RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 C11orf52Q96A22 123 aa7.09□□□□□ -1.27
NSMCE1-202ENST00000561960 TMEM101Q96IK0 257 aa7.09□□□□□ -1.27
NSMCE1-202ENST00000561960 TSHBP01222 138 aa7.08□□□□□ -1.28
NSMCE1-202ENST00000561960 BTF3L4Q96K17 158 aa7.08□□□□□ -1.28
NSMCE1-202ENST00000561960 CAMK2N2Q96S95 79 aa7.08□□□□□ -1.28
NSMCE1-202ENST00000561960 MED9Q9NWA0 146 aa7.08□□□□□ -1.28
NSMCE1-202ENST00000561960 XKRY2A2RUG3 117 aa7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 K7EN84 100 aa7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 MALP21145 153 aa7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 MEF2BQ02080 365 aaPredicted RBP7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 SS18Q15532 418 aa7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 C5orf38Q86SI9 138 aa7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 NUP35Q8NFH5 326 aa7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 MANBALQ9NQG1 85 aa7.07□□□□□ -1.28
NSMCE1-202ENST00000561960 UMAD1C9J7I0 102 aa7.06□□□□□ -1.28
NSMCE1-202ENST00000561960 SMKR1H3BMG3 65 aa7.06□□□□□ -1.28
NSMCE1-202ENST00000561960 BCL2L11O43521 198 aa7.06□□□□□ -1.28
NSMCE1-202ENST00000561960 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
NSMCE1-202ENST00000561960 ZNF664Q8N3J9 261 aa7.06□□□□□ -1.28
NSMCE1-202ENST00000561960 C9orf62Q8N4C0 152 aa7.06□□□□□ -1.28
NSMCE1-202ENST00000561960 RPP21Q9H633 154 aaKnown RBP7.06□□□□□ -1.28
NSMCE1-202ENST00000561960 A0A087WZ39 114 aa7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 TRAV13-1A0A0B4J241 112 aa7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 I3L3M4 83 aa7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 NCR2O95944 276 aa7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 EIF5AP63241 154 aaKnown RBP7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 CD164L2Q6UWJ8 174 aa7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 MRAP2Q96G30 205 aa7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
NSMCE1-202ENST00000561960 KANTRA0A1W2PQU2 76 aa7.04□□□□□ -1.28
NSMCE1-202ENST00000561960 COX7A2LO14548 114 aa7.04□□□□□ -1.28
NSMCE1-202ENST00000561960 APOMO95445 188 aa7.04□□□□□ -1.28
NSMCE1-202ENST00000561960 TSPAN13O95857 204 aa7.04□□□□□ -1.28
NSMCE1-202ENST00000561960 ZNF25P17030 456 aaPredicted RBP7.04□□□□□ -1.28
NSMCE1-202ENST00000561960 TMA7Q9Y2S6 64 aaKnown RBP7.04□□□□□ -1.28
NSMCE1-202ENST00000561960 H0Y9J4 135 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 H7C423 109 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 ESDP10768 282 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 EIF5AL1Q6IS14 154 aaKnown RBP7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 Q6ZUT4 128 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 SMIM15Q7Z3B0 74 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 OCC1Q8TAD7 63 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 DIRC1Q969H9 104 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 ISOC2Q96AB3 205 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 ST20Q9HBF5 79 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 PKIGQ9Y2B9 76 aa7.03□□□□□ -1.28
NSMCE1-202ENST00000561960 ZNF345Q14585 488 aa7.02□□□□□ -1.29
NSMCE1-202ENST00000561960 GAGE2EQ4V326 116 aa7.02□□□□□ -1.29
NSMCE1-202ENST00000561960 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
NSMCE1-202ENST00000561960 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
NSMCE1-202ENST00000561960 GAGE2DQ9UEU5 116 aa7.02□□□□□ -1.29
NSMCE1-202ENST00000561960 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
NSMCE1-202ENST00000561960 CEBPGP53567 150 aa7.01□□□□□ -1.29
NSMCE1-202ENST00000561960 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
NSMCE1-202ENST00000561960 C7orf77A4D0Y5 90 aa7□□□□□ -1.29
NSMCE1-202ENST00000561960 PDE6DO43924 150 aa7□□□□□ -1.29
NSMCE1-202ENST00000561960 UBE2D1P51668 147 aa7□□□□□ -1.29
NSMCE1-202ENST00000561960 AMN1Q8IY45 258 aa7□□□□□ -1.29
NSMCE1-202ENST00000561960 GATCO43716 136 aaKnown RBP6.99□□□□□ -1.29
NSMCE1-202ENST00000561960 FCER1GP30273 86 aa6.99□□□□□ -1.29
NSMCE1-202ENST00000561960 MRPL52Q86TS9 123 aaKnown RBP6.99□□□□□ -1.29
NSMCE1-202ENST00000561960 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
NSMCE1-202ENST00000561960 TCTE3Q8IZS6 198 aa6.99□□□□□ -1.29
NSMCE1-202ENST00000561960 ORAOV1Q8WV07 137 aa6.99□□□□□ -1.29
NSMCE1-202ENST00000561960 TRBV6-5A0A0K0K1A5 114 aa6.98□□□□□ -1.29
NSMCE1-202ENST00000561960 LOC105371267A0A1B0GV96 52 aa6.98□□□□□ -1.29
NSMCE1-202ENST00000561960 C1orf196B1AJZ1 125 aa6.98□□□□□ -1.29
NSMCE1-202ENST00000561960 UBE2BP63146 152 aa6.98□□□□□ -1.29
NSMCE1-202ENST00000561960 UNQ6190/PRO20217Q6UXQ8 127 aa6.98□□□□□ -1.29
NSMCE1-202ENST00000561960 SMIM12Q96EX1 92 aa6.98□□□□□ -1.29
NSMCE1-202ENST00000561960 BIN3Q9NQY0 253 aa6.98□□□□□ -1.29
NSMCE1-202ENST00000561960 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
NSMCE1-202ENST00000561960 TRAV1-1A0A0B4J248 108 aa6.97□□□□□ -1.29
NSMCE1-202ENST00000561960 POLR2KP53803 58 aaKnown RBP6.97□□□□□ -1.29
NSMCE1-202ENST00000561960 RPL39P62891 51 aaKnown RBP6.97□□□□□ -1.29
NSMCE1-202ENST00000561960 TEX261Q6UWH6 196 aa6.97□□□□□ -1.29
NSMCE1-202ENST00000561960 HMSDA8MTL9 139 aa6.96□□□□□ -1.3
NSMCE1-202ENST00000561960 M0QXV9 152 aa6.96□□□□□ -1.3
NSMCE1-202ENST00000561960 RAB4AP20338 218 aa6.96□□□□□ -1.3
NSMCE1-202ENST00000561960 C2orf48Q96LS8 159 aa6.96□□□□□ -1.3
NSMCE1-202ENST00000561960 RETNLBQ9BQ08 111 aa6.96□□□□□ -1.3
NSMCE1-202ENST00000561960 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
NSMCE1-202ENST00000561960 MUC17Q685J3 4493 aa6.96□□□□□ -1.3
NSMCE1-202ENST00000561960 IGLV1-50A0A075B6I6 118 aa6.95□□□□□ -1.3
NSMCE1-202ENST00000561960 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
NSMCE1-202ENST00000561960 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
NSMCE1-202ENST00000561960 A0A0U1RQV1 116 aa6.94□□□□□ -1.3
NSMCE1-202ENST00000561960 HIGD1CA8MV81 97 aa6.94□□□□□ -1.3
NSMCE1-202ENST00000561960 TEX46H3BTG2 121 aa6.94□□□□□ -1.3
NSMCE1-202ENST00000561960 SLC51BQ86UW2 128 aa6.94□□□□□ -1.3
NSMCE1-202ENST00000561960 BORCS7Q96B45 105 aa6.94□□□□□ -1.3
NSMCE1-202ENST00000561960 A8MWL6 223 aa6.93□□□□□ -1.3
NSMCE1-202ENST00000561960 NDUFA1O15239 70 aa6.93□□□□□ -1.3
NSMCE1-202ENST00000561960 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
NSMCE1-202ENST00000561960 LINC00469Q8N7U9 141 aa6.93□□□□□ -1.3
NSMCE1-202ENST00000561960 NRACQ8N912 160 aa6.93□□□□□ -1.3
NSMCE1-202ENST00000561960 FAM104AQ969W3 186 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms