RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 NRACQ8N912 160 aa16.09■□□□□ 0.17
NME3-202ENST00000561637 XCL1P47992 114 aa16.08■□□□□ 0.16
NME3-202ENST00000561637 RIGQ13278 110 aa16.08■□□□□ 0.16
NME3-202ENST00000561637 TRBV27A0A0K0K1C4 114 aa16.07■□□□□ 0.16
NME3-202ENST00000561637 FAM74A3Q4VXF1 159 aa16.07■□□□□ 0.16
NME3-202ENST00000561637 OR5A1Q8NGJ0 315 aa16.07■□□□□ 0.16
NME3-202ENST00000561637 NAT8Q9UHE5 227 aa16.07■□□□□ 0.16
NME3-202ENST00000561637 ZNF25P17030 456 aaPredicted RBP16.06■□□□□ 0.16
NME3-202ENST00000561637 LINC00526Q96FQ7 95 aa16.06■□□□□ 0.16
NME3-202ENST00000561637 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.05■□□□□ 0.16
NME3-202ENST00000561637 LINC00959A0A1B0GUT2 108 aa16.05■□□□□ 0.16
NME3-202ENST00000561637 CCL25O15444 150 aa16.05■□□□□ 0.16
NME3-202ENST00000561637 SPACA4Q8TDM5 124 aa16.05■□□□□ 0.16
NME3-202ENST00000561637 NAT8BQ9UHF3 227 aa16.05■□□□□ 0.16
NME3-202ENST00000561637 RNF213Q63HN8 5207 aa16.04■□□□□ 0.16
NME3-202ENST00000561637 A0A087WYN8 130 aa16.04■□□□□ 0.16
NME3-202ENST00000561637 MRPL51Q4U2R6 128 aaKnown RBP16.04■□□□□ 0.16
NME3-202ENST00000561637 CFAP161Q6P656 301 aa16.04■□□□□ 0.16
NME3-202ENST00000561637 TMEM101Q96IK0 257 aa16.04■□□□□ 0.16
NME3-202ENST00000561637 BTF3L4Q96K17 158 aa16.04■□□□□ 0.16
NME3-202ENST00000561637 GVQW2A0A096LPI5 108 aaPredicted RBP16.03■□□□□ 0.16
NME3-202ENST00000561637 SMIM27A0A1W2PRY6 76 aa16.03■□□□□ 0.16
NME3-202ENST00000561637 CAMPP49913 170 aa16.03■□□□□ 0.16
NME3-202ENST00000561637 COX6A2Q02221 97 aa16.03■□□□□ 0.16
NME3-202ENST00000561637 MRPL52Q86TS9 123 aaKnown RBP16.03■□□□□ 0.16
NME3-202ENST00000561637 PRSS3P2Q8NHM4 247 aa16.03■□□□□ 0.16
NME3-202ENST00000561637 CDC42SE2Q9NRR3 84 aa16.03■□□□□ 0.16
NME3-202ENST00000561637 LRP2P98164 4655 aa16.03■□□□□ 0.16
NME3-202ENST00000561637 C7orf77A4D0Y5 90 aa16.02■□□□□ 0.16
NME3-202ENST00000561637 RNASE13Q5GAN3 156 aaKnown RBP16.02■□□□□ 0.16
NME3-202ENST00000561637 FAM104BQ5XKR9 115 aa16.02■□□□□ 0.16
NME3-202ENST00000561637 MT1HL1P0DM35 61 aa16.01■□□□□ 0.15
NME3-202ENST00000561637 SUMO2P61956 95 aaKnown RBP16.01■□□□□ 0.15
NME3-202ENST00000561637 PEA15Q15121 130 aa16.01■□□□□ 0.15
NME3-202ENST00000561637 DPH3Q96FX2 82 aa16■□□□□ 0.15
NME3-202ENST00000561637 VCYO14598 125 aa15.99■□□□□ 0.15
NME3-202ENST00000561637 FCER1GP30273 86 aa15.99■□□□□ 0.15
NME3-202ENST00000561637 MRPL54Q6P161 138 aaKnown RBP15.99■□□□□ 0.15
NME3-202ENST00000561637 ZNF664Q8N3J9 261 aa15.99■□□□□ 0.15
NME3-202ENST00000561637 IGKV2-24A0A0C4DH68 120 aa15.98■□□□□ 0.15
NME3-202ENST00000561637 TNXBP22105 4242 aa15.97■□□□□ 0.15
NME3-202ENST00000561637 PLAC8Q9NZF1 115 aa15.96■□□□□ 0.15
NME3-202ENST00000561637 UBE2D4Q9Y2X8 147 aa15.96■□□□□ 0.15
NME3-202ENST00000561637 SS18Q15532 418 aa15.95■□□□□ 0.14
NME3-202ENST00000561637 MAJINQ3KP22 176 aa15.95■□□□□ 0.14
NME3-202ENST00000561637 Q6ZUT4 128 aa15.95■□□□□ 0.14
NME3-202ENST00000561637 A0A096LNI7 61 aa15.94■□□□□ 0.14
NME3-202ENST00000561637 A0A1B0GXF2 115 aa15.94■□□□□ 0.14
NME3-202ENST00000561637 IGHV1-58A0A0C4DH39 117 aa15.93■□□□□ 0.14
NME3-202ENST00000561637 CD164L2Q6UWJ8 174 aa15.93■□□□□ 0.14
NME3-202ENST00000561637 D6R8Y8 96 aa15.92■□□□□ 0.14
NME3-202ENST00000561637 CKS2P33552 79 aa15.92■□□□□ 0.14
NME3-202ENST00000561637 KIR2DL4Q99706 377 aa15.92■□□□□ 0.14
NME3-202ENST00000561637 PHOX2AO14813 284 aa15.91■□□□□ 0.14
NME3-202ENST00000561637 TNFRSF6BO95407 300 aa15.91■□□□□ 0.14
NME3-202ENST00000561637 PPP1R17O96001 155 aa15.91■□□□□ 0.14
NME3-202ENST00000561637 NPYP01303 97 aa15.91■□□□□ 0.14
NME3-202ENST00000561637 RPL39P62891 51 aaKnown RBP15.91■□□□□ 0.14
NME3-202ENST00000561637 FAM104AQ969W3 186 aa15.91■□□□□ 0.14
NME3-202ENST00000561637 SMDT1Q9H4I9 107 aa15.91■□□□□ 0.14
NME3-202ENST00000561637 TRAV13-1A0A0B4J241 112 aa15.9■□□□□ 0.14
NME3-202ENST00000561637 PPP1R2P9O14990 202 aa15.9■□□□□ 0.14
NME3-202ENST00000561637 HBBP68871 147 aa15.9■□□□□ 0.14
NME3-202ENST00000561637 TRBV24-1A0A075B6N3 115 aa15.89■□□□□ 0.13
NME3-202ENST00000561637 CARD19Q96LW7 228 aa15.89■□□□□ 0.13
NME3-202ENST00000561637 C20orf78Q9BR46 151 aa15.89■□□□□ 0.13
NME3-202ENST00000561637 A0A1B0GW15 77 aa15.88■□□□□ 0.13
NME3-202ENST00000561637 LINC00862A6NCI5 91 aa15.88■□□□□ 0.13
NME3-202ENST00000561637 STPG4Q8N801 248 aa15.88■□□□□ 0.13
NME3-202ENST00000561637 OPRPNQ99935 248 aaPredicted RBP15.88■□□□□ 0.13
NME3-202ENST00000561637 SMIM2Q9BVW6 85 aa15.88■□□□□ 0.13
NME3-202ENST00000561637 CSDC2Q9Y534 153 aaKnown RBP15.88■□□□□ 0.13
NME3-202ENST00000561637 TCAPO15273 167 aa15.86■□□□□ 0.13
NME3-202ENST00000561637 RPL32P62910 135 aaKnown RBP15.86■□□□□ 0.13
NME3-202ENST00000561637 C5orf38Q86SI9 138 aa15.86■□□□□ 0.13
NME3-202ENST00000561637 IGLV4-69A0A075B6H9 119 aa15.85■□□□□ 0.13
NME3-202ENST00000561637 C1orf196B1AJZ1 125 aa15.85■□□□□ 0.13
NME3-202ENST00000561637 COX7A2LO14548 114 aa15.85■□□□□ 0.13
NME3-202ENST00000561637 SYCNQ0VAF6 134 aa15.85■□□□□ 0.13
NME3-202ENST00000561637 ZNF561-AS1K7EIQ3 104 aa15.84■□□□□ 0.13
NME3-202ENST00000561637 Q6ZRU5 148 aa15.84■□□□□ 0.13
NME3-202ENST00000561637 TIMM21Q9BVV7 248 aa15.84■□□□□ 0.13
NME3-202ENST00000561637 F8W036 122 aa15.82■□□□□ 0.12
NME3-202ENST00000561637 MALP21145 153 aa15.82■□□□□ 0.12
NME3-202ENST00000561637 S100A8P05109 93 aa15.81■□□□□ 0.12
NME3-202ENST00000561637 C7orf33Q8WU49 177 aa15.81■□□□□ 0.12
NME3-202ENST00000561637 PRR3P79522 188 aaKnown RBP15.79■□□□□ 0.12
NME3-202ENST00000561637 SMAGPQ0VAQ4 97 aa15.79■□□□□ 0.12
NME3-202ENST00000561637 TMEM18Q96B42 140 aa15.79■□□□□ 0.12
NME3-202ENST00000561637 TMEM136Q6ZRR5 245 aa15.78■□□□□ 0.12
NME3-202ENST00000561637 PRELID3AQ96N28 172 aa15.78■□□□□ 0.12
NME3-202ENST00000561637 GAGE2BQ13066 116 aa15.77■□□□□ 0.12
NME3-202ENST00000561637 ATP5L2Q7Z4Y8 100 aa15.77■□□□□ 0.12
NME3-202ENST00000561637 ORMDL3Q8N138 153 aa15.77■□□□□ 0.12
NME3-202ENST00000561637 A0A0J9YXV3 536 aa15.76■□□□□ 0.11
NME3-202ENST00000561637 PTTG1IPP53801 180 aa15.76■□□□□ 0.11
NME3-202ENST00000561637 CAMK2N2Q96S95 79 aa15.76■□□□□ 0.11
NME3-202ENST00000561637 SPANXA1Q9NS26 97 aa15.76■□□□□ 0.11
NME3-202ENST00000561637 PPBPP02775 128 aa15.75■□□□□ 0.11
NME3-202ENST00000561637 SPAG11BQ08648 103 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms