RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 AP3S1Q92572 193 aa3.11□□□□□ -1.91
UBR1-203ENST00000562173 SFRP2Q96HF1 295 aa3.11□□□□□ -1.91
UBR1-203ENST00000562173 TMEM101Q96IK0 257 aa3.11□□□□□ -1.91
UBR1-203ENST00000562173 LINC00167Q96N53 147 aa3.11□□□□□ -1.91
UBR1-203ENST00000562173 SCGB3A2Q96PL1 93 aa3.11□□□□□ -1.91
UBR1-203ENST00000562173 GGACTQ9BVM4 153 aa3.11□□□□□ -1.91
UBR1-203ENST00000562173 WDR61Q9GZS3 305 aaKnown RBP3.11□□□□□ -1.91
UBR1-203ENST00000562173 VCX3BQ9H321 246 aa3.11□□□□□ -1.91
UBR1-203ENST00000562173 LYRM2Q9NU23 88 aaPredicted RBP3.11□□□□□ -1.91
UBR1-203ENST00000562173 CACFD1Q9UGQ2 172 aa3.11□□□□□ -1.91
UBR1-203ENST00000562173 TRBV7-3A0A075B6L6 115 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 TRAV26-2A0A0B4J265 109 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 A0A0U1RQV1 116 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 A8MWV9 139 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 KRBOX1C9JBD0 128 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 SH2D1AO60880 128 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 TCRAP04437 139 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 ARL14EPLP0DKL9 152 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 S100A4P26447 101 aaKnown RBP3.1□□□□□ -1.91
UBR1-203ENST00000562173 RPS10P46783 165 aaKnown RBP3.1□□□□□ -1.91
UBR1-203ENST00000562173 ZNF56Q15929 161 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 C12orf45Q8N5I9 185 aaPredicted RBP3.1□□□□□ -1.91
UBR1-203ENST00000562173 DERL1Q9BUN8 251 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 LENEPQ9Y5L5 61 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 ARL2-SNX15V9GYD0 113 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 V9GYY9 64 aa3.1□□□□□ -1.91
UBR1-203ENST00000562173 TRBV6-1A0A0K0K1D8 114 aa3.09□□□□□ -1.91
UBR1-203ENST00000562173 B4DEV8 164 aa3.09□□□□□ -1.91
UBR1-203ENST00000562173 PLA2G10O15496 165 aa3.09□□□□□ -1.91
UBR1-203ENST00000562173 FGF8P55075 233 aaPredicted RBP3.09□□□□□ -1.91
UBR1-203ENST00000562173 FLI1Q01543 452 aaPredicted RBP3.09□□□□□ -1.91
UBR1-203ENST00000562173 ELOBQ15370 118 aa3.09□□□□□ -1.91
UBR1-203ENST00000562173 KRTAP13-3Q3SY46 172 aa3.09□□□□□ -1.91
UBR1-203ENST00000562173 CMTM2Q8TAZ6 248 aa3.09□□□□□ -1.91
UBR1-203ENST00000562173 PTH2Q96A98 100 aa3.09□□□□□ -1.91
UBR1-203ENST00000562173 CHCHD7Q9BUK0 85 aa3.09□□□□□ -1.91
UBR1-203ENST00000562173 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.08□□□□□ -1.92
UBR1-203ENST00000562173 A0A1B0GW15 77 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 IGKV2-29A2NJV5 120 aaPredicted RBP3.08□□□□□ -1.92
UBR1-203ENST00000562173 TAAR5O14804 337 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 SNAPINO95295 136 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 MT-ND6P03923 174 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 IGLV7-43P04211 117 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 GZMBP10144 247 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 UBE2G2P60604 165 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 ATP6V1FQ16864 119 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 SMUG1Q53HV7 270 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
UBR1-203ENST00000562173 S100A7AQ86SG5 101 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 Q86TA4 180 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 ZNF664Q8N3J9 261 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 HIST1H4GQ99525 98 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 SLC25A21Q9BQT8 299 aaPredicted RBP3.08□□□□□ -1.92
UBR1-203ENST00000562173 Q9H521 79 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 IL36BQ9NZH7 164 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 CBY1Q9Y3M2 126 aa3.08□□□□□ -1.92
UBR1-203ENST00000562173 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
UBR1-203ENST00000562173 S100A11P31949 105 aa3.07□□□□□ -1.92
UBR1-203ENST00000562173 NKX2-5P52952 324 aaPredicted RBP3.07□□□□□ -1.92
UBR1-203ENST00000562173 MT1HP80294 61 aa3.07□□□□□ -1.92
UBR1-203ENST00000562173 C5orf47Q569G3 176 aa3.07□□□□□ -1.92
UBR1-203ENST00000562173 OR10G9Q8NGN4 311 aa3.07□□□□□ -1.92
UBR1-203ENST00000562173 C15orf40Q8WUR7 153 aa3.07□□□□□ -1.92
UBR1-203ENST00000562173 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
UBR1-203ENST00000562173 PGLYRP4Q96LB8 373 aa3.07□□□□□ -1.92
UBR1-203ENST00000562173 SH3BGRL3Q9H299 93 aa3.07□□□□□ -1.92
UBR1-203ENST00000562173 RSL24D1Q9UHA3 163 aaKnown RBP3.07□□□□□ -1.92
UBR1-203ENST00000562173 GVQW2A0A096LPI5 108 aaPredicted RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 A6NDN8 102 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 GATCO43716 136 aaKnown RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 IFNA7P01567 189 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 MGPP08493 103 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 GCHFRP30047 84 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 RPL12P30050 165 aaKnown RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 FAUP35544 74 aaKnown RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 XCL1P47992 114 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 MEF2BQ02080 365 aaPredicted RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 ZNF726P1Q15940 193 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 KHDC3LQ587J8 217 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 RNASE13Q5GAN3 156 aaKnown RBP3.06□□□□□ -1.92
UBR1-203ENST00000562173 CARD19Q96LW7 228 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 EPDR1Q9UM22 224 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 PHLDA3Q9Y5J5 127 aa3.06□□□□□ -1.92
UBR1-203ENST00000562173 IGLV4-69A0A075B6H9 119 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 SMKR1H3BMG3 65 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 TPT1P13693 172 aaKnown RBP3.05□□□□□ -1.92
UBR1-203ENST00000562173 SULT1A2P50226 295 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 TMBIM6P55061 237 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 IQCJQ1A5X6 159 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 RGS21Q2M5E4 152 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 Q6ZN92 141 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 FAM19A5Q7Z5A7 132 aaPredicted RBP3.05□□□□□ -1.92
UBR1-203ENST00000562173 STX12Q86Y82 276 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 AQP10Q96PS8 301 aa3.05□□□□□ -1.92
UBR1-203ENST00000562173 PRO0461Q9UI25 63 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms