273 167 aa11.9□□□□□ -0.5
MAP1LC3B-203ENST00000562778 FAM104AQ969W3 186 aa11.9□□□□□ -0.5
MAP1LC3B-203ENST00000562778 CARD19Q96LW7 228 aa11.9□□□□□ -0.5
MAP1LC3B-203ENST00000562778 OPRPNQ99935 248 aaPredicted RBP11.9□□□□□ -0.5
MAP1LC3B-203ENST00000562778 ZNF561-AS1K7EIQ3 104 aa11.89□□□□□ -0.51
MAP1LC3B-203ENST00000562778 SMAGPQ0VAQ4 97 aa11.89□□□□□ -0.51
MAP1LC3B-203ENST00000562778 PNRC1Q12796 327 aaPredicted RBP11.89□□□□□ -0.51
MAP1LC3B-203ENST00000562778 C5orf38Q86SI9 138 aa11.89□□□□□ -0.51
MAP1LC3B-203ENST00000562778 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
MAP1LC3B-203ENST00000562778 COX7A2LO14548 114 aa11.88□□□□□ -0.51
MAP1LC3B-203ENST00000562778 OXTP01178 125 aa11.88□□□□□ -0.51
MAP1LC3B-203ENST00000562778 MALP21145 153 aa11.88□□□□□ -0.51
MAP1LC3B-203ENST00000562778 STPG4Q8N801 248 aa11.88□□□□□ -0.51
MAP1LC3B-203ENST00000562778 TMEM18Q96B42 140 aa11.88□□□□□ -0.51
MAP1LC3B-203ENST00000562778 IGLV4-69A0A075B6H9 119 aa11.87□□□□□ -0.51
MAP1LC3B-203ENST00000562778 PHOX2AO14813 284 aa11.87□□□□□ -0.51
MAP1LC3B-203ENST00000562778 SYCNQ0VAF6 134 aa11.87□□□□□ -0.51
MAP1LC3B-203ENST00000562778 RHEBQ15382 184 aa11.87□□□□□ -0.51
MAP1LC3B-203ENST00000562778 TMEM136Q6ZRR5 245 aa11.87□□□□□ -0.51
MAP1LC3B-203ENST00000562778 ATP5L2Q7Z4Y8 100 aa11.87□□□□□ -0.51
MAP1LC3B-203ENST00000562778 SCO1O75880 301 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms