RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 BICRAQ9NZM4 1560 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 USF3Q68DE3 2245 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 K7ERU9 68 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 M0R129 80 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 M0R2T5 61 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 TNFP01375 233 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 SPRR1BP22528 89 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 SPRR2AP35326 72 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 B2MP61769 119 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 SMCO1Q147U7 214 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 Q6AWC8 147 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 LZICQ8WZA0 190 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 SMIM3Q9BZL3 60 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 COPZ2Q9P299 210 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 RAPGEF6Q8TEU7 1601 aa-0.39□□□□□ -2.47
HMBOX1-216ENST00000561377 KIF21AQ7Z4S6 1674 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 RIMS1Q86UR5 1692 aaKnown RBP-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 CFTRP13569 1480 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 GRIN2AQ12879 1464 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 PLXNB2O15031 1838 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 ANKRD30AQ9BXX3 1397 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 LOC285095A0A1B0GVY8 99 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 HCG22E2RYF7 251 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 LINC00694P0DN24 101 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 CKS1BP61024 79 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 COPZ1P61923 177 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 S100A7L2Q5SY68 101 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 C10orf128Q5T292 105 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 BAGE2Q86Y30 109 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 TTC9CQ8N5M4 171 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 PAIP2BQ9ULR5 123 aaKnown RBP-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 MYO7BQ6PIF6 2116 aa-0.4□□□□□ -2.47
HMBOX1-216ENST00000561377 TSC2P49815 1807 aa-0.41□□□□□ -2.47
HMBOX1-216ENST00000561377 CEP152O94986 1710 aa-0.41□□□□□ -2.47
HMBOX1-216ENST00000561377 TULP4Q9NRJ4 1543 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 ARHGEF12Q9NZN5 1544 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 TRBV7-4A0A0J9YYF1 115 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 F8VRH5 84 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 KRTAP19-8Q3LI54 63 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 MGST2Q99735 147 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 FXYD6Q9H0Q3 95 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 LINC00472Q9H8W2 130 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 TPT1P8Q9HAU6 139 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 DYNLRB1Q9NP97 96 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 PCNX1Q96RV3 2341 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 NSD3Q9BZ95 1437 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 HIVEP1P15822 2718 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 SBF2Q86WG5 1849 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 LAMA5O15230 3695 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 SETBP1Q9Y6X0 1596 aa-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 KMT2CQ8NEZ4 4911 aaKnown RBP-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 POLA1P09884 1462 aaPredicted RBP-0.41□□□□□ -2.48
HMBOX1-216ENST00000561377 KIAA0556O60303 1618 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 HERC1Q15751 4861 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 DNAJC13O75165 2243 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 KDM5AP29375 1690 aaKnown RBP-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 MYOM1P52179 1685 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 IFNGP01579 166 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 MGPP08493 103 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 COX8AP10176 69 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 RPS25P62851 125 aaKnown RBP-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 AKAP14Q86UN6 197 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 TSTD1Q8NFU3 115 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 PFDN5Q99471 154 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 NDUFA4L2Q9NRX3 87 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 CCDC141Q6ZP82 1450 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 MAGI1Q96QZ7 1491 aaPredicted RBP-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 MYH6P13533 1939 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 HTTP42858 3142 aa-0.42□□□□□ -2.48
HMBOX1-216ENST00000561377 CDK5RAP2Q96SN8 1893 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 NAIPQ13075 1403 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 SMG6Q86US8 1419 aaKnown RBP-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 SYS1-DBNDD2H3BUS1 97 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 DR1Q01658 176 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 WHAMMP3Q1A5X7 153 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 DEFB105AQ8NG35 78 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 TMEM263Q8WUH6 116 aaKnown RBP-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 ANP32BQ92688 251 aaKnown RBP-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 USMG5Q96IX5 58 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 PDCD10Q9BUL8 212 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 SNRNP25Q9BV90 132 aaKnown RBP-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 RERGLQ9H628 205 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 NAA60Q9H7X0 242 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 LINC01558Q9Y6Z2 57 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 EPG5Q9HCE0 2579 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 SPEF2Q9C093 1822 aa-0.43□□□□□ -2.48
HMBOX1-216ENST00000561377 GOLGA4Q13439 2230 aaKnown RBP-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 ARAP2Q8WZ64 1704 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 MYH8P13535 1937 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 TRBV7-3A0A075B6L6 115 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 IGLC7A0M8Q6 106 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 HMGN4O00479 90 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 SFT2D2O95562 160 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 SPRR2EP22531 72 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 RBM3P98179 157 aaKnown RBP-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 SMIM21Q3B7S5 101 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 Q8N8P6 123 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 DPH3Q96FX2 82 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 PPP3R2Q96LZ3 170 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 FAIMQ9NVQ4 179 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms