RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CIRBPQ14011 172 aaKnown RBP6.57□□□□□ -1.36
CLK3-205ENST00000561673 TMEM241Q24JQ0 296 aa6.57□□□□□ -1.36
CLK3-205ENST00000561673 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
CLK3-205ENST00000561673 AMN1Q8IY45 258 aa6.57□□□□□ -1.36
CLK3-205ENST00000561673 V9GYV3 84 aa6.57□□□□□ -1.36
CLK3-205ENST00000561673 C9JQL5 133 aa6.56□□□□□ -1.36
CLK3-205ENST00000561673 ESDP10768 282 aa6.56□□□□□ -1.36
CLK3-205ENST00000561673 POLR2KP53803 58 aaKnown RBP6.56□□□□□ -1.36
CLK3-205ENST00000561673 FOXI1Q12951 378 aa6.56□□□□□ -1.36
CLK3-205ENST00000561673 NUP35Q8NFH5 326 aa6.56□□□□□ -1.36
CLK3-205ENST00000561673 ISOC2Q96AB3 205 aa6.56□□□□□ -1.36
CLK3-205ENST00000561673 DPH3Q96FX2 82 aa6.56□□□□□ -1.36
CLK3-205ENST00000561673 MRAP2Q96G30 205 aa6.56□□□□□ -1.36
CLK3-205ENST00000561673 TMEM242Q9NWH2 141 aa6.56□□□□□ -1.36
CLK3-205ENST00000561673 TRBV27A0A0K0K1C4 114 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 SMKR1H3BMG3 65 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 CHTF8P0CG12 524 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 ZNF25P17030 456 aaPredicted RBP6.55□□□□□ -1.36
CLK3-205ENST00000561673 HNRNPA3P51991 378 aaKnown RBP6.55□□□□□ -1.36
CLK3-205ENST00000561673 RPL23P62829 140 aaKnown RBP6.55□□□□□ -1.36
CLK3-205ENST00000561673 SRSF3P84103 164 aaKnown RBP6.55□□□□□ -1.36
CLK3-205ENST00000561673 RIGQ13278 110 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 HIGD2BQ4VC39 106 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 FAM74A3Q4VXF1 159 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 OR5A1Q8NGJ0 315 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 TMEM101Q96IK0 257 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 HMCN2Q8NDA2 5059 aa6.55□□□□□ -1.36
CLK3-205ENST00000561673 LINC00959A0A1B0GUT2 108 aa6.54□□□□□ -1.36
CLK3-205ENST00000561673 OXTP01178 125 aa6.54□□□□□ -1.36
CLK3-205ENST00000561673 XCL1P47992 114 aa6.54□□□□□ -1.36
CLK3-205ENST00000561673 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
CLK3-205ENST00000561673 BTF3L4Q96K17 158 aa6.54□□□□□ -1.36
CLK3-205ENST00000561673 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
CLK3-205ENST00000561673 A0A087WYN8 130 aa6.53□□□□□ -1.36
CLK3-205ENST00000561673 GVQW2A0A096LPI5 108 aaPredicted RBP6.53□□□□□ -1.36
CLK3-205ENST00000561673 VCYO14598 125 aa6.53□□□□□ -1.36
CLK3-205ENST00000561673 CCL25O15444 150 aa6.53□□□□□ -1.36
CLK3-205ENST00000561673 COX6A2Q02221 97 aa6.53□□□□□ -1.36
CLK3-205ENST00000561673 ADIRFQ15847 76 aa6.53□□□□□ -1.36
CLK3-205ENST00000561673 MRPL52Q86TS9 123 aaKnown RBP6.53□□□□□ -1.36
CLK3-205ENST00000561673 NRACQ8N912 160 aa6.53□□□□□ -1.36
CLK3-205ENST00000561673 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
CLK3-205ENST00000561673 NAT8BQ9UHF3 227 aa6.53□□□□□ -1.36
CLK3-205ENST00000561673 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
CLK3-205ENST00000561673 C7orf77A4D0Y5 90 aa6.52□□□□□ -1.37
CLK3-205ENST00000561673 PPP1R17O96001 155 aa6.52□□□□□ -1.37
CLK3-205ENST00000561673 SUMO2P61956 95 aaKnown RBP6.52□□□□□ -1.37
CLK3-205ENST00000561673 PEA15Q15121 130 aa6.52□□□□□ -1.37
CLK3-205ENST00000561673 FAM104BQ5XKR9 115 aa6.52□□□□□ -1.37
CLK3-205ENST00000561673 ZNF664Q8N3J9 261 aa6.52□□□□□ -1.37
CLK3-205ENST00000561673 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
CLK3-205ENST00000561673 PLAC8Q9NZF1 115 aa6.52□□□□□ -1.37
CLK3-205ENST00000561673 FCER1GP30273 86 aa6.51□□□□□ -1.37
CLK3-205ENST00000561673 SS18Q15532 418 aa6.51□□□□□ -1.37
CLK3-205ENST00000561673 MRPL51Q4U2R6 128 aaKnown RBP6.51□□□□□ -1.37
CLK3-205ENST00000561673 LINC00526Q96FQ7 95 aa6.51□□□□□ -1.37
CLK3-205ENST00000561673 PLA2G2DQ9UNK4 145 aa6.51□□□□□ -1.37
CLK3-205ENST00000561673 IGHV1-58A0A0C4DH39 117 aa6.5□□□□□ -1.37
CLK3-205ENST00000561673 IGKV2-24A0A0C4DH68 120 aa6.5□□□□□ -1.37
CLK3-205ENST00000561673 CAMPP49913 170 aa6.5□□□□□ -1.37
CLK3-205ENST00000561673 MAJINQ3KP22 176 aa6.5□□□□□ -1.37
CLK3-205ENST00000561673 CD164L2Q6UWJ8 174 aa6.5□□□□□ -1.37
CLK3-205ENST00000561673 KIR2DL4Q99706 377 aa6.5□□□□□ -1.37
CLK3-205ENST00000561673 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
CLK3-205ENST00000561673 TNXBP22105 4242 aa6.49□□□□□ -1.37
CLK3-205ENST00000561673 A0A1B0GW15 77 aa6.49□□□□□ -1.37
CLK3-205ENST00000561673 PPP1R2P9O14990 202 aa6.49□□□□□ -1.37
CLK3-205ENST00000561673 UBE2D4Q9Y2X8 147 aa6.49□□□□□ -1.37
CLK3-205ENST00000561673 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
CLK3-205ENST00000561673 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
CLK3-205ENST00000561673 LINC00862A6NCI5 91 aa6.48□□□□□ -1.37
CLK3-205ENST00000561673 C1orf196B1AJZ1 125 aa6.48□□□□□ -1.37
CLK3-205ENST00000561673 PHOX2AO14813 284 aa6.48□□□□□ -1.37
CLK3-205ENST00000561673 CKS2P33552 79 aa6.48□□□□□ -1.37
CLK3-205ENST00000561673 RNASE13Q5GAN3 156 aaKnown RBP6.48□□□□□ -1.37
CLK3-205ENST00000561673 SERTAD4-AS1Q5TG53 156 aa6.48□□□□□ -1.37
CLK3-205ENST00000561673 MRPL54Q6P161 138 aaKnown RBP6.48□□□□□ -1.37
CLK3-205ENST00000561673 STPG4Q8N801 248 aa6.48□□□□□ -1.37
CLK3-205ENST00000561673 C20orf78Q9BR46 151 aa6.48□□□□□ -1.37
CLK3-205ENST00000561673 A0A096LNI7 61 aa6.47□□□□□ -1.37
CLK3-205ENST00000561673 TRAV13-1A0A0B4J241 112 aa6.47□□□□□ -1.37
CLK3-205ENST00000561673 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
CLK3-205ENST00000561673 RPL32P62910 135 aaKnown RBP6.47□□□□□ -1.37
CLK3-205ENST00000561673 SMAGPQ0VAQ4 97 aa6.47□□□□□ -1.37
CLK3-205ENST00000561673 Q6ZRU5 148 aa6.47□□□□□ -1.37
CLK3-205ENST00000561673 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
CLK3-205ENST00000561673 CARD19Q96LW7 228 aa6.47□□□□□ -1.37
CLK3-205ENST00000561673 UBR4Q5T4S7 5183 aa6.47□□□□□ -1.37
CLK3-205ENST00000561673 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 D6R8Y8 96 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 F8W036 122 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 COX7A2LO14548 114 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 RPL39P62891 51 aaKnown RBP6.46□□□□□ -1.38
CLK3-205ENST00000561673 HBBP68871 147 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 SYCNQ0VAF6 134 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 Q6ZUT4 128 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 TMEM18Q96B42 140 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.38
CLK3-205ENST00000561673 IGLV4-69A0A075B6H9 119 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms