RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 IGKV2-29A2NJV5 120 aaPredicted RBP12.29□□□□□ -0.44
PKD1-223ENST00000561668 FGF6P10767 208 aa12.29□□□□□ -0.44
PKD1-223ENST00000561668 NDUFA5Q16718 116 aa12.29□□□□□ -0.44
PKD1-223ENST00000561668 COX19Q49B96 90 aa12.29□□□□□ -0.44
PKD1-223ENST00000561668 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
PKD1-223ENST00000561668 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
PKD1-223ENST00000561668 CSDC2Q9Y534 153 aaKnown RBP12.29□□□□□ -0.44
PKD1-223ENST00000561668 EPM2AB3EWF7 344 aa12.27□□□□□ -0.45
PKD1-223ENST00000561668 KRTAP4-5Q9BYR2 181 aa12.27□□□□□ -0.45
PKD1-223ENST00000561668 RYR1P21817 5038 aa12.27□□□□□ -0.45
PKD1-223ENST00000561668 IGLV10-54A0A075B6I4 117 aa12.26□□□□□ -0.45
PKD1-223ENST00000561668 FCER1GP30273 86 aa12.26□□□□□ -0.45
PKD1-223ENST00000561668 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
PKD1-223ENST00000561668 TIMM21Q9BVV7 248 aa12.26□□□□□ -0.45
PKD1-223ENST00000561668 DNAH5Q8TE73 4624 aa12.26□□□□□ -0.45
PKD1-223ENST00000561668 USP17L23D6RBM5 183 aa12.25□□□□□ -0.45
PKD1-223ENST00000561668 SLC7A5P1Q8MH63 180 aa12.24□□□□□ -0.45
PKD1-223ENST00000561668 TMEM101Q96IK0 257 aa12.24□□□□□ -0.45
PKD1-223ENST00000561668 CDC42SE2Q9NRR3 84 aa12.24□□□□□ -0.45
PKD1-223ENST00000561668 MT-ND6P03923 174 aa12.23□□□□□ -0.45
PKD1-223ENST00000561668 YPEL4Q96NS1 127 aa12.23□□□□□ -0.45
PKD1-223ENST00000561668 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
PKD1-223ENST00000561668 HSPG2P98160 4391 aa12.23□□□□□ -0.45
PKD1-223ENST00000561668 IGKV3OR2-268A0A0C4DH90 116 aa12.22□□□□□ -0.45
PKD1-223ENST00000561668 FAM229AH3BQW9 127 aa12.22□□□□□ -0.45
PKD1-223ENST00000561668 K7EMI3 77 aa12.22□□□□□ -0.45
PKD1-223ENST00000561668 SMR3BP02814 79 aaPredicted RBP12.22□□□□□ -0.45
PKD1-223ENST00000561668 SMAGPQ0VAQ4 97 aa12.22□□□□□ -0.45
PKD1-223ENST00000561668 OR5A1Q8NGJ0 315 aa12.22□□□□□ -0.45
PKD1-223ENST00000561668 TMEM18Q96B42 140 aa12.22□□□□□ -0.45
PKD1-223ENST00000561668 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
PKD1-223ENST00000561668 LINC01620Q4KN68 170 aa12.21□□□□□ -0.45
PKD1-223ENST00000561668 DGAT2L7PQ6IED9 249 aa12.21□□□□□ -0.45
PKD1-223ENST00000561668 Q8N8P6 123 aa12.21□□□□□ -0.45
PKD1-223ENST00000561668 FAM30AQ9NZY2 134 aa12.21□□□□□ -0.45
PKD1-223ENST00000561668 APOBP04114 4563 aaKnown RBP12.2□□□□□ -0.46
PKD1-223ENST00000561668 HAMPP81172 84 aa12.2□□□□□ -0.46
PKD1-223ENST00000561668 ZNF664Q8N3J9 261 aa12.2□□□□□ -0.46
PKD1-223ENST00000561668 FAM104AQ969W3 186 aa12.2□□□□□ -0.46
PKD1-223ENST00000561668 PRSS1P07477 247 aa12.19□□□□□ -0.46
PKD1-223ENST00000561668 ALKBH7Q9BT30 221 aaPredicted RBP12.19□□□□□ -0.46
PKD1-223ENST00000561668 TGIF2-C20orf24A0A0A6YYL0 155 aa12.18□□□□□ -0.46
PKD1-223ENST00000561668 KIAA1644Q3SXP7 199 aa12.18□□□□□ -0.46
PKD1-223ENST00000561668 Q5VSD8 79 aa12.18□□□□□ -0.46
PKD1-223ENST00000561668 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
PKD1-223ENST00000561668 PCLOQ9Y6V0 5065 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 hDV102S1A0JD36 115 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 CCL25O15444 150 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 RAB5AP20339 215 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 RPL39P62891 51 aaKnown RBP12.17□□□□□ -0.46
PKD1-223ENST00000561668 MRPS36P82909 103 aaKnown RBP12.17□□□□□ -0.46
PKD1-223ENST00000561668 CFAP161Q6P656 301 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 SPANXA1Q9NS26 97 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 PYGO1Q9Y3Y4 419 aa12.17□□□□□ -0.46
PKD1-223ENST00000561668 LOC389332A0A1B0GUA5 103 aa12.16□□□□□ -0.46
PKD1-223ENST00000561668 LINC00959A0A1B0GUT2 108 aa12.16□□□□□ -0.46
PKD1-223ENST00000561668 GAGE12HA6NDE8 117 aa12.16□□□□□ -0.46
PKD1-223ENST00000561668 MRPL18Q9H0U6 180 aaKnown RBP12.16□□□□□ -0.46
PKD1-223ENST00000561668 Q6ZSA8 131 aa12.15□□□□□ -0.46
PKD1-223ENST00000561668 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
PKD1-223ENST00000561668 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
PKD1-223ENST00000561668 ORMDL2Q53FV1 153 aa12.14□□□□□ -0.47
PKD1-223ENST00000561668 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.13□□□□□ -0.47
PKD1-223ENST00000561668 FABP9Q0Z7S8 132 aa12.13□□□□□ -0.47
PKD1-223ENST00000561668 NPSP0C0P6 89 aa12.12□□□□□ -0.47
PKD1-223ENST00000561668 INAFM2P0DMQ5 153 aa12.12□□□□□ -0.47
PKD1-223ENST00000561668 FOXI1Q12951 378 aa12.12□□□□□ -0.47
PKD1-223ENST00000561668 SS18Q15532 418 aa12.12□□□□□ -0.47
PKD1-223ENST00000561668 Q6ZUT4 128 aa12.12□□□□□ -0.47
PKD1-223ENST00000561668 C9orf163Q8N9P6 203 aa12.12□□□□□ -0.47
PKD1-223ENST00000561668 CHAC1Q9BUX1 264 aa12.12□□□□□ -0.47
PKD1-223ENST00000561668 SMCO4Q9NRQ5 59 aa12.12□□□□□ -0.47
PKD1-223ENST00000561668 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
PKD1-223ENST00000561668 ABCA13Q86UQ4 5058 aa12.11□□□□□ -0.47
PKD1-223ENST00000561668 C1orf196B1AJZ1 125 aa12.1□□□□□ -0.47
PKD1-223ENST00000561668 G0S2P27469 103 aa12.1□□□□□ -0.47
PKD1-223ENST00000561668 CD164L2Q6UWJ8 174 aa12.1□□□□□ -0.47
PKD1-223ENST00000561668 C2orf66Q6UXQ4 117 aa12.1□□□□□ -0.47
PKD1-223ENST00000561668 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
PKD1-223ENST00000561668 IGIPA6NJ69 53 aa12.09□□□□□ -0.47
PKD1-223ENST00000561668 PLA2G1BP04054 148 aaKnown RBP12.09□□□□□ -0.47
PKD1-223ENST00000561668 XCL1P47992 114 aa12.09□□□□□ -0.47
PKD1-223ENST00000561668 CNBPP62633 177 aaKnown RBP12.09□□□□□ -0.47
PKD1-223ENST00000561668 SCXQ7RTU7 201 aa12.09□□□□□ -0.47
PKD1-223ENST00000561668 DNAH8Q96JB1 4490 aa12.08□□□□□ -0.48
PKD1-223ENST00000561668 IGLV4-3A0A075B6K6 122 aa12.08□□□□□ -0.48
PKD1-223ENST00000561668 CBLN2Q8IUK8 224 aa12.08□□□□□ -0.48
PKD1-223ENST00000561668 C15orf56Q8N910 161 aa12.08□□□□□ -0.48
PKD1-223ENST00000561668 PRSS3P2Q8NHM4 247 aa12.08□□□□□ -0.48
PKD1-223ENST00000561668 DPH3Q96FX2 82 aa12.08□□□□□ -0.48
PKD1-223ENST00000561668 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.48
PKD1-223ENST00000561668 LINC01549A6NIU2 74 aa12.07□□□□□ -0.48
PKD1-223ENST00000561668 RNASE13Q5GAN3 156 aaKnown RBP12.07□□□□□ -0.48
PKD1-223ENST00000561668 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
PKD1-223ENST00000561668 TOMM6Q96B49 74 aa12.07□□□□□ -0.48
PKD1-223ENST00000561668 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
PKD1-223ENST00000561668 CIRBP-AS1Q8TBR5 109 aa12.06□□□□□ -0.48
PKD1-223ENST00000561668 C18orf32Q8TCD1 76 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms